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The map label for this gene is yabB [H]

Identifier: 39995743

GI number: 39995743

Start: 674412

End: 675188

Strand: Direct

Name: yabB [H]

Synonym: GSU0637

Alternate gene names: 39995743

Gene position: 674412-675188 (Clockwise)

Preceding gene: 39995742

Following gene: 39995746

Centisome position: 17.68

GC content: 62.42

Gene sequence:

>777_bases
ATGAGTGGCGCCCCGGAGGAAGGGACGGAAACCCTGGATGAGCTCCGGGCTTACGATCTCAAGATTCTCCAGCAACGGGA
CGGCTACCGCTTTTCCCTCGATCCCCTGCTCCTGTGTGCGTTTTCCTGTCTGACAGAGGGGGGACGGGGAATCGACCTGG
GGACTGGCAGCGGCATAATCCCCCTTGTGCTTGCCCGCCGCTGTCCGGGGAGCACCTTCGTTGGGGTCGAGTTCCAGGAA
AGAATGGCGCACCTCGCCGAGCGAAACGTTCACCTCAACGGCCTCGCCGAAAGGATCGCCATCCTGCGGGAAGACGTACT
CGGTCTCCGTCGACGCTTTCCCGTGTCATCCTTTGATCTGGTACTGTCCAACCCTCCCTACCGCAGGAGGGGGACCGGAA
AGATAAGTCCACGGGCCGGTCGGGACGATGCCCGCCACGAATCGACCGCAACCCTGGCCGATTTTCTTGAAAGCGCCAAA
TATCTCGTAAAAACCACGGGCCGGATCTGTTTCATCTATCACCCGGCCCGCCTCCCCGAGCTCATGGCCCACGCTGCAAG
CCTCAAACTCGCCTGTCTGCGCCTTCGGCTCGTACACGGCACCCGCACCGCGCCGGCGCGCATGGCCATGGTGGAGTTCG
CCAAGGGGCGCCGGGGCGACCTTGAGGTCCTGCCGCCTCTTGTTGTGCGAAACGATGACTATACCTACTCGGCAGAAGTT
GCGGAGCTGCTGGGGGAATACGGCCCGGAAGGGGGTTACTCCACGTCGGAGCAATAG

Upstream 100 bases:

>100_bases
TCGGCAAGTACCTGACGCTCACTTCGTTTGCTATTTTCCTCCTGATGGTCGGACGGGAGTGGCTGTTGAGCCGCACGCGG
AGAGGGGGCGGGGAGTGACG

Downstream 100 bases:

>100_bases
TGGCGTTGCATCAGCGAGGCTAGGGCCTCACGGAGCTCCTCATCGTCCATCTGGTCCGTGGTGTCCTCGATAAACCGCTC
TTCGGCGGAACTCAGTTCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 257

Protein sequence:

>258_residues
MSGAPEEGTETLDELRAYDLKILQQRDGYRFSLDPLLLCAFSCLTEGGRGIDLGTGSGIIPLVLARRCPGSTFVGVEFQE
RMAHLAERNVHLNGLAERIAILREDVLGLRRRFPVSSFDLVLSNPPYRRRGTGKISPRAGRDDARHESTATLADFLESAK
YLVKTTGRICFIYHPARLPELMAHAASLKLACLRLRLVHGTRTAPARMAMVEFAKGRRGDLEVLPPLVVRNDDYTYSAEV
AELLGEYGPEGGYSTSEQ

Sequences:

>Translated_258_residues
MSGAPEEGTETLDELRAYDLKILQQRDGYRFSLDPLLLCAFSCLTEGGRGIDLGTGSGIIPLVLARRCPGSTFVGVEFQE
RMAHLAERNVHLNGLAERIAILREDVLGLRRRFPVSSFDLVLSNPPYRRRGTGKISPRAGRDDARHESTATLADFLESAK
YLVKTTGRICFIYHPARLPELMAHAASLKLACLRLRLVHGTRTAPARMAMVEFAKGRRGDLEVLPPLVVRNDDYTYSAEV
AELLGEYGPEGGYSTSEQ
>Mature_257_residues
SGAPEEGTETLDELRAYDLKILQQRDGYRFSLDPLLLCAFSCLTEGGRGIDLGTGSGIIPLVLARRCPGSTFVGVEFQER
MAHLAERNVHLNGLAERIAILREDVLGLRRRFPVSSFDLVLSNPPYRRRGTGKISPRAGRDDARHESTATLADFLESAKY
LVKTTGRICFIYHPARLPELMAHAASLKLACLRLRLVHGTRTAPARMAMVEFAKGRRGDLEVLPPLVVRNDDYTYSAEVA
ELLGEYGPEGGYSTSEQ

Specific function: Unknown

COG id: COG4123

COG function: function code R; Predicted O-methyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082131, Length=164, Percent_Identity=29.2682926829268, Blast_Score=72, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007848 [H]

Pfam domain/function: PF05175 MTS [H]

EC number: NA

Molecular weight: Translated: 28519; Mature: 28388

Theoretical pI: Translated: 7.90; Mature: 7.90

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGAPEEGTETLDELRAYDLKILQQRDGYRFSLDPLLLCAFSCLTEGGRGIDLGTGSGII
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHCCCCEEECCCCCCHH
PLVLARRCPGSTFVGVEFQERMAHLAERNVHLNGLAERIAILREDVLGLRRRFPVSSFDL
HHHHHHCCCCCCEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
VLSNPPYRRRGTGKISPRAGRDDARHESTATLADFLESAKYLVKTTGRICFIYHPARLPE
EECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHH
LMAHAASLKLACLRLRLVHGTRTAPARMAMVEFAKGRRGDLEVLPPLVVRNDDYTYSAEV
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEECCCEEEECCCCCHHHHH
AELLGEYGPEGGYSTSEQ
HHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SGAPEEGTETLDELRAYDLKILQQRDGYRFSLDPLLLCAFSCLTEGGRGIDLGTGSGII
CCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHCCCCEEECCCCCCHH
PLVLARRCPGSTFVGVEFQERMAHLAERNVHLNGLAERIAILREDVLGLRRRFPVSSFDL
HHHHHHCCCCCCEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
VLSNPPYRRRGTGKISPRAGRDDARHESTATLADFLESAKYLVKTTGRICFIYHPARLPE
EECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHH
LMAHAASLKLACLRLRLVHGTRTAPARMAMVEFAKGRRGDLEVLPPLVVRNDDYTYSAEV
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEECCCEEEECCCCCHHHHH
AELLGEYGPEGGYSTSEQ
HHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]