Click here to switch to the map view.

The map label for this gene is 39995611

Identifier: 39995611

GI number: 39995611

Start: 536521

End: 536880

Strand: Direct

Name: 39995611

Synonym: GSU0504

Alternate gene names: NA

Gene position: 536521-536880 (Clockwise)

Preceding gene: 39995610

Following gene: 39995612

Centisome position: 14.07

GC content: 60.28

Gene sequence:

>360_bases
ATGACGAGATTCATCGGCGAAAAGATACTCATGCGAATTTTCATCGGCGAGGGAGATCGCTGGGGATCCCGCCCTCTCCA
CGAGGCGCTTCTGGAGCTGCTCAGGCGTGAAGGATGCGCCGGCGCCACGGTGCTGCGGGGGGTGGCAGGCTTCGGGGCAT
CAAGTGTCTGTCATACTGCCAGGCTTCTGGATCTTTCCGCCGACCTTCCCATGGTGGTGGAAGTGGTTGACGATCAGGAG
CGGCTCGATGCTCTGATGCCGAAGATAGACGACATGATGACGGGCGGGATGATCACGTTGGAGAAGGCTACGGTGATCCG
CTATACGCCGGCAGGGAAGGGAGGAGCCGCAACGCCATGA

Upstream 100 bases:

>100_bases
GTTTTTCTCTGCCTCGCTTAACGTCCTTGCCAGCGTGGCCCTCTGCCTCGTCGGTACGTGGGCCGGGATAATGGCGGCGC
GGCAGCTGTAGGGAGGCGTC

Downstream 100 bases:

>100_bases
AGTCAGATCCGAAACGACTTGCCGCTGAAATGGCGATCATTGTCGTCGTGGCCGCCATCATCGGCATAACCTGGAATTAC
CGGCTTCTGGCAGATGTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 118

Protein sequence:

>119_residues
MTRFIGEKILMRIFIGEGDRWGSRPLHEALLELLRREGCAGATVLRGVAGFGASSVCHTARLLDLSADLPMVVEVVDDQE
RLDALMPKIDDMMTGGMITLEKATVIRYTPAGKGGAATP

Sequences:

>Translated_119_residues
MTRFIGEKILMRIFIGEGDRWGSRPLHEALLELLRREGCAGATVLRGVAGFGASSVCHTARLLDLSADLPMVVEVVDDQE
RLDALMPKIDDMMTGGMITLEKATVIRYTPAGKGGAATP
>Mature_118_residues
TRFIGEKILMRIFIGEGDRWGSRPLHEALLELLRREGCAGATVLRGVAGFGASSVCHTARLLDLSADLPMVVEVVDDQER
LDALMPKIDDMMTGGMITLEKATVIRYTPAGKGGAATP

Specific function: Unknown

COG id: COG1993

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0166 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003793
- InterPro:   IPR011322
- InterPro:   IPR015867 [H]

Pfam domain/function: PF02641 DUF190 [H]

EC number: NA

Molecular weight: Translated: 12828; Mature: 12697

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRFIGEKILMRIFIGEGDRWGSRPLHEALLELLRREGCAGATVLRGVAGFGASSVCHTA
CCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHH
RLLDLSADLPMVVEVVDDQERLDALMPKIDDMMTGGMITLEKATVIRYTPAGKGGAATP
HHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCEEEEECCEEEEECCCCCCCCCCC
>Mature Secondary Structure 
TRFIGEKILMRIFIGEGDRWGSRPLHEALLELLRREGCAGATVLRGVAGFGASSVCHTA
CCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHH
RLLDLSADLPMVVEVVDDQERLDALMPKIDDMMTGGMITLEKATVIRYTPAGKGGAATP
HHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCEEEEECCEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12000953 [H]