| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is ilvE [H]
Identifier: 39995762
GI number: 39995762
Start: 691898
End: 692971
Strand: Direct
Name: ilvE [H]
Synonym: GSU0656
Alternate gene names: 39995762
Gene position: 691898-692971 (Clockwise)
Preceding gene: 39995759
Following gene: 39995763
Centisome position: 18.14
GC content: 57.73
Gene sequence:
>1074_bases ATGGAAATCAGAGTTGCACCACTTCCCGCTGAGCAGAAGAAGCACAAGGCCACTGACGAAACAGCTCTAGGCTTTGGTCG TCTTTTTACCGACCGGATGCTTGTTGCCGAATGGAAAGTCGGGCAGGGCTGGGTCGATGCGCGAATTGAGCCCTATGCTC CGTTTTCGCTGGATCCTGCCTGTGCGGTATTTCACTATGCCCAGGAGATTTTTGAAGGACTCAAGGCGTATAAGTGGGCG GATGGTTCCATAGCACTCTTTCGCCCTGAAATGAATGCCCGCCGCTTCAATCATTCAGCAGAGCGTCTCTGCATGCCCGA GGTGCCGGAAGATCTTTTCATCGGCGGCATCGAGCAACTGGTGGCGCTCGAGCGCGACTGGATACCGGCCTCCGCGGGGA CTTCCCTGTATATCCGCCCCGCAATGATTGCCGTGGAGCCGGCTCTCGGCGTGAAACCTGCCGATCATTACTACTTTTTT GTGATTCTTTCACCGGTGGGCGCCTATTACGCCTCTGGATTCAATCCGGTGAAAATCATGGTGGAAGACCAGTATGTCCG CGCCGTGCCCGGCGGCACCGGTGAAGCCAAGACAGGCGGCAATTATGCTTCGTCGCTCAGGGCCGGCCTTGAGGCAAAAA AGAAGGGGTTTGACCAGGTCCTCTGGCTTGACGGGGTCCACCGTCGCTACATCGAGGAGGTTGGGGCTATGAATATGCTG TTTGCCTACGGCAAGACCATAGTCACCTCGCCTCTCACGGGCACCATTCTGAACGGCGTTACCCGCGACTCGGTTCTGAA ACTGGCCGCGAGCCGCGGTTACACCATTGAAGAGCGGTTGATTGACGTGAACGATCTCATGGCCGATATTCGTGCCGGCA AGGTGACCGAGGCTTTCGGCAGTGGCACTGCCGCTGTCGTCAGTCCCGTTGGAATCCTGGCGTACAAGGGCGAGAGCGTG ACCGTAGGCGACGGTGGCGTAGGGCCGATCACCCGGGAACTCTATGATACCCTTACCGGCATCCAGACGGGCCGGATTCC CGACACCTTCGGCTGGACCCGCAAAATTGCCTGA
Upstream 100 bases:
>100_bases GCTGGCAGCGCAAAACATCTTGCCGCGTCTGGGATGCTGTGATAAACCGATTTATATAAACTGAGCCGACGCTTGGCGCT GGCTAACGGAGGTCCTGAAG
Downstream 100 bases:
>100_bases TTGTGCCAAGGAAGGCGGCGGCAACGCCGCCTTCCCTTTTTTCGTCACATTCTGTTGCCATGGCAAATATGGAGATTGCT CCGGACACCCTAGCGAAGGT
Product: branched-chain amino acid aminotransferase
Products: NA
Alternate protein names: BCAT 2; Vegetative protein 85; VEG85 [H]
Number of amino acids: Translated: 357; Mature: 357
Protein sequence:
>357_residues MEIRVAPLPAEQKKHKATDETALGFGRLFTDRMLVAEWKVGQGWVDARIEPYAPFSLDPACAVFHYAQEIFEGLKAYKWA DGSIALFRPEMNARRFNHSAERLCMPEVPEDLFIGGIEQLVALERDWIPASAGTSLYIRPAMIAVEPALGVKPADHYYFF VILSPVGAYYASGFNPVKIMVEDQYVRAVPGGTGEAKTGGNYASSLRAGLEAKKKGFDQVLWLDGVHRRYIEEVGAMNML FAYGKTIVTSPLTGTILNGVTRDSVLKLAASRGYTIEERLIDVNDLMADIRAGKVTEAFGSGTAAVVSPVGILAYKGESV TVGDGGVGPITRELYDTLTGIQTGRIPDTFGWTRKIA
Sequences:
>Translated_357_residues MEIRVAPLPAEQKKHKATDETALGFGRLFTDRMLVAEWKVGQGWVDARIEPYAPFSLDPACAVFHYAQEIFEGLKAYKWA DGSIALFRPEMNARRFNHSAERLCMPEVPEDLFIGGIEQLVALERDWIPASAGTSLYIRPAMIAVEPALGVKPADHYYFF VILSPVGAYYASGFNPVKIMVEDQYVRAVPGGTGEAKTGGNYASSLRAGLEAKKKGFDQVLWLDGVHRRYIEEVGAMNML FAYGKTIVTSPLTGTILNGVTRDSVLKLAASRGYTIEERLIDVNDLMADIRAGKVTEAFGSGTAAVVSPVGILAYKGESV TVGDGGVGPITRELYDTLTGIQTGRIPDTFGWTRKIA >Mature_357_residues MEIRVAPLPAEQKKHKATDETALGFGRLFTDRMLVAEWKVGQGWVDARIEPYAPFSLDPACAVFHYAQEIFEGLKAYKWA DGSIALFRPEMNARRFNHSAERLCMPEVPEDLFIGGIEQLVALERDWIPASAGTSLYIRPAMIAVEPALGVKPADHYYFF VILSPVGAYYASGFNPVKIMVEDQYVRAVPGGTGEAKTGGNYASSLRAGLEAKKKGFDQVLWLDGVHRRYIEEVGAMNML FAYGKTIVTSPLTGTILNGVTRDSVLKLAASRGYTIEERLIDVNDLMADIRAGKVTEAFGSGTAAVVSPVGILAYKGESV TVGDGGVGPITRELYDTLTGIQTGRIPDTFGWTRKIA
Specific function: Transaminates branched-chain amino acids and ketoglutarate [H]
COG id: COG0115
COG function: function code EH; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI38176287, Length=345, Percent_Identity=44.0579710144928, Blast_Score=270, Evalue=2e-72, Organism=Homo sapiens, GI296010904, Length=345, Percent_Identity=44.0579710144928, Blast_Score=270, Evalue=2e-72, Organism=Homo sapiens, GI296010906, Length=345, Percent_Identity=44.0579710144928, Blast_Score=269, Evalue=2e-72, Organism=Homo sapiens, GI50658084, Length=348, Percent_Identity=39.6551724137931, Blast_Score=246, Evalue=3e-65, Organism=Homo sapiens, GI296010902, Length=345, Percent_Identity=39.4202898550725, Blast_Score=223, Evalue=3e-58, Organism=Homo sapiens, GI296010900, Length=345, Percent_Identity=39.4202898550725, Blast_Score=223, Evalue=3e-58, Organism=Homo sapiens, GI258614015, Length=286, Percent_Identity=39.5104895104895, Blast_Score=201, Evalue=8e-52, Organism=Escherichia coli, GI48994963, Length=319, Percent_Identity=30.7210031347962, Blast_Score=125, Evalue=5e-30, Organism=Caenorhabditis elegans, GI17568601, Length=359, Percent_Identity=38.9972144846797, Blast_Score=257, Evalue=8e-69, Organism=Caenorhabditis elegans, GI17565728, Length=353, Percent_Identity=35.1274787535411, Blast_Score=194, Evalue=4e-50, Organism=Saccharomyces cerevisiae, GI6322608, Length=376, Percent_Identity=40.9574468085106, Blast_Score=282, Evalue=7e-77, Organism=Saccharomyces cerevisiae, GI6322002, Length=371, Percent_Identity=39.622641509434, Blast_Score=264, Evalue=2e-71, Organism=Drosophila melanogaster, GI24641779, Length=354, Percent_Identity=38.9830508474576, Blast_Score=249, Evalue=2e-66,
Paralogues:
None
Copy number: 2342 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 11,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001544 - InterPro: IPR018300 - InterPro: IPR005786 [H]
Pfam domain/function: PF01063 Aminotran_4 [H]
EC number: =2.6.1.42 [H]
Molecular weight: Translated: 38950; Mature: 38950
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIRVAPLPAEQKKHKATDETALGFGRLFTDRMLVAEWKVGQGWVDARIEPYAPFSLDPA CCEEECCCCCHHHHHCCCCHHHHHHHHHHHHCEEEEEECCCCCEECCCCCCCCCCCCCHH CAVFHYAQEIFEGLKAYKWADGSIALFRPEMNARRFNHSAERLCMPEVPEDLFIGGIEQL HHHHHHHHHHHHHHHHEECCCCCEEEECCCCHHHHHCCCHHHCCCCCCCHHHHHHHHHHH VALERDWIPASAGTSLYIRPAMIAVEPALGVKPADHYYFFVILSPVGAYYASGFNPVKIM HHHHHCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEEEEECCHHHHHHCCCCEEEEE VEDQYVRAVPGGTGEAKTGGNYASSLRAGLEAKKKGFDQVLWLDGVHRRYIEEVGAMNML EECCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHH FAYGKTIVTSPLTGTILNGVTRDSVLKLAASRGYTIEERLIDVNDLMADIRAGKVTEAFG HHHCCHHCCCCCHHHHHHCCCHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHCCCHHHHHC SGTAAVVSPVGILAYKGESVTVGDGGVGPITRELYDTLTGIQTGRIPDTFGWTRKIA CCCHHHHCCCEEEEECCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MEIRVAPLPAEQKKHKATDETALGFGRLFTDRMLVAEWKVGQGWVDARIEPYAPFSLDPA CCEEECCCCCHHHHHCCCCHHHHHHHHHHHHCEEEEEECCCCCEECCCCCCCCCCCCCHH CAVFHYAQEIFEGLKAYKWADGSIALFRPEMNARRFNHSAERLCMPEVPEDLFIGGIEQL HHHHHHHHHHHHHHHHEECCCCCEEEECCCCHHHHHCCCHHHCCCCCCCHHHHHHHHHHH VALERDWIPASAGTSLYIRPAMIAVEPALGVKPADHYYFFVILSPVGAYYASGFNPVKIM HHHHHCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEEEEECCHHHHHHCCCCEEEEE VEDQYVRAVPGGTGEAKTGGNYASSLRAGLEAKKKGFDQVLWLDGVHRRYIEEVGAMNML EECCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHH FAYGKTIVTSPLTGTILNGVTRDSVLKLAASRGYTIEERLIDVNDLMADIRAGKVTEAFG HHHCCHHCCCCCHHHHHHCCCHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHCCCHHHHHC SGTAAVVSPVGILAYKGESVTVGDGGVGPITRELYDTLTGIQTGRIPDTFGWTRKIA CCCHHHHCCCEEEEECCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377; 7934828; 9298659 [H]