| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39995742
Identifier: 39995742
GI number: 39995742
Start: 672007
End: 674409
Strand: Direct
Name: 39995742
Synonym: GSU0636
Alternate gene names: NA
Gene position: 672007-674409 (Clockwise)
Preceding gene: 39995741
Following gene: 39995743
Centisome position: 17.62
GC content: 63.25
Gene sequence:
>2403_bases ATGGGGGCACTCCTGGCGATCCTCGTGCTCTTTTTCGCCAAGATCCTCTTTACCGGCAAGATCATCAGGGCTCCGGACAT TACCAACGAGTTCTACTGGACCATCAAGCACTACAAGGAAATGGGGTTCCTGGACCTGTTCCGAGTGCATCTCCGGGCCG GCTGGGACTGGCTTACCAACGGCGGGACGACCGAAGGGGGCGGGACCCTGTCGCTCCAGTTCCTTTTCTACCGCAGCCTC ATTTTCTGGCTCTTCCCGGCGCCGGCCAACGTGGCCTGGTTCATCGTGTTCCACCTCTTCGTGGGTGGGGCTGGCACCTA TTTTCTCTGCCGCGCCATCGGCACGGGGCGCGCCGCAGCGCTTCTGGGCGGGCTGATTTTCGCCATCGCGCCGGAAAACG CCTCGCTTATCAATGCGGGACACGCCCAGAAGATCGCCACCATCAGCTTTGCCCCGTGGGCATTCTATTTCCTTGAGCGG GGATACCAGTCCCGGCGGACGATATTCTTCCTCGCCAGTGCCGTGGTGCTGGCCATCCAGTTCTTCAACATGCACTGGCA GATCGCCTTCTATACCTGCCTTGCCATCGGGGCGTACGGCCTGTGCCGGACCGCCGGCATCATCGCGGGTGATCCCGACA GCCGGACGGGTAAGGGGATTGCCCGGCTCGTCGGTCTCAATGCAGTCATCCTCTGCTTTTTCCTTTCCACTGTCGCCATC TCCCTCATCCCCTTGGCCGATTGGTCCAGGGAGACCACCCGCGGCCTCCAGAGCGGGTCGAACCAGGGGCAGGGGGGGCT CCAGGTGGAAGAGGCCATGTCCTGGTCCATGCCGCCGGAGGAGGCTGTCACCTTCGTGATCCCCGGATTTTTCGGTCTGT CCCGCCAGGAAGGGGGCTACGATGATCCCTCTCACGGCACCTACTACTGGGGGCGGATGGTCTTCACCCAGACCACGGAC TACATGGGGCTGCTCCCCTGGCTCCTGGCCCCGCTGCCGTTCATCTTCCGCCGCGACCGGTATGCCTGGCTCGCCTTTGG CGCCGTTGTCGGGGGGCTCTTCTTCTCCTTCGGCAAGTACACCCCTTTTTACTGGCTGCTCTACGAGCACTTCCCCGGTA TCGATCATTTCCGGGTCCCCAAAATGATGCTGTTCGTCACGACCCTGGGGCTCGCGGTCCTCGCGGCCCGGGGAGCCGAC CTCCTGCTGGATGACGAGGTCCGTGCCACATCGGCTTTCAGTCGCTATCTCGCAGGAGCCATCGCCCTTGTTCCGGCGCT CCTGGCCTTGCTCGGCATCACCATGGCCGCGCGTCCCTATGTTATGGATCTCCTGTCACCCATGATCACCCAGCCGACCC GCTTCGAGCAGGGACCGGCCCTGGTGGCCCAGCGGTTGCAGACCATTCAGCGGGAAATCGGCATTGCCGCCGCATTTGCC GCGGTCTACGGCGCCGTGTTGTGGAGCTGGGCACGGGGGTGGTTCTCGCGTCGGGCCCTGCCCTACCTGCTCGTGGGGGT ATTCCTGGTCGATGTGGGGCGGGTGAATGCCAAGTTCATGCTGCTGCAGGATGTGCCGCAGAAGGTCAAGGGCGAGAAAT CGCCGGTGGTGGAGTTCCTTGCCCCCATGCCGAAGACCGGCCGGGTGCTCCCCATCGACGGCAGCGACCCCATGGAATAT GTGAGCCACGGCATTCCGGTCATGTTTACCTCGAATCCCGTGCAGATCGCCCGCTGGCAGGATTTTCTCGAATCCTTCAG CTTTGATTCGGCCATGCCGGATATGATGAATGTCCGCTATCTGGTGCACGATGCCCAACAGTACGAGGACGATCGCCAAG CGCTCGGCCCGCGCTATGTGCCGGTCTTTGCCTCGCCGGACGGTAGCCGGCTGGTGCTGGAAAACCGGGGAGTCCTGCCC AAGGCGTGGCTCGCACCCAGCGCCTTGCTTCTCAGCGATCCACGCCAGATCCTCGGCATCATGCAGCAGCCGTCGTACAA TCCCCGCTCCTTTGCCGTCGTTGAGGAGCAGCCTCCCATCCCCATGCCTCCGCCGATGGCTCAGCCCAAGGGCGATGCGG GCGAGGTGACGGTAACCCGCTACGAGGCCAACGATATCGCCTGTGACGTCAGGGCGGGACGCAACGCCCTGCTGGTGTTG GGCGAGAAGTTCCACGCCGGATGGCGGGCCCGGGTTGATGGAACGCCCACGGAGATTCACCGCGTCAACTACATCCTGCG AGGCGTCTACCTTTCCCCCGGCCGGCACCGGGTCGAGTTCACCTTCGACCCGCTTCCCTTCAAGGTCGGCAAGTACCTGA CGCTCACTTCGTTTGCTATTTTCCTCCTGATGGTCGGACGGGAGTGGCTGTTGAGCCGCACGCGGAGAGGGGGCGGGGAG TGA
Upstream 100 bases:
>100_bases ATTGGCGCGATGCCGCGGCGCGGCTCGACGCTTTCTACGACAACCTGACGAGGAGACGGAACCTAGCGTGACTACCGAAC GAAAAAAAGACCTCCTGCTG
Downstream 100 bases:
>100_bases CGATGAGTGGCGCCCCGGAGGAAGGGACGGAAACCCTGGATGAGCTCCGGGCTTACGATCTCAAGATTCTCCAGCAACGG GACGGCTACCGCTTTTCCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 800; Mature: 799
Protein sequence:
>800_residues MGALLAILVLFFAKILFTGKIIRAPDITNEFYWTIKHYKEMGFLDLFRVHLRAGWDWLTNGGTTEGGGTLSLQFLFYRSL IFWLFPAPANVAWFIVFHLFVGGAGTYFLCRAIGTGRAAALLGGLIFAIAPENASLINAGHAQKIATISFAPWAFYFLER GYQSRRTIFFLASAVVLAIQFFNMHWQIAFYTCLAIGAYGLCRTAGIIAGDPDSRTGKGIARLVGLNAVILCFFLSTVAI SLIPLADWSRETTRGLQSGSNQGQGGLQVEEAMSWSMPPEEAVTFVIPGFFGLSRQEGGYDDPSHGTYYWGRMVFTQTTD YMGLLPWLLAPLPFIFRRDRYAWLAFGAVVGGLFFSFGKYTPFYWLLYEHFPGIDHFRVPKMMLFVTTLGLAVLAARGAD LLLDDEVRATSAFSRYLAGAIALVPALLALLGITMAARPYVMDLLSPMITQPTRFEQGPALVAQRLQTIQREIGIAAAFA AVYGAVLWSWARGWFSRRALPYLLVGVFLVDVGRVNAKFMLLQDVPQKVKGEKSPVVEFLAPMPKTGRVLPIDGSDPMEY VSHGIPVMFTSNPVQIARWQDFLESFSFDSAMPDMMNVRYLVHDAQQYEDDRQALGPRYVPVFASPDGSRLVLENRGVLP KAWLAPSALLLSDPRQILGIMQQPSYNPRSFAVVEEQPPIPMPPPMAQPKGDAGEVTVTRYEANDIACDVRAGRNALLVL GEKFHAGWRARVDGTPTEIHRVNYILRGVYLSPGRHRVEFTFDPLPFKVGKYLTLTSFAIFLLMVGREWLLSRTRRGGGE
Sequences:
>Translated_800_residues MGALLAILVLFFAKILFTGKIIRAPDITNEFYWTIKHYKEMGFLDLFRVHLRAGWDWLTNGGTTEGGGTLSLQFLFYRSL IFWLFPAPANVAWFIVFHLFVGGAGTYFLCRAIGTGRAAALLGGLIFAIAPENASLINAGHAQKIATISFAPWAFYFLER GYQSRRTIFFLASAVVLAIQFFNMHWQIAFYTCLAIGAYGLCRTAGIIAGDPDSRTGKGIARLVGLNAVILCFFLSTVAI SLIPLADWSRETTRGLQSGSNQGQGGLQVEEAMSWSMPPEEAVTFVIPGFFGLSRQEGGYDDPSHGTYYWGRMVFTQTTD YMGLLPWLLAPLPFIFRRDRYAWLAFGAVVGGLFFSFGKYTPFYWLLYEHFPGIDHFRVPKMMLFVTTLGLAVLAARGAD LLLDDEVRATSAFSRYLAGAIALVPALLALLGITMAARPYVMDLLSPMITQPTRFEQGPALVAQRLQTIQREIGIAAAFA AVYGAVLWSWARGWFSRRALPYLLVGVFLVDVGRVNAKFMLLQDVPQKVKGEKSPVVEFLAPMPKTGRVLPIDGSDPMEY VSHGIPVMFTSNPVQIARWQDFLESFSFDSAMPDMMNVRYLVHDAQQYEDDRQALGPRYVPVFASPDGSRLVLENRGVLP KAWLAPSALLLSDPRQILGIMQQPSYNPRSFAVVEEQPPIPMPPPMAQPKGDAGEVTVTRYEANDIACDVRAGRNALLVL GEKFHAGWRARVDGTPTEIHRVNYILRGVYLSPGRHRVEFTFDPLPFKVGKYLTLTSFAIFLLMVGREWLLSRTRRGGGE >Mature_799_residues GALLAILVLFFAKILFTGKIIRAPDITNEFYWTIKHYKEMGFLDLFRVHLRAGWDWLTNGGTTEGGGTLSLQFLFYRSLI FWLFPAPANVAWFIVFHLFVGGAGTYFLCRAIGTGRAAALLGGLIFAIAPENASLINAGHAQKIATISFAPWAFYFLERG YQSRRTIFFLASAVVLAIQFFNMHWQIAFYTCLAIGAYGLCRTAGIIAGDPDSRTGKGIARLVGLNAVILCFFLSTVAIS LIPLADWSRETTRGLQSGSNQGQGGLQVEEAMSWSMPPEEAVTFVIPGFFGLSRQEGGYDDPSHGTYYWGRMVFTQTTDY MGLLPWLLAPLPFIFRRDRYAWLAFGAVVGGLFFSFGKYTPFYWLLYEHFPGIDHFRVPKMMLFVTTLGLAVLAARGADL LLDDEVRATSAFSRYLAGAIALVPALLALLGITMAARPYVMDLLSPMITQPTRFEQGPALVAQRLQTIQREIGIAAAFAA VYGAVLWSWARGWFSRRALPYLLVGVFLVDVGRVNAKFMLLQDVPQKVKGEKSPVVEFLAPMPKTGRVLPIDGSDPMEYV SHGIPVMFTSNPVQIARWQDFLESFSFDSAMPDMMNVRYLVHDAQQYEDDRQALGPRYVPVFASPDGSRLVLENRGVLPK AWLAPSALLLSDPRQILGIMQQPSYNPRSFAVVEEQPPIPMPPPMAQPKGDAGEVTVTRYEANDIACDVRAGRNALLVLG EKFHAGWRARVDGTPTEIHRVNYILRGVYLSPGRHRVEFTFDPLPFKVGKYLTLTSFAIFLLMVGREWLLSRTRRGGGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 89010; Mature: 88878
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGALLAILVLFFAKILFTGKIIRAPDITNEFYWTIKHYKEMGFLDLFRVHLRAGWDWLTN CCHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCHHHCC GGTTEGGGTLSLQFLFYRSLIFWLFPAPANVAWFIVFHLFVGGAGTYFLCRAIGTGRAAA CCCCCCCCEEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHH LLGGLIFAIAPENASLINAGHAQKIATISFAPWAFYFLERGYQSRRTIFFLASAVVLAIQ HHHHHHEEECCCCCCEEECCCCCEEEEEEECHHHHHHHHHCCCCCHHHHHHHHHHHHHHH FFNMHWQIAFYTCLAIGAYGLCRTAGIIAGDPDSRTGKGIARLVGLNAVILCFFLSTVAI HHCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH SLIPLADWSRETTRGLQSGSNQGQGGLQVEEAMSWSMPPEEAVTFVIPGFFGLSRQEGGY HHHCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHCCCCCHHHCEEEEECCCCCCCCCCCCC DDPSHGTYYWGRMVFTQTTDYMGLLPWLLAPLPFIFRRDRYAWLAFGAVVGGLFFSFGKY CCCCCCCEEEEEEEEEECCHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCC TPFYWLLYEHFPGIDHFRVPKMMLFVTTLGLAVLAARGADLLLDDEVRATSAFSRYLAGA CCCEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHH IALVPALLALLGITMAARPYVMDLLSPMITQPTRFEQGPALVAQRLQTIQREIGIAAAFA HHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH AVYGAVLWSWARGWFSRRALPYLLVGVFLVDVGRVNAKFMLLQDVPQKVKGEKSPVVEFL HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEEHHHCHHHHCCCCCCHHHHH APMPKTGRVLPIDGSDPMEYVSHGIPVMFTSNPVQIARWQDFLESFSFDSAMPDMMNVRY CCCCCCCCEEECCCCCHHHHHHCCCCEEECCCCCHHHHHHHHHHHCCCCCCCCHHHHHHH LVHDAQQYEDDRQALGPRYVPVFASPDGSRLVLENRGVLPKAWLAPSALLLSDPRQILGI HHHHHHHHCCHHHHCCCEEEEEEECCCCCEEEEECCCCCCCHHHCCCHHHHCCCHHHHHH MQQPSYNPRSFAVVEEQPPIPMPPPMAQPKGDAGEVTVTRYEANDIACDVRAGRNALLVL HCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEECCCCCEEEEE GEKFHAGWRARVDGTPTEIHRVNYILRGVYLSPGRHRVEFTFDPLPFKVGKYLTLTSFAI ECHHCCCCEEECCCCHHHHHHHHHHHHEEEECCCCEEEEEEECCCCHHHCCHHHHHHHHH FLLMVGREWLLSRTRRGGGE HHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure GALLAILVLFFAKILFTGKIIRAPDITNEFYWTIKHYKEMGFLDLFRVHLRAGWDWLTN CHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCHHHCC GGTTEGGGTLSLQFLFYRSLIFWLFPAPANVAWFIVFHLFVGGAGTYFLCRAIGTGRAAA CCCCCCCCEEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHH LLGGLIFAIAPENASLINAGHAQKIATISFAPWAFYFLERGYQSRRTIFFLASAVVLAIQ HHHHHHEEECCCCCCEEECCCCCEEEEEEECHHHHHHHHHCCCCCHHHHHHHHHHHHHHH FFNMHWQIAFYTCLAIGAYGLCRTAGIIAGDPDSRTGKGIARLVGLNAVILCFFLSTVAI HHCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH SLIPLADWSRETTRGLQSGSNQGQGGLQVEEAMSWSMPPEEAVTFVIPGFFGLSRQEGGY HHHCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHCCCCCHHHCEEEEECCCCCCCCCCCCC DDPSHGTYYWGRMVFTQTTDYMGLLPWLLAPLPFIFRRDRYAWLAFGAVVGGLFFSFGKY CCCCCCCEEEEEEEEEECCHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCC TPFYWLLYEHFPGIDHFRVPKMMLFVTTLGLAVLAARGADLLLDDEVRATSAFSRYLAGA CCCEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHH IALVPALLALLGITMAARPYVMDLLSPMITQPTRFEQGPALVAQRLQTIQREIGIAAAFA HHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH AVYGAVLWSWARGWFSRRALPYLLVGVFLVDVGRVNAKFMLLQDVPQKVKGEKSPVVEFL HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEEHHHCHHHHCCCCCCHHHHH APMPKTGRVLPIDGSDPMEYVSHGIPVMFTSNPVQIARWQDFLESFSFDSAMPDMMNVRY CCCCCCCCEEECCCCCHHHHHHCCCCEEECCCCCHHHHHHHHHHHCCCCCCCCHHHHHHH LVHDAQQYEDDRQALGPRYVPVFASPDGSRLVLENRGVLPKAWLAPSALLLSDPRQILGI HHHHHHHHCCHHHHCCCEEEEEEECCCCCEEEEECCCCCCCHHHCCCHHHHCCCHHHHHH MQQPSYNPRSFAVVEEQPPIPMPPPMAQPKGDAGEVTVTRYEANDIACDVRAGRNALLVL HCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEECCCCCEEEEE GEKFHAGWRARVDGTPTEIHRVNYILRGVYLSPGRHRVEFTFDPLPFKVGKYLTLTSFAI ECHHCCCCEEECCCCHHHHHHHHHHHHEEEECCCCEEEEEEECCCCHHHCCHHHHHHHHH FLLMVGREWLLSRTRRGGGE HHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA