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The map label for this gene is yfhP [C]

Identifier: 39995641

GI number: 39995641

Start: 566814

End: 567278

Strand: Direct

Name: yfhP [C]

Synonym: GSU0534

Alternate gene names: 39995641

Gene position: 566814-567278 (Clockwise)

Preceding gene: 39995640

Following gene: 39995642

Centisome position: 14.86

GC content: 58.28

Gene sequence:

>465_bases
ATGAAGCTCTCAACGAAAAGCCGGTACGGGCTTCGGGCTATTTTCGACATTGCGTACAATTCGGGGTCCCTGCCGGCGCA
GGTGCAGGACATATCCCGGCGCCAGGGCATTTCACCCCGTTATCTGGAGCAGATCTTCCAGGGGCTCAAGCGGGCCGGCA
TCCTCAAGAGCAAGAGGGGTCCCCAGGGGGGGTACTGCCTGGCCAAAAAGCCGGAAGAGATCACCGTTGCCGACGTGCTT
CTCGCCACCGAGCGCGATATCAATCTGGTTGAGTGTACCAGCAAGAGAAAGAAAAAAGGGGAATGTACCTTTGACGGGAC
CTGCGTGACCCAGGAGCTCTGGTGCGAGGCGGGAGCGAAGCTCCTTGATTTCTTCTCGGGCTTCACGGTCAAGGATCTGT
GCGACCGGGGACAGCAGATGGGGGTCAAGCGGGAGCAGGATCACCGGTTCATGTACTTTATCTGA

Upstream 100 bases:

>100_bases
TTTACGGGAATGTAGTGGTGTATGGTTTTGTGTTCTTGACAAGGTGAGTAGCAGAATGTTATAGTTGGCATCACGTAGAC
ACTAAGGCGAAGGGGGGATT

Downstream 100 bases:

>100_bases
CATGCGGGAAGGAGACATTCATGCCGCTACTAACCAACGACAAGGTAATCGAGCAGATCGGCAATACCCCTCTCCTGAGA
CTGGCAAAGCTTGAGCGAAA

Product: Rrf2 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MKLSTKSRYGLRAIFDIAYNSGSLPAQVQDISRRQGISPRYLEQIFQGLKRAGILKSKRGPQGGYCLAKKPEEITVADVL
LATERDINLVECTSKRKKKGECTFDGTCVTQELWCEAGAKLLDFFSGFTVKDLCDRGQQMGVKREQDHRFMYFI

Sequences:

>Translated_154_residues
MKLSTKSRYGLRAIFDIAYNSGSLPAQVQDISRRQGISPRYLEQIFQGLKRAGILKSKRGPQGGYCLAKKPEEITVADVL
LATERDINLVECTSKRKKKGECTFDGTCVTQELWCEAGAKLLDFFSGFTVKDLCDRGQQMGVKREQDHRFMYFI
>Mature_154_residues
MKLSTKSRYGLRAIFDIAYNSGSLPAQVQDISRRQGISPRYLEQIFQGLKRAGILKSKRGPQGGYCLAKKPEEITVADVL
LATERDINLVECTSKRKKKGECTFDGTCVTQELWCEAGAKLLDFFSGFTVKDLCDRGQQMGVKREQDHRFMYFI

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788880, Length=149, Percent_Identity=35.5704697986577, Blast_Score=99, Evalue=2e-22,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010242
- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 17439; Mature: 17439

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: PS01332 UPF0074

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSTKSRYGLRAIFDIAYNSGSLPAQVQDISRRQGISPRYLEQIFQGLKRAGILKSKRG
CCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCC
PQGGYCLAKKPEEITVADVLLATERDINLVECTSKRKKKGECTFDGTCVTQELWCEAGAK
CCCCEEECCCCCCCHHHHHHHHCCCCCCCEECCCHHCCCCCCCCCCCHHHHHHHHHHHHH
LLDFFSGFTVKDLCDRGQQMGVKREQDHRFMYFI
HHHHHCCCCHHHHHHHHHHCCCCCCCCCEEEEEC
>Mature Secondary Structure
MKLSTKSRYGLRAIFDIAYNSGSLPAQVQDISRRQGISPRYLEQIFQGLKRAGILKSKRG
CCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCC
PQGGYCLAKKPEEITVADVLLATERDINLVECTSKRKKKGECTFDGTCVTQELWCEAGAK
CCCCEEECCCCCCCHHHHHHHHCCCCCCCEECCCHHCCCCCCCCCCCHHHHHHHHHHHHH
LLDFFSGFTVKDLCDRGQQMGVKREQDHRFMYFI
HHHHHCCCCHHHHHHHHHHCCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9582371 [H]