| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is pspE [C]
Identifier: 39995506
GI number: 39995506
Start: 429887
End: 430243
Strand: Direct
Name: pspE [C]
Synonym: GSU0398
Alternate gene names: 39995506
Gene position: 429887-430243 (Clockwise)
Preceding gene: 39995505
Following gene: 39995507
Centisome position: 11.27
GC content: 64.71
Gene sequence:
>357_bases GTGTTCATGGTGACGTCGCTCGCCGCCACCGCCCTGGCTGCGCCCTACCGCAACATCGGTTCGGCCGAGGCCAAGGCGCT GCTTGACAAGAAACGCAACGTCTTTCTCCTGGACGTGCGGACCCCTGACGAATACCGCCAGGCCCGCTTGGCCGGGTCGG TGCTTATTCCAATCAACGAAGTGGAGCGCCGCATCGCACAGATCCCCAAGGGGAGGCCGGTGCTGGTATATTGCGCCGTG GGCTCCCGCTCGGGGCTCGTGGCCGGCTACCTGACCCAGCGGGGATACGGCGAAGTCTACAACATGCACGACGGCATCGT CGGCTGGTATCGCAACGGGTTTCCGATCACCCGGTGA
Upstream 100 bases:
>100_bases ATGAATTCCCCGGCCGGTTTCACCCGTCCGCGGTGGGATACACCCTGGAAGTCTGAACGCAAGGAAAGGATCTTTCATGA TCAGGAAGTTTATCATTGCC
Downstream 100 bases:
>100_bases CAACATTCGTGAGGTGATGACCATGAGTGAAGAGCTAACACGAGACTACGAGATATCGGCCCAGCTGCTGCGCATCCTCG GCCATCCGGTGCGGCTGCGG
Product: phage prohead protease
Products: NA
Alternate protein names: Rhodanese Domain Protein; Rhodanese-Like Protein; Rhodanese-Like Domain-Containing Protein; Rhodanese-Related Sulfurtransferase; Rhodanese-Like Domain Protein; Phage Shock Protein E; Pyridine Nucleotide-Disulphide Oxidoreductase; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Metallo-Beta-Lactamase; Rhodanese Family Protein; Pyridine Nucleotide-Disulfide Oxidoreductase Family Protein; Beta-Lactamase Domain-Containing Protein; Molybdopterin Biosynthesis Protein; SirA Family Protein; Molybdopterin Biosynthesis Protein MoeB; Phage Prohead Protease; Rhodanese Homology Domain Superfamily Protein; FAD-Dependent Pyridine Nucleotide-Disulphide Oxidoreductase; Pyridine Nucleotide Oxidoreductase; Sulfurtransferase; Beta-Lactamase Domain Protein; Beta-Lactamase-Like Protein; Metallo-Beta-Lactamase Family Protein; Molybdenum Cofactor Biosynthesis Protein; NADH Oxidase/Rhodanese-Related Sulfurtransferase; Methyl-Accepting Chemotaxis Sensory Transducer; Thioredoxin; Pyridine Nucleotide-Disulfide Oxidoreductase
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MFMVTSLAATALAAPYRNIGSAEAKALLDKKRNVFLLDVRTPDEYRQARLAGSVLIPINEVERRIAQIPKGRPVLVYCAV GSRSGLVAGYLTQRGYGEVYNMHDGIVGWYRNGFPITR
Sequences:
>Translated_118_residues MFMVTSLAATALAAPYRNIGSAEAKALLDKKRNVFLLDVRTPDEYRQARLAGSVLIPINEVERRIAQIPKGRPVLVYCAV GSRSGLVAGYLTQRGYGEVYNMHDGIVGWYRNGFPITR >Mature_118_residues MFMVTSLAATALAAPYRNIGSAEAKALLDKKRNVFLLDVRTPDEYRQARLAGSVLIPINEVERRIAQIPKGRPVLVYCAV GSRSGLVAGYLTQRGYGEVYNMHDGIVGWYRNGFPITR
Specific function: Unknown
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13072; Mature: 13072
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFMVTSLAATALAAPYRNIGSAEAKALLDKKRNVFLLDVRTPDEYRQARLAGSVLIPINE CEEEHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCEEEEEHHH VERRIAQIPKGRPVLVYCAVGSRSGLVAGYLTQRGYGEVYNMHDGIVGWYRNGFPITR HHHHHHHCCCCCEEEEEEECCCCCCEEEEEECCCCCCCEEECCCCEEEEECCCCCCCC >Mature Secondary Structure MFMVTSLAATALAAPYRNIGSAEAKALLDKKRNVFLLDVRTPDEYRQARLAGSVLIPINE CEEEHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCEEEEEHHH VERRIAQIPKGRPVLVYCAVGSRSGLVAGYLTQRGYGEVYNMHDGIVGWYRNGFPITR HHHHHHHCCCCCEEEEEEECCCCCCEEEEEECCCCCCCEEECCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA