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The map label for this gene is 39995724

Identifier: 39995724

GI number: 39995724

Start: 652996

End: 654081

Strand: Direct

Name: 39995724

Synonym: GSU0617

Alternate gene names: NA

Gene position: 652996-654081 (Clockwise)

Preceding gene: 39995723

Following gene: 39995725

Centisome position: 17.12

GC content: 58.1

Gene sequence:

>1086_bases
ATGAACGTTCTGAAGCTCATCCGCAGGTTCGTCGGTGCGGCCGCCCTGTGCGCCCTGTGCGCCGGTTGCGCAGGACAACA
GGTCCGGGAGGAGCGGCGCTACTTCTGGCCGCCGCTGCCCGAGCGTCCCAGGATCGAATGGCTCGGTGCCTACAGCAGCC
AGAACGACTTCCCGAAGCAGGGATTCGCGTCGTTCATGGCAGCCATTGCCGGAGAAGAACAGGCCATGAGCCTGACCAAG
CCGCTGGATGTCTATGCGGATGGCCAGGACCGGATTTATGTGGCAGATCCGGGACTTCGCGGCGTGGTTGTGTTCAATAT
GAAAGAGCGGAGCGTGTCGATGCTCGGCGGACCCCAGGCGGCTAACCAGTTTAATACCCCGGTTTCGGTCACCGGTGATT
CCCAGGGGAATATTTATGTTTCCGATGCGGAAAAGGGTGGGATACTGATTTTTGACAGATTTGAGGTGCCGCGTCGTTTT
ATCGACACCAAAGCTGCTGTCAAGAGAAACACTGACATCGCCGTGGATGAAAAGGGTCAGAGAATTCTCGTGGTGGATGC
GCGCGAGCACCGGATTGCCATCCTCGACATGCAGGGGGGGCTGCTTTCCGCCTTTGGGAAGCGTGGCATCGAAGACGGCG
AATTCAACTTCCCCGTGGCGGTGGCCATCAATCACAAGGGGGAGATTATCGTGGGCGATGCCATGAACGCCCGGGTTCAG
ATCTTCGATCAGGACGGGAAGTTTCTCCGCAAGTTCGGGCGCCGTGGCGACGGGCCGGCTGATTTCCAGATCATGAAAGG
CGTGGCCGTCGACTCGGAGGATCATATCTATGTGACCGAGGGAAAAGGTCACAAGCTCATTATCTTCGGCACCAACGGCG
AGTATCTTCTCACCGTGGGCGGACTCTACTCCGCCATCACCACCGGCAAGCAGGCCCCCGGCGGATTCGTCATCCCGCAA
GGAGTCTTTATTGACGATAAGGACGTCATTTACGTGGTTGACCAACTCAATCGGCGGTTCCAGGTGTTCCAGTACATCTC
CGACGATTTCCTCAAGCGCAACCCCATCCCGGGATGGCAGGAGTAA

Upstream 100 bases:

>100_bases
GCGGAAGAACGCATGGCATTGTGCCAGATGTGCCATAACAAGTAGACTGGGGCTGGCGGCGTACGATTGCCGGACTATTC
TCATGGAACGAGGTGACCAT

Downstream 100 bases:

>100_bases
TATCAGTTTCATCACCTGCCAGGAGCCTGTCGGACTTGGAAATCGAAGCAAAAACTCGGCTGGGCCAGGGCTGCTTGTGT
CGACTTGTGCAGGTTAATGG

Product: hypothetical protein

Products: NA

Alternate protein names: NHL Repeat-Containing Protein; Peptidylamidoglycolate Lyase; PA14 Domain-Containing Protein; Fibronectin Type III Domain-Containing Protein; SMP-30/Gluconolaconase/LRE Domain Protein; NHL Repeat Domain-Containing Protein; NHL Repeat Protein; PKD Domain Containing Protein; Cell Surface Protein; NHL Repeat Domain Protein; Surface Layer Protein

Number of amino acids: Translated: 361; Mature: 361

Protein sequence:

>361_residues
MNVLKLIRRFVGAAALCALCAGCAGQQVREERRYFWPPLPERPRIEWLGAYSSQNDFPKQGFASFMAAIAGEEQAMSLTK
PLDVYADGQDRIYVADPGLRGVVVFNMKERSVSMLGGPQAANQFNTPVSVTGDSQGNIYVSDAEKGGILIFDRFEVPRRF
IDTKAAVKRNTDIAVDEKGQRILVVDAREHRIAILDMQGGLLSAFGKRGIEDGEFNFPVAVAINHKGEIIVGDAMNARVQ
IFDQDGKFLRKFGRRGDGPADFQIMKGVAVDSEDHIYVTEGKGHKLIIFGTNGEYLLTVGGLYSAITTGKQAPGGFVIPQ
GVFIDDKDVIYVVDQLNRRFQVFQYISDDFLKRNPIPGWQE

Sequences:

>Translated_361_residues
MNVLKLIRRFVGAAALCALCAGCAGQQVREERRYFWPPLPERPRIEWLGAYSSQNDFPKQGFASFMAAIAGEEQAMSLTK
PLDVYADGQDRIYVADPGLRGVVVFNMKERSVSMLGGPQAANQFNTPVSVTGDSQGNIYVSDAEKGGILIFDRFEVPRRF
IDTKAAVKRNTDIAVDEKGQRILVVDAREHRIAILDMQGGLLSAFGKRGIEDGEFNFPVAVAINHKGEIIVGDAMNARVQ
IFDQDGKFLRKFGRRGDGPADFQIMKGVAVDSEDHIYVTEGKGHKLIIFGTNGEYLLTVGGLYSAITTGKQAPGGFVIPQ
GVFIDDKDVIYVVDQLNRRFQVFQYISDDFLKRNPIPGWQE
>Mature_361_residues
MNVLKLIRRFVGAAALCALCAGCAGQQVREERRYFWPPLPERPRIEWLGAYSSQNDFPKQGFASFMAAIAGEEQAMSLTK
PLDVYADGQDRIYVADPGLRGVVVFNMKERSVSMLGGPQAANQFNTPVSVTGDSQGNIYVSDAEKGGILIFDRFEVPRRF
IDTKAAVKRNTDIAVDEKGQRILVVDAREHRIAILDMQGGLLSAFGKRGIEDGEFNFPVAVAINHKGEIIVGDAMNARVQ
IFDQDGKFLRKFGRRGDGPADFQIMKGVAVDSEDHIYVTEGKGHKLIIFGTNGEYLLTVGGLYSAITTGKQAPGGFVIPQ
GVFIDDKDVIYVVDQLNRRFQVFQYISDDFLKRNPIPGWQE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI84993742, Length=222, Percent_Identity=33.7837837837838, Blast_Score=116, Evalue=3e-26,
Organism=Homo sapiens, GI32454739, Length=267, Percent_Identity=31.4606741573034, Blast_Score=106, Evalue=3e-23,
Organism=Homo sapiens, GI32454737, Length=267, Percent_Identity=31.4606741573034, Blast_Score=106, Evalue=3e-23,
Organism=Homo sapiens, GI194248079, Length=264, Percent_Identity=28.7878787878788, Blast_Score=96, Evalue=4e-20,
Organism=Homo sapiens, GI194248081, Length=271, Percent_Identity=28.7822878228782, Blast_Score=96, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI71980713, Length=270, Percent_Identity=30.7407407407407, Blast_Score=105, Evalue=5e-23,
Organism=Caenorhabditis elegans, GI71980716, Length=270, Percent_Identity=30.7407407407407, Blast_Score=105, Evalue=5e-23,
Organism=Caenorhabditis elegans, GI17553622, Length=209, Percent_Identity=30.1435406698565, Blast_Score=99, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17554338, Length=175, Percent_Identity=32, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI221330419, Length=245, Percent_Identity=33.469387755102, Blast_Score=122, Evalue=3e-28,
Organism=Drosophila melanogaster, GI24655386, Length=245, Percent_Identity=33.469387755102, Blast_Score=122, Evalue=3e-28,
Organism=Drosophila melanogaster, GI22024206, Length=245, Percent_Identity=33.469387755102, Blast_Score=122, Evalue=3e-28,
Organism=Drosophila melanogaster, GI221330033, Length=172, Percent_Identity=33.7209302325581, Blast_Score=92, Evalue=5e-19,
Organism=Drosophila melanogaster, GI221330031, Length=172, Percent_Identity=33.7209302325581, Blast_Score=92, Evalue=5e-19,
Organism=Drosophila melanogaster, GI24586266, Length=172, Percent_Identity=33.7209302325581, Blast_Score=92, Evalue=5e-19,
Organism=Drosophila melanogaster, GI24586264, Length=172, Percent_Identity=33.7209302325581, Blast_Score=92, Evalue=5e-19,
Organism=Drosophila melanogaster, GI22026822, Length=172, Percent_Identity=33.7209302325581, Blast_Score=92, Evalue=5e-19,
Organism=Drosophila melanogaster, GI45552407, Length=166, Percent_Identity=33.1325301204819, Blast_Score=81, Evalue=9e-16,
Organism=Drosophila melanogaster, GI19549884, Length=166, Percent_Identity=33.1325301204819, Blast_Score=81, Evalue=9e-16,
Organism=Drosophila melanogaster, GI17136846, Length=166, Percent_Identity=33.1325301204819, Blast_Score=81, Evalue=9e-16,
Organism=Drosophila melanogaster, GI21355671, Length=125, Percent_Identity=33.6, Blast_Score=66, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39934; Mature: 39934

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: PS51125 NHL L=RR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVLKLIRRFVGAAALCALCAGCAGQQVREERRYFWPPLPERPRIEWLGAYSSQNDFPKQ
CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCHH
GFASFMAAIAGEEQAMSLTKPLDVYADGQDRIYVADPGLRGVVVFNMKERSVSMLGGPQA
HHHHHHHHHCCCHHHHHHCCCCEEEECCCCEEEEECCCCCEEEEEEECCCCEEECCCCCC
ANQFNTPVSVTGDSQGNIYVSDAEKGGILIFDRFEVPRRFIDTKAAVKRNTDIAVDEKGQ
CCCCCCCEEEECCCCCCEEEEECCCCCEEEEECCCCCHHHHCCHHHHHCCCCEEEECCCC
RILVVDAREHRIAILDMQGGLLSAFGKRGIEDGEFNFPVAVAINHKGEIIVGDAMNARVQ
EEEEEECCCCEEEEEEECCCHHHHHHHCCCCCCCCCCEEEEEECCCCCEEEECCCCCEEE
IFDQDGKFLRKFGRRGDGPADFQIMKGVAVDSEDHIYVTEGKGHKLIIFGTNGEYLLTVG
EEECCCHHHHHHCCCCCCCCCEEEEECEEECCCCCEEEECCCCCEEEEEECCCCEEEEEC
GLYSAITTGKQAPGGFVIPQGVFIDDKDVIYVVDQLNRRFQVFQYISDDFLKRNPIPGWQ
CHHHHHHCCCCCCCCEECCCCEEECCCCEEEEEHHHCHHHHHHHHHHHHHHHCCCCCCCC
E
C
>Mature Secondary Structure
MNVLKLIRRFVGAAALCALCAGCAGQQVREERRYFWPPLPERPRIEWLGAYSSQNDFPKQ
CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCHH
GFASFMAAIAGEEQAMSLTKPLDVYADGQDRIYVADPGLRGVVVFNMKERSVSMLGGPQA
HHHHHHHHHCCCHHHHHHCCCCEEEECCCCEEEEECCCCCEEEEEEECCCCEEECCCCCC
ANQFNTPVSVTGDSQGNIYVSDAEKGGILIFDRFEVPRRFIDTKAAVKRNTDIAVDEKGQ
CCCCCCCEEEECCCCCCEEEEECCCCCEEEEECCCCCHHHHCCHHHHHCCCCEEEECCCC
RILVVDAREHRIAILDMQGGLLSAFGKRGIEDGEFNFPVAVAINHKGEIIVGDAMNARVQ
EEEEEECCCCEEEEEEECCCHHHHHHHCCCCCCCCCCEEEEEECCCCCEEEECCCCCEEE
IFDQDGKFLRKFGRRGDGPADFQIMKGVAVDSEDHIYVTEGKGHKLIIFGTNGEYLLTVG
EEECCCHHHHHHCCCCCCCCCEEEEECEEECCCCCEEEECCCCCEEEEEECCCCEEEEEC
GLYSAITTGKQAPGGFVIPQGVFIDDKDVIYVVDQLNRRFQVFQYISDDFLKRNPIPGWQ
CHHHHHHCCCCCCCCEECCCCEEECCCCEEEEEHHHCHHHHHHHHHHHHHHHCCCCCCCC
E
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA