| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39995817
Identifier: 39995817
GI number: 39995817
Start: 759654
End: 760661
Strand: Reverse
Name: 39995817
Synonym: GSU0711
Alternate gene names: NA
Gene position: 760661-759654 (Counterclockwise)
Preceding gene: 39995818
Following gene: 39995816
Centisome position: 19.94
GC content: 62.2
Gene sequence:
>1008_bases ATGGGCACAGTCAAAATTACCTCCTGGAACGTGGCGCATCTGGAACGCTTGACCAGAGCGCATCCCACCGCCAAAGAACG CCGTCGACGGGATGCCGTGGTGCGGGAGATCAGGGAGTTGGCGCCCGACATTCTCTGTCTGCTTGAGGGTCCAGCCGGCG AAGCGGGGATCGATCTTGTTGCCAACGACTTGCTGGACGGCGAGTGGGTGGCGGTGAAGGCGGCCGACGGCAACTATGCC ACGAGGGGTGACCAGTGGATATGGTTCCTCGTCCGACAGGATCTGGCGGCCCGGGCATCGCTTCTTCCCGTCGGCACATG GGATGCCTTTGCCGGGGTATCATGGACATGCCATCTGTGGGGCGAATTCACGGAGGGGACACACCGCCACTATCGGCATC CCCAAGTGTTGATTCTGGACTGGAACGGTCTGCGCGTGGAGTTTATCGGCCTGCACCTGAAGAGCAAGTTCATCAACCAG GGAGAGCGGCTCTGGCGCGACGAACGGGAGCGATTCATCCGCGAGGCCCTCACGGCCCGGATCAAGATGGCCACCGAGGC CGCCAACGTCCGCGCGTACATCGACGCCAAATTCCGGCAAGTGGGCAACCCCGCCCTGTTCGTGCTGGGCGACTTCAACG ACGGGCCGGGCAAGGAGTACTTCGAGGAGCAATACCTCTTCTTCGATCTCATCGCCAATATCCAGGGCAACGTCTTTGCC ACGAGCCGGTTCCTTAACCATGGTCTCTTCGACATCCCCGACGAACTCTGCTGGACTGTCCGGTTCAGGGACTTCGTCCA GCCGGACCGGCGCCCCGAGATTCTTCTGGATCACATTCTCTTCACCCAGGGGCTCGTGAACGGCTCTCTGCCGTGGCAGG TGAAGCCCCATGCAGGCAAGGTGGAACACGAGGTGCACGAACTGGCCAACGCCGGGCTCCCCAAGGACAGCCAGACCAGC GATCACCGGCCGGTCTCGCTCCTGGTGACCACCGGGCCGAACCCATGA
Upstream 100 bases:
>100_bases CATCGAGAGAAACTGAAGGCCAAGTGACGCAGGCAGCCGCAAGGGGGACCACTTCCCGGCATTCCGCCGACAGGGTGGCC GCGCGGCACGGAAGGATCCC
Downstream 100 bases:
>100_bases ACGAAAGGAGGCAGCCATGAAGAAGCAGGCACTCATCGCAACCGTCGCGGCGGGGATACTCTCCCTGGTCGCCGGAGTCG CGCCGGCAACGGACCAGGAG
Product: endonuclease/exonuclease/phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 335; Mature: 334
Protein sequence:
>335_residues MGTVKITSWNVAHLERLTRAHPTAKERRRRDAVVREIRELAPDILCLLEGPAGEAGIDLVANDLLDGEWVAVKAADGNYA TRGDQWIWFLVRQDLAARASLLPVGTWDAFAGVSWTCHLWGEFTEGTHRHYRHPQVLILDWNGLRVEFIGLHLKSKFINQ GERLWRDERERFIREALTARIKMATEAANVRAYIDAKFRQVGNPALFVLGDFNDGPGKEYFEEQYLFFDLIANIQGNVFA TSRFLNHGLFDIPDELCWTVRFRDFVQPDRRPEILLDHILFTQGLVNGSLPWQVKPHAGKVEHEVHELANAGLPKDSQTS DHRPVSLLVTTGPNP
Sequences:
>Translated_335_residues MGTVKITSWNVAHLERLTRAHPTAKERRRRDAVVREIRELAPDILCLLEGPAGEAGIDLVANDLLDGEWVAVKAADGNYA TRGDQWIWFLVRQDLAARASLLPVGTWDAFAGVSWTCHLWGEFTEGTHRHYRHPQVLILDWNGLRVEFIGLHLKSKFINQ GERLWRDERERFIREALTARIKMATEAANVRAYIDAKFRQVGNPALFVLGDFNDGPGKEYFEEQYLFFDLIANIQGNVFA TSRFLNHGLFDIPDELCWTVRFRDFVQPDRRPEILLDHILFTQGLVNGSLPWQVKPHAGKVEHEVHELANAGLPKDSQTS DHRPVSLLVTTGPNP >Mature_334_residues GTVKITSWNVAHLERLTRAHPTAKERRRRDAVVREIRELAPDILCLLEGPAGEAGIDLVANDLLDGEWVAVKAADGNYAT RGDQWIWFLVRQDLAARASLLPVGTWDAFAGVSWTCHLWGEFTEGTHRHYRHPQVLILDWNGLRVEFIGLHLKSKFINQG ERLWRDERERFIREALTARIKMATEAANVRAYIDAKFRQVGNPALFVLGDFNDGPGKEYFEEQYLFFDLIANIQGNVFAT SRFLNHGLFDIPDELCWTVRFRDFVQPDRRPEILLDHILFTQGLVNGSLPWQVKPHAGKVEHEVHELANAGLPKDSQTSD HRPVSLLVTTGPNP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38170; Mature: 38039
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTVKITSWNVAHLERLTRAHPTAKERRRRDAVVREIRELAPDILCLLEGPAGEAGIDLV CCEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHH ANDLLDGEWVAVKAADGNYATRGDQWIWFLVRQDLAARASLLPVGTWDAFAGVSWTCHLW HHHCCCCCEEEEEECCCCCCCCCCCEEEEEEHHHHHHHHHCCCCCCCHHHCCCEEEEEEC GEFTEGTHRHYRHPQVLILDWNGLRVEFIGLHLKSKFINQGERLWRDERERFIREALTAR CCCCCCCHHHCCCCEEEEEECCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH IKMATEAANVRAYIDAKFRQVGNPALFVLGDFNDGPGKEYFEEQYLFFDLIANIQGNVFA HHHHHHHCCEEEEEEHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEE TSRFLNHGLFDIPDELCWTVRFRDFVQPDRRPEILLDHILFTQGLVNGSLPWQVKPHAGK EHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCC VEHEVHELANAGLPKDSQTSDHRPVSLLVTTGPNP HHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCC >Mature Secondary Structure GTVKITSWNVAHLERLTRAHPTAKERRRRDAVVREIRELAPDILCLLEGPAGEAGIDLV CEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHH ANDLLDGEWVAVKAADGNYATRGDQWIWFLVRQDLAARASLLPVGTWDAFAGVSWTCHLW HHHCCCCCEEEEEECCCCCCCCCCCEEEEEEHHHHHHHHHCCCCCCCHHHCCCEEEEEEC GEFTEGTHRHYRHPQVLILDWNGLRVEFIGLHLKSKFINQGERLWRDERERFIREALTAR CCCCCCCHHHCCCCEEEEEECCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH IKMATEAANVRAYIDAKFRQVGNPALFVLGDFNDGPGKEYFEEQYLFFDLIANIQGNVFA HHHHHHHCCEEEEEEHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEE TSRFLNHGLFDIPDELCWTVRFRDFVQPDRRPEILLDHILFTQGLVNGSLPWQVKPHAGK EHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCC VEHEVHELANAGLPKDSQTSDHRPVSLLVTTGPNP HHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA