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The map label for this gene is recO

Identifier: 39995684

GI number: 39995684

Start: 606305

End: 607036

Strand: Direct

Name: recO

Synonym: GSU0577

Alternate gene names: 39995684

Gene position: 606305-607036 (Clockwise)

Preceding gene: 39995683

Following gene: 39995685

Centisome position: 15.9

GC content: 70.08

Gene sequence:

>732_bases
ATGCATCCCATCCGCTGCGAAGCCGTTGTGCTCGCCACCATGGACTACCGGGAGAGCGACCGGATCGTCACCCTGTTCAC
GCTCTGCCACGGCAAGGTGCGCGGCCTGGCCCGGGGCGCCCGCAAGAGCATGCGGCGCTTCGGGGGCGCCCTGGAGCCCT
TTGCCCGCCTGAGCGTGGAGTTGGTCGTCCGGGAGGGGCTCTCGTCCCTGCGCGGCGTGGACATTGTGACCGTCTATCCC
CGCATCCGGCAGGACCTGGCCGCCATCGGCCACGGCGGGTATGCCGTGGAGCTGGTCGACCGCCTCCTGCCCGACGGGGC
GTCGGTTCCCCGGCTGTTCCGGCTCCTCGTTTCTTACCTGGAGCACCTGGACCAGGGGGGCGCCTCTCCCTCGGATCGGC
GCTTCTTTGAAGCCAATCTGCTGAATATCCTCGGCTACCGCCTTTCCCTCGATGCCTGTGCCGCCTGCGGCGTTGAGTTC
CCCGCCGATGCGGCTCGGCGCGCCGGTGCGGCGGGCACGGTGCTCTGCACTGGTTGCGGCCGCTACGGTGCGCCGCTGTC
GGCGGAGACCGTCCGTCTCCTGCACCGGTGCCTGGGTACCGGGCGGTTCGGCGCCATTGTCTTCCCCCCCGAGCCCCTCG
GGGAAGCGGGGCCACTCCTGGATGGCGCCATCGGGGCCCATCTCGCCCGTCCTCTCAATTCCCTCGCCTTTCTGCGCCAG
TTGACCCCGTGA

Upstream 100 bases:

>100_bases
GGGGATCGTCCTCTCCCGCCTGGGCCTGCGGTAGCCCCTTCGCCGCCGCCCGTTTCCGCGGGGATTGACCGCCGGGGGAC
GGAGGTGGTACGGTTGCCCC

Downstream 100 bases:

>100_bases
ACCCATTGTGCCCGTCGCGGCACCACTGAATCCGCGATTCCGGAAGGCGCGGCTGAACGAATGGGTGCCGGCGCGACGGA
CGCGGGTGCTTCGGGGACGA

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MHPIRCEAVVLATMDYRESDRIVTLFTLCHGKVRGLARGARKSMRRFGGALEPFARLSVELVVREGLSSLRGVDIVTVYP
RIRQDLAAIGHGGYAVELVDRLLPDGASVPRLFRLLVSYLEHLDQGGASPSDRRFFEANLLNILGYRLSLDACAACGVEF
PADAARRAGAAGTVLCTGCGRYGAPLSAETVRLLHRCLGTGRFGAIVFPPEPLGEAGPLLDGAIGAHLARPLNSLAFLRQ
LTP

Sequences:

>Translated_243_residues
MHPIRCEAVVLATMDYRESDRIVTLFTLCHGKVRGLARGARKSMRRFGGALEPFARLSVELVVREGLSSLRGVDIVTVYP
RIRQDLAAIGHGGYAVELVDRLLPDGASVPRLFRLLVSYLEHLDQGGASPSDRRFFEANLLNILGYRLSLDACAACGVEF
PADAARRAGAAGTVLCTGCGRYGAPLSAETVRLLHRCLGTGRFGAIVFPPEPLGEAGPLLDGAIGAHLARPLNSLAFLRQ
LTP
>Mature_243_residues
MHPIRCEAVVLATMDYRESDRIVTLFTLCHGKVRGLARGARKSMRRFGGALEPFARLSVELVVREGLSSLRGVDIVTVYP
RIRQDLAAIGHGGYAVELVDRLLPDGASVPRLFRLLVSYLEHLDQGGASPSDRRFFEANLLNILGYRLSLDACAACGVEF
PADAARRAGAAGTVLCTGCGRYGAPLSAETVRLLHRCLGTGRFGAIVFPPEPLGEAGPLLDGAIGAHLARPLNSLAFLRQ
LTP

Specific function: Involved in DNA repair and recF pathway recombination

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECO_GEOSL (Q74FM9)

Other databases:

- EMBL:   AE017180
- RefSeq:   NP_951635.1
- ProteinModelPortal:   Q74FM9
- GeneID:   2685709
- GenomeReviews:   AE017180_GR
- KEGG:   gsu:GSU0577
- NMPDR:   fig|243231.1.peg.573
- TIGR:   GSU0577
- HOGENOM:   HBG634481
- OMA:   LYCYLER
- ProtClustDB:   CLSK827924
- BioCyc:   GSUL243231:GSU_0577-MONOMER
- HAMAP:   MF_00201
- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717
- TIGRFAMs:   TIGR00613

Pfam domain/function: PF02565 RecO; PF11967 RecO_N; SSF57863 ArfGAP; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 26103; Mature: 26103

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHPIRCEAVVLATMDYRESDRIVTLFTLCHGKVRGLARGARKSMRRFGGALEPFARLSVE
CCCCCEEEEEEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
LVVREGLSSLRGVDIVTVYPRIRQDLAAIGHGGYAVELVDRLLPDGASVPRLFRLLVSYL
HHHHHHHHHHCCCEEEEECHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHH
EHLDQGGASPSDRRFFEANLLNILGYRLSLDACAACGVEFPADAARRAGAAGTVLCTGCG
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCEEEEECCC
RYGAPLSAETVRLLHRCLGTGRFGAIVFPPEPLGEAGPLLDGAIGAHLARPLNSLAFLRQ
CCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LTP
CCC
>Mature Secondary Structure
MHPIRCEAVVLATMDYRESDRIVTLFTLCHGKVRGLARGARKSMRRFGGALEPFARLSVE
CCCCCEEEEEEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
LVVREGLSSLRGVDIVTVYPRIRQDLAAIGHGGYAVELVDRLLPDGASVPRLFRLLVSYL
HHHHHHHHHHCCCEEEEECHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHH
EHLDQGGASPSDRRFFEANLLNILGYRLSLDACAACGVEFPADAARRAGAAGTVLCTGCG
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCEEEEECCC
RYGAPLSAETVRLLHRCLGTGRFGAIVFPPEPLGEAGPLLDGAIGAHLARPLNSLAFLRQ
CCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LTP
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA