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The map label for this gene is 39995655

Identifier: 39995655

GI number: 39995655

Start: 581487

End: 583001

Strand: Reverse

Name: 39995655

Synonym: GSU0548

Alternate gene names: NA

Gene position: 583001-581487 (Counterclockwise)

Preceding gene: 39995657

Following gene: 39995651

Centisome position: 15.29

GC content: 64.82

Gene sequence:

>1515_bases
ATGAACGTTCTCCTCGTCTACCCCCGCTATCCGGATTCCTTCTGGAGCTTCCGCCACGCCCTGAAATTCGTCGGCAAGAA
GGCCGCCTTCCCGCCCCTGGGGCTCCTTACCGTTGCCGCTCTCTTCCCCGACACCTGGCAGGCACGCCTGATTGACCAGA
ATGTCCGGGAAGTGACCGATGCCGATCTCGCCCGGGCCGATCTCATTTTCGTGAGCGCCATGACCATCCAGCGGGATGCG
GTGCGGGAAATCCTCTGTCGCTGCCGGCAACTGGGGGTCACCACGGTGGCCGGGGGGCCCCTCTTCACTACCGCGCCGGA
GGAGTTTCCCGAGGCGGACCACCTGGTGCTCAACGAGGCCGAGCTCACCCTCCCGCGGTTTCTGGACGACCTGGCCATGG
ACCGCGCCCAGCGTATCTATACTACCGAGGCACGGGCCGACGTGACCCGGACCCCGCTGCCACGGTGGGATATCCTGGAC
ATCCGGGATTACGCGGCCATGAACATCCAGTATTCCCGGGGCTGCCCCTTTGACTGCGAGTTTTGCGACATCACCCGGCT
CTTCGGCCGCAGGCCGCGCACCAAGGGCCGGGAGCAGTTGACGGCGGAACTGGACAGCCTCCATGCCCGCGGCTGGCAGG
GGGGTGTTTTCTTCGTGGACGACAACTTCATCGGCGACCGGGCAAAGCTGAAACGGGAAGTGCTTCCCGCCATGGTCGAC
TGGCAGGAGCAGCGGAGACGGCCCTTCTCTTTCTTCACCGAGTCCTCCATCGACCTGGCCGACGATCCCGAGCTCATGGG
GCTCATGGTGCGGGCGGGGTTCACGGAGGTCTTTGTGGGCATCGAGACCCCCCACGACGAGGGGCTCCACGAGAGCGGCA
AGGTTCAGAACCGCAACCGCGACCTGCTGGAAAGCGTCAAACGGATCCAGCGGGCGGGACTCCAGGTGCAGGGAGGATTC
ATCGTCGGCTTTGACAGCGACCCGGAGACGATCTTCGAGCGGCAGATCCGCTTCATCCAGGAGAGCGGCATCGTGACCGC
CATGGTCGGAATGCTCACCGCCCTGCGGGGGACCAGGCTTCACCGGCGTCTTGCACAGGAGGGACGGCTGCTGCGGAACG
CCTCGGGCAACAATACCGCCATTGCCCTCAACTTCGTCCCCCGGATGCCGGCGGATGCGCTCGTCGGCGGTTACCGGAAA
ATTCTCGACACCATCTATGCCCCACGGCACTACTACCGCCGGGTCATCACCTTCCTCACGGAGTACCGGACCCCGCCGGG
GGGGTTCCAGCCGAATCCGGCCCGACTGCGGGCGTTCCTGGCGTCGGTGGTGTTGCTGGGGGTGATCGGGAGGGAGCGCC
TCTACTACTGGAAACTCTTCTTCTGGTCACTGGCGCGGCGGCCACGGCTCTTTCCCCTGGCGATCACCCTGGCCATCTAC
GGCTTTCACTTCCGAAAGGTGGCGGAGAGCATCGGTGCCACCGGCATGTTCGAGGAACAGGAATGCGTCGAGTGA

Upstream 100 bases:

>100_bases
TTTACAGAAAAATTACGCGGGCGCCGGTGGAGAAGGAGTAAAATTTACCCAATCGAGCCGTCCCCACCCGACGGGAAACT
CATGGATCACGGAGGATCCC

Downstream 100 bases:

>100_bases
GTCGACGGGGCGCGGTGCGCCTTACCGCAGCGTCACCACCGTGGCGCCCTCGCCACCTTCGAAGGGCTCGCCGGGACGAA
ACTCGCGCACCAGGGGGTGA

Product: radical SAM protein

Products: NA

Alternate protein names: ORF N [H]

Number of amino acids: Translated: 504; Mature: 504

Protein sequence:

>504_residues
MNVLLVYPRYPDSFWSFRHALKFVGKKAAFPPLGLLTVAALFPDTWQARLIDQNVREVTDADLARADLIFVSAMTIQRDA
VREILCRCRQLGVTTVAGGPLFTTAPEEFPEADHLVLNEAELTLPRFLDDLAMDRAQRIYTTEARADVTRTPLPRWDILD
IRDYAAMNIQYSRGCPFDCEFCDITRLFGRRPRTKGREQLTAELDSLHARGWQGGVFFVDDNFIGDRAKLKREVLPAMVD
WQEQRRRPFSFFTESSIDLADDPELMGLMVRAGFTEVFVGIETPHDEGLHESGKVQNRNRDLLESVKRIQRAGLQVQGGF
IVGFDSDPETIFERQIRFIQESGIVTAMVGMLTALRGTRLHRRLAQEGRLLRNASGNNTAIALNFVPRMPADALVGGYRK
ILDTIYAPRHYYRRVITFLTEYRTPPGGFQPNPARLRAFLASVVLLGVIGRERLYYWKLFFWSLARRPRLFPLAITLAIY
GFHFRKVAESIGATGMFEEQECVE

Sequences:

>Translated_504_residues
MNVLLVYPRYPDSFWSFRHALKFVGKKAAFPPLGLLTVAALFPDTWQARLIDQNVREVTDADLARADLIFVSAMTIQRDA
VREILCRCRQLGVTTVAGGPLFTTAPEEFPEADHLVLNEAELTLPRFLDDLAMDRAQRIYTTEARADVTRTPLPRWDILD
IRDYAAMNIQYSRGCPFDCEFCDITRLFGRRPRTKGREQLTAELDSLHARGWQGGVFFVDDNFIGDRAKLKREVLPAMVD
WQEQRRRPFSFFTESSIDLADDPELMGLMVRAGFTEVFVGIETPHDEGLHESGKVQNRNRDLLESVKRIQRAGLQVQGGF
IVGFDSDPETIFERQIRFIQESGIVTAMVGMLTALRGTRLHRRLAQEGRLLRNASGNNTAIALNFVPRMPADALVGGYRK
ILDTIYAPRHYYRRVITFLTEYRTPPGGFQPNPARLRAFLASVVLLGVIGRERLYYWKLFFWSLARRPRLFPLAITLAIY
GFHFRKVAESIGATGMFEEQECVE
>Mature_504_residues
MNVLLVYPRYPDSFWSFRHALKFVGKKAAFPPLGLLTVAALFPDTWQARLIDQNVREVTDADLARADLIFVSAMTIQRDA
VREILCRCRQLGVTTVAGGPLFTTAPEEFPEADHLVLNEAELTLPRFLDDLAMDRAQRIYTTEARADVTRTPLPRWDILD
IRDYAAMNIQYSRGCPFDCEFCDITRLFGRRPRTKGREQLTAELDSLHARGWQGGVFFVDDNFIGDRAKLKREVLPAMVD
WQEQRRRPFSFFTESSIDLADDPELMGLMVRAGFTEVFVGIETPHDEGLHESGKVQNRNRDLLESVKRIQRAGLQVQGGF
IVGFDSDPETIFERQIRFIQESGIVTAMVGMLTALRGTRLHRRLAQEGRLLRNASGNNTAIALNFVPRMPADALVGGYRK
ILDTIYAPRHYYRRVITFLTEYRTPPGGFQPNPARLRAFLASVVLLGVIGRERLYYWKLFFWSLARRPRLFPLAITLAIY
GFHFRKVAESIGATGMFEEQECVE

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006158
- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 57549; Mature: 57549

Theoretical pI: Translated: 8.55; Mature: 8.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVLLVYPRYPDSFWSFRHALKFVGKKAAFPPLGLLTVAALFPDTWQARLIDQNVREVTD
CCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH
ADLARADLIFVSAMTIQRDAVREILCRCRQLGVTTVAGGPLFTTAPEEFPEADHLVLNEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEECCCCHHCCCCCCEEECCH
ELTLPRFLDDLAMDRAQRIYTTEARADVTRTPLPRWDILDIRDYAAMNIQYSRGCPFDCE
HHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCEEECCCHHEEEEEECCCCCCCCC
FCDITRLFGRRPRTKGREQLTAELDSLHARGWQGGVFFVDDNFIGDRAKLKREVLPAMVD
HHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCC
WQEQRRRPFSFFTESSIDLADDPELMGLMVRAGFTEVFVGIETPHDEGLHESGKVQNRNR
HHHHHCCCCEECCCCCCCCCCCHHHHHHHHHCCHHHEEEEECCCCCCCCCCCCCCCCCCH
DLLESVKRIQRAGLQVQGGFIVGFDSDPETIFERQIRFIQESGIVTAMVGMLTALRGTRL
HHHHHHHHHHHCCCEEECCEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
HRRLAQEGRLLRNASGNNTAIALNFVPRMPADALVGGYRKILDTIYAPRHYYRRVITFLT
HHHHHHHCCEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
EYRTPPGGFQPNPARLRAFLASVVLLGVIGRERLYYWKLFFWSLARRPRLFPLAITLAIY
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
GFHFRKVAESIGATGMFEEQECVE
HHHHHHHHHHHCCCCCCCHHHHCC
>Mature Secondary Structure
MNVLLVYPRYPDSFWSFRHALKFVGKKAAFPPLGLLTVAALFPDTWQARLIDQNVREVTD
CCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH
ADLARADLIFVSAMTIQRDAVREILCRCRQLGVTTVAGGPLFTTAPEEFPEADHLVLNEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEECCCCHHCCCCCCEEECCH
ELTLPRFLDDLAMDRAQRIYTTEARADVTRTPLPRWDILDIRDYAAMNIQYSRGCPFDCE
HHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCEEECCCHHEEEEEECCCCCCCCC
FCDITRLFGRRPRTKGREQLTAELDSLHARGWQGGVFFVDDNFIGDRAKLKREVLPAMVD
HHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCC
WQEQRRRPFSFFTESSIDLADDPELMGLMVRAGFTEVFVGIETPHDEGLHESGKVQNRNR
HHHHHCCCCEECCCCCCCCCCCHHHHHHHHHCCHHHEEEEECCCCCCCCCCCCCCCCCCH
DLLESVKRIQRAGLQVQGGFIVGFDSDPETIFERQIRFIQESGIVTAMVGMLTALRGTRL
HHHHHHHHHHHCCCEEECCEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
HRRLAQEGRLLRNASGNNTAIALNFVPRMPADALVGGYRKILDTIYAPRHYYRRVITFLT
HHHHHHHCCEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
EYRTPPGGFQPNPARLRAFLASVVLLGVIGRERLYYWKLFFWSLARRPRLFPLAITLAIY
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
GFHFRKVAESIGATGMFEEQECVE
HHHHHHHHHHHCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231; 8467083 [H]