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The map label for this gene is yeaY [H]

Identifier: 39995650

GI number: 39995650

Start: 576489

End: 576986

Strand: Reverse

Name: yeaY [H]

Synonym: GSU0543

Alternate gene names: 39995650

Gene position: 576986-576489 (Counterclockwise)

Preceding gene: 39995651

Following gene: 39995646

Centisome position: 15.13

GC content: 63.45

Gene sequence:

>498_bases
ATGCCGATACGGTTGCTGTTCGTTCTGGTCATTGCCTGCACCCTGGCCGGTTGCGCCCGGCAGGTCATCAGCCGGGAGTC
CCTCCTTCTGGCTGAACGGAGCCTGTCCTTTGCCGTGGTGCGGGAGAACCCCAACGCATACATGGGGCGTCACCTCCTGC
TGGGAGGGGCGGTGGCCGAAACGGCAAACCGGCCCGATGGAGCAGAACTGGAAGTGGTCCAGTTTTCTCTGGACTCCGAC
GACCGGCCCCAGGAGAAACACGGGTCCGAAGGGCGTTTCCTCGCCCGCAGCCGCGAATTTCTCGACCCGCTGATCTTCAG
CCGGGGAAGGCTCGTGACTCTGGTGGGAACGGTGACCGGCGTGACGGAACGGCGCCTCGACGGAACCAGCTACCGTTATC
CGGTGATTGCTATCAGGGAGATGTACGTCTGGAGACCTGAGGATCCCTATGCCCAGCCGGCGGTGCACTTCGGCATAGGG
GTGGGGGTAGGGTTCTGA

Upstream 100 bases:

>100_bases
CACCATCTGTCCAGGCGGCGGGATTTCTTCACCACCATCGTGCCGGTGGGAAACGGCGTGCTCCTGGGCTACCGCCTCAG
TTGAAGGAAAGGGGCGCATC

Downstream 100 bases:

>100_bases
CCGCGGCCTGGACCGCCGGCAGCGCTATTTCACGACAACCTTGTTCTTGCCGGTGTACTTGGCCTGCATGAGACACTCGT
CGGCCAGGCGGACCAGCTCT

Product: Slp family outer membrane lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MPIRLLFVLVIACTLAGCARQVISRESLLLAERSLSFAVVRENPNAYMGRHLLLGGAVAETANRPDGAELEVVQFSLDSD
DRPQEKHGSEGRFLARSREFLDPLIFSRGRLVTLVGTVTGVTERRLDGTSYRYPVIAIREMYVWRPEDPYAQPAVHFGIG
VGVGF

Sequences:

>Translated_165_residues
MPIRLLFVLVIACTLAGCARQVISRESLLLAERSLSFAVVRENPNAYMGRHLLLGGAVAETANRPDGAELEVVQFSLDSD
DRPQEKHGSEGRFLARSREFLDPLIFSRGRLVTLVGTVTGVTERRLDGTSYRYPVIAIREMYVWRPEDPYAQPAVHFGIG
VGVGF
>Mature_164_residues
PIRLLFVLVIACTLAGCARQVISRESLLLAERSLSFAVVRENPNAYMGRHLLLGGAVAETANRPDGAELEVVQFSLDSDD
RPQEKHGSEGRFLARSREFLDPLIFSRGRLVTLVGTVTGVTERRLDGTSYRYPVIAIREMYVWRPEDPYAQPAVHFGIGV
GVGF

Specific function: Unknown

COG id: COG3065

COG function: function code M; Starvation-inducible outer membrane lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788108, Length=160, Percent_Identity=29.375, Blast_Score=68, Evalue=4e-13,
Organism=Escherichia coli, GI87082278, Length=139, Percent_Identity=27.3381294964029, Blast_Score=64, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004658 [H]

Pfam domain/function: PF03843 Slp [H]

EC number: NA

Molecular weight: Translated: 18289; Mature: 18158

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIRLLFVLVIACTLAGCARQVISRESLLLAERSLSFAVVRENPNAYMGRHLLLGGAVAE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHCCCCEECCHHHH
TANRPDGAELEVVQFSLDSDDRPQEKHGSEGRFLARSREFLDPLIFSRGRLVTLVGTVTG
CCCCCCCCEEEEEEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEHHHC
VTERRLDGTSYRYPVIAIREMYVWRPEDPYAQPAVHFGIGVGVGF
HHHHCCCCCCCCCCEEEEEEEEEECCCCCCCCCCEEEEEEECCCC
>Mature Secondary Structure 
PIRLLFVLVIACTLAGCARQVISRESLLLAERSLSFAVVRENPNAYMGRHLLLGGAVAE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHCCCCEECCHHHH
TANRPDGAELEVVQFSLDSDDRPQEKHGSEGRFLARSREFLDPLIFSRGRLVTLVGTVTG
CCCCCCCCEEEEEEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEHHHC
VTERRLDGTSYRYPVIAIREMYVWRPEDPYAQPAVHFGIGVGVGF
HHHHCCCCCCCCCCEEEEEEEEEECCCCCCCCCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]