| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
Click here to switch to the map view.
The map label for this gene is 39995819
Identifier: 39995819
GI number: 39995819
Start: 761254
End: 762849
Strand: Reverse
Name: 39995819
Synonym: GSU0713
Alternate gene names: NA
Gene position: 762849-761254 (Counterclockwise)
Preceding gene: 39995820
Following gene: 39995818
Centisome position: 20.0
GC content: 58.96
Gene sequence:
>1596_bases ATGCACGGGAAGACGCAACAGCCAAACCAAACCTCCCCACGGGTCGACCTGACCGCCATTCTTGAAGTACTGAAGAGCGT CGGCCTTGTTGTTGGGGGCATCGGCGGCGGCGCCATCCTCTTTTTCTGGATCGGCAATGCCATCATCGTGGCACGCCTGC GGGCCTACAACCTCTACGGCGTCGTCCACTACACCGACGAGTACGTTACCGAGGCGGGTTTTCAGTTCTTTCAGGACATC TTCACCTTTTTTCAGGATTGGCGGCTGATCCCCTTCTTTGTCATCCTCATGGCCCTGCTTTTGTTGACGGTTCCCGTCGG TGGGGGCAAAGCCGCTAATGAACGTCCCGCCGGCAAGGGGCGGATCACCCGCTCCGTCTCCCTGATCCTCCGGTATCGGA TCAACTATATTATTTTCCTGACGCTGGCTCTCTCGGCAGCCTTCATCCTCACCTCGGGCTGGTTCGTCAGGAAGCTTTCT TCCGACATCGTGTGCCAGGAACGCGTGCTGGCCGACCTTTCCAAGGACCTGGGAGGGATGGTTCTCATCCTGCTGCCCCG CAAGGGTGCCCTCGAACGGGCCGACGAGTTCCAGCAGCGCTTTTACGAGGAACTGACCTTCGGGGTGGAGCCGACCCTAC ACTGGATGAACTATGCCCTGGCCGAAATCTCACGACGGGAAGGTACGCCGCTTTCTCTGGAGGTGTTCCAGAAGCGGTTC TCCATCCGCGAACCGTCGCCATTCCGCTCAGACGCTGACTTCGAAAAATCGGAGACCTATGTGGCGTTGCGCAACGTCTG GCTGAGCCATGCCCTGCAGCAGCGGCTGAGGGAGCGGGTCAACCTCACCCTCCAGGATTTCCGCAGCCTGCTGAGTGGTC ACCTCACGAGCGAGGGGGACACCTCTTCGCTGGTCCTCATTCCCGCGAACTACGAGCTTGCCGGCGAATCCATGAGACGC CTGACGCGACTGCGGGAGAATATCTCTGCCTTCTTCGTCCCCGGTGATGAGGATACCAGCCGGATATGCACATCCCTCGG CAGCCTGAAACCCATTGCCTTCGGCCAGTTCATGATCTCGTACTCCTTCTGGGTGCTCATCGGCATCCTCGTCTATCTGT TGCTGAACAGTACACGCCTGATCCGTCTCCCCCTCTGGGAGGGGGGCTACTTTGTCGTCATCTTCCTCCTCTTTCTGACT GTGCTCATCACGCTCCCCACCGCCTACGGCCGGTTCAAGTTCGAATTCAAAGTCCAGCGCTTGAAAGACATCGTCTTTAC GGGGGAGGACAAGGGAGTCCACCCCTTGAGGAAAAAACTCGACGAGGCCCGGCAGCGGGGGGCGGAACTCTACATCCTCG GACCGACCAAGGGACGGGAAATCATCATCGGGGCCTTCGAACACCCGGAAGAGGCGGATGCCGGCAGCACCAGGATTATC ATGCTGGAACGCAGCGCCTATAGCTATATGAGCGTGGAACCGGTCAGGCCGGAAAAAATCCCCGGCATCATACGTCTGCT TCGTCAGCAAGCAGGTACGACGAAACATGAGAATGTGGCCCTGGCTGCGGAAAGAGGAGGGGACGGCCCACCATAG
Upstream 100 bases:
>100_bases GTGCGGATCTGCAATGACCTGAAACCGGCATAGACTGCCGGGCGCCCCTCCGGCAATGCGGTGGGGGCGCCCGACACCCT GTTGCACTGCGAGCGTGCCC
Downstream 100 bases:
>100_bases GCCTGAGGAGAAATCATGCGCAAGGGATTGTCTGCCATCGTCGTAGGGATCGCCCTCCTCGGCCTGGACCCGTGCCTTCC GTCCGACGGGGTGCGCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 531; Mature: 531
Protein sequence:
>531_residues MHGKTQQPNQTSPRVDLTAILEVLKSVGLVVGGIGGGAILFFWIGNAIIVARLRAYNLYGVVHYTDEYVTEAGFQFFQDI FTFFQDWRLIPFFVILMALLLLTVPVGGGKAANERPAGKGRITRSVSLILRYRINYIIFLTLALSAAFILTSGWFVRKLS SDIVCQERVLADLSKDLGGMVLILLPRKGALERADEFQQRFYEELTFGVEPTLHWMNYALAEISRREGTPLSLEVFQKRF SIREPSPFRSDADFEKSETYVALRNVWLSHALQQRLRERVNLTLQDFRSLLSGHLTSEGDTSSLVLIPANYELAGESMRR LTRLRENISAFFVPGDEDTSRICTSLGSLKPIAFGQFMISYSFWVLIGILVYLLLNSTRLIRLPLWEGGYFVVIFLLFLT VLITLPTAYGRFKFEFKVQRLKDIVFTGEDKGVHPLRKKLDEARQRGAELYILGPTKGREIIIGAFEHPEEADAGSTRII MLERSAYSYMSVEPVRPEKIPGIIRLLRQQAGTTKHENVALAAERGGDGPP
Sequences:
>Translated_531_residues MHGKTQQPNQTSPRVDLTAILEVLKSVGLVVGGIGGGAILFFWIGNAIIVARLRAYNLYGVVHYTDEYVTEAGFQFFQDI FTFFQDWRLIPFFVILMALLLLTVPVGGGKAANERPAGKGRITRSVSLILRYRINYIIFLTLALSAAFILTSGWFVRKLS SDIVCQERVLADLSKDLGGMVLILLPRKGALERADEFQQRFYEELTFGVEPTLHWMNYALAEISRREGTPLSLEVFQKRF SIREPSPFRSDADFEKSETYVALRNVWLSHALQQRLRERVNLTLQDFRSLLSGHLTSEGDTSSLVLIPANYELAGESMRR LTRLRENISAFFVPGDEDTSRICTSLGSLKPIAFGQFMISYSFWVLIGILVYLLLNSTRLIRLPLWEGGYFVVIFLLFLT VLITLPTAYGRFKFEFKVQRLKDIVFTGEDKGVHPLRKKLDEARQRGAELYILGPTKGREIIIGAFEHPEEADAGSTRII MLERSAYSYMSVEPVRPEKIPGIIRLLRQQAGTTKHENVALAAERGGDGPP >Mature_531_residues MHGKTQQPNQTSPRVDLTAILEVLKSVGLVVGGIGGGAILFFWIGNAIIVARLRAYNLYGVVHYTDEYVTEAGFQFFQDI FTFFQDWRLIPFFVILMALLLLTVPVGGGKAANERPAGKGRITRSVSLILRYRINYIIFLTLALSAAFILTSGWFVRKLS SDIVCQERVLADLSKDLGGMVLILLPRKGALERADEFQQRFYEELTFGVEPTLHWMNYALAEISRREGTPLSLEVFQKRF SIREPSPFRSDADFEKSETYVALRNVWLSHALQQRLRERVNLTLQDFRSLLSGHLTSEGDTSSLVLIPANYELAGESMRR LTRLRENISAFFVPGDEDTSRICTSLGSLKPIAFGQFMISYSFWVLIGILVYLLLNSTRLIRLPLWEGGYFVVIFLLFLT VLITLPTAYGRFKFEFKVQRLKDIVFTGEDKGVHPLRKKLDEARQRGAELYILGPTKGREIIIGAFEHPEEADAGSTRII MLERSAYSYMSVEPVRPEKIPGIIRLLRQQAGTTKHENVALAAERGGDGPP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59971; Mature: 59971
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHGKTQQPNQTSPRVDLTAILEVLKSVGLVVGGIGGGAILFFWIGNAIIVARLRAYNLYG CCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHEEEE VVHYTDEYVTEAGFQFFQDIFTFFQDWRLIPFFVILMALLLLTVPVGGGKAANERPAGKG EEEECHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC RITRSVSLILRYRINYIIFLTLALSAAFILTSGWFVRKLSSDIVCQERVLADLSKDLGGM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCE VLILLPRKGALERADEFQQRFYEELTFGVEPTLHWMNYALAEISRREGTPLSLEVFQKRF EEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH SIREPSPFRSDADFEKSETYVALRNVWLSHALQQRLRERVNLTLQDFRSLLSGHLTSEGD CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCC TSSLVLIPANYELAGESMRRLTRLRENISAFFVPGDEDTSRICTSLGSLKPIAFGQFMIS CCEEEEEECCCCHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHCCCCCHHHHHHHHH YSFWVLIGILVYLLLNSTRLIRLPLWEGGYFVVIFLLFLTVLITLPTAYGRFKFEFKVQR HHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHH LKDIVFTGEDKGVHPLRKKLDEARQRGAELYILGPTKGREIIIGAFEHPEEADAGSTRII HHHHEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCEEEEECCCCCCCCCCCCEEEE MLERSAYSYMSVEPVRPEKIPGIIRLLRQQAGTTKHENVALAAERGGDGPP EEECCCCCEEECCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCC >Mature Secondary Structure MHGKTQQPNQTSPRVDLTAILEVLKSVGLVVGGIGGGAILFFWIGNAIIVARLRAYNLYG CCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHEEEE VVHYTDEYVTEAGFQFFQDIFTFFQDWRLIPFFVILMALLLLTVPVGGGKAANERPAGKG EEEECHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC RITRSVSLILRYRINYIIFLTLALSAAFILTSGWFVRKLSSDIVCQERVLADLSKDLGGM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCE VLILLPRKGALERADEFQQRFYEELTFGVEPTLHWMNYALAEISRREGTPLSLEVFQKRF EEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH SIREPSPFRSDADFEKSETYVALRNVWLSHALQQRLRERVNLTLQDFRSLLSGHLTSEGD CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCC TSSLVLIPANYELAGESMRRLTRLRENISAFFVPGDEDTSRICTSLGSLKPIAFGQFMIS CCEEEEEECCCCHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHCCCCCHHHHHHHHH YSFWVLIGILVYLLLNSTRLIRLPLWEGGYFVVIFLLFLTVLITLPTAYGRFKFEFKVQR HHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHH LKDIVFTGEDKGVHPLRKKLDEARQRGAELYILGPTKGREIIIGAFEHPEEADAGSTRII HHHHEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCEEEEECCCCCCCCCCCCEEEE MLERSAYSYMSVEPVRPEKIPGIIRLLRQQAGTTKHENVALAAERGGDGPP EEECCCCCEEECCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA