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The map label for this gene is fliP [H]

Identifier: 39995531

GI number: 39995531

Start: 453450

End: 454217

Strand: Direct

Name: fliP [H]

Synonym: GSU0423

Alternate gene names: 39995531

Gene position: 453450-454217 (Clockwise)

Preceding gene: 39995530

Following gene: 39995532

Centisome position: 11.89

GC content: 61.59

Gene sequence:

>768_bases
ATGGACGGTGTCCCGATATTCAAACGAATCCCTTTCATCGCCCTCTGCGTCATCCTGCTGACCGCCTCGCTGGCGGCCGC
CGCCGAGCCCCTGGCGCTGCCCAGCGTTAGCATCGGGGTGGGCAAGGCCACCAAGCCGGGCGATGTGTCGGTGGTCCTCC
AGATATTCTTCCTGATGACGGTGCTGTCCCTGGCGCCGGGGCTCCTCATGATGACCACCTCGTTCACGCGGATCGCGGTG
GTGCTGTCGTTCCTGCGCCACGCCATCGGCACCCAGCAGGCGCCCCCAAACCAGATCATCATCGCCCTGTCCCTGTTCCT
GACCTTCTTCGTCATGGCTCCGGTCTGGCAGCAGGTGAACACCCAGGCGATCCAGCCTTACCGGGCGGCCCAGATCACCC
AGGATGAGGCCCTGAAACGGGCGGTGGCTCCCATGCGGAAGTTCATGCTTTCCCAGACCCGTGAGAAGGACCTGGCCCTG
TTTCTGAATCTTTCGAAGCTGCCGCGACCCCGTACGGCCGACGACATCCCGACTCTGACCCTCATCCCGGCCTTCATGAT
CAGCGAGCTGCGGACCGCCTTCCAGATCGGGTTTCTGATTTTTATCCCGTTCCTGGTGGTTGATATGGTGGTGGCCTCGG
TCCTCATGTCCATGGGTATGATGATGCTGCCGCCGGTCATGATTTCACTGCCGTTCAAGATCCTCCTCTTTGTCCTGGTG
GACGGGTGGGGGCTGGTCATCGGCTCCCTGATAAAAAGCTTTGGGTAG

Upstream 100 bases:

>100_bases
AGGGAAAACTGGACGCGGTCACGACACGGCTCGCCGCCATGAAGCAGGGGCGTGCCGATGTCCCCGAGCGCCGCGCCGGG
GAAGGAAAAGCCTGAGCACC

Downstream 100 bases:

>100_bases
CGGAGGTTTATCATGAGTCCCGATCTCGTCGTACAGCTTGCCCGCCGCAGCTTCGAGGTGACGCTGATGCTGGCTGCTCC
GCTGCTTATTTCCGGCCTTG

Product: flagellar biosynthesis protein FliP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MDGVPIFKRIPFIALCVILLTASLAAAAEPLALPSVSIGVGKATKPGDVSVVLQIFFLMTVLSLAPGLLMMTTSFTRIAV
VLSFLRHAIGTQQAPPNQIIIALSLFLTFFVMAPVWQQVNTQAIQPYRAAQITQDEALKRAVAPMRKFMLSQTREKDLAL
FLNLSKLPRPRTADDIPTLTLIPAFMISELRTAFQIGFLIFIPFLVVDMVVASVLMSMGMMMLPPVMISLPFKILLFVLV
DGWGLVIGSLIKSFG

Sequences:

>Translated_255_residues
MDGVPIFKRIPFIALCVILLTASLAAAAEPLALPSVSIGVGKATKPGDVSVVLQIFFLMTVLSLAPGLLMMTTSFTRIAV
VLSFLRHAIGTQQAPPNQIIIALSLFLTFFVMAPVWQQVNTQAIQPYRAAQITQDEALKRAVAPMRKFMLSQTREKDLAL
FLNLSKLPRPRTADDIPTLTLIPAFMISELRTAFQIGFLIFIPFLVVDMVVASVLMSMGMMMLPPVMISLPFKILLFVLV
DGWGLVIGSLIKSFG
>Mature_255_residues
MDGVPIFKRIPFIALCVILLTASLAAAAEPLALPSVSIGVGKATKPGDVSVVLQIFFLMTVLSLAPGLLMMTTSFTRIAV
VLSFLRHAIGTQQAPPNQIIIALSLFLTFFVMAPVWQQVNTQAIQPYRAAQITQDEALKRAVAPMRKFMLSQTREKDLAL
FLNLSKLPRPRTADDIPTLTLIPAFMISELRTAFQIGFLIFIPFLVVDMVVASVLMSMGMMMLPPVMISLPFKILLFVLV
DGWGLVIGSLIKSFG

Specific function: Plays a role in the flagellum-specific transport system [H]

COG id: COG1338

COG function: function code NU; Flagellar biosynthesis pathway, component FliP

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliP/mopC/spaP family [H]

Homologues:

Organism=Escherichia coli, GI1788259, Length=219, Percent_Identity=50.2283105022831, Blast_Score=222, Evalue=1e-59,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005837
- InterPro:   IPR005838 [H]

Pfam domain/function: PF00813 FliP [H]

EC number: NA

Molecular weight: Translated: 27877; Mature: 27877

Theoretical pI: Translated: 10.71; Mature: 10.71

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01060 FLIP_1 ; PS01061 FLIP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHCC
>Mature Secondary Structure
MDGVPIFKRIPFIALCVILLTASLAAAAEPLALPSVSIGVGKATKPGDVSVVLQIFFLMT
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
VLSLAPGLLMMTTSFTRIAVVLSFLRHAIGTQQAPPNQIIIALSLFLTFFVMAPVWQQVN
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
TQAIQPYRAAQITQDEALKRAVAPMRKFMLSQTREKDLALFLNLSKLPRPRTADDIPTLT
HHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
LIPAFMISELRTAFQIGFLIFIPFLVVDMVVASVLMSMGMMMLPPVMISLPFKILLFVLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DGWGLVIGSLIKSFG
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1597417; 9384377 [H]