BacMap

Definition	Geobacter sulfurreducens PCA chromosome, complete genome.
Accession	NC_002939
Length	3,814,139

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The map label for this gene is dbpA [H]

Identifier: 39995299

GI number: 39995299

Start: 201957

End: 203339

Strand: Direct

Name: dbpA [H]

Synonym: GSU0189

Alternate gene names: 39995299

Gene position: 201957-203339 (Clockwise)

Preceding gene: 39995295

Following gene: 39995302

Centisome position: 5.29

GC content: 63.92

Gene sequence:

>1383_bases
ATGAATCCGAAAGCATTTTCGTCGCTTCGCCTGAAAGCCCCCATGCTCAGGAACCTGGCCTCCCTCGGCTATGCCGAGAT
GACACCGATTCAGGCCCACAGCCTGCCGCTCATCCTGGCCGGCAAGGATGTGATCGCCAGGGCCAAGACCGGTAGCGGCA
AGACCGCGGCTTTTGGCATCGGACTGCTGTCGCGTCTGGATGCATTATCCTTCCGGGTGCAGGCGTTGGTGCTCTGCCCG
ACCCGTGAGCTGGCCGATCAGGTGGGCAAGGAACTGCGGCGTCTGGCTCGATTCACCGACAACATCAAGATCTTGACCAT
CTGTGGCGGTGTTCCCTTCGGGCCCCAGCTGGGTTCGCTGGAGCATGGGGCCCATGTGGTGATAGGCACACCCGGCCGCC
TGCTGGATCACTTGCGGCGCGGCAGCCTTGACCTCTCCGCGCTGCGGACCCTGGTATTGGACGAGGCGGACCGGATGCTC
GACATGGGGTTCCAGGATGACATCAGTGCCCTGATCGCCGCCGCCCCGCCCAAGAGGCAGACTCTCCTCTTTTCCGCCAC
CTACCCGGACTCCATTGCCGCCATGAGCGCCGGGGTCCAGAGGGAGCCGGTGGAGGTCAGCGTGGACGAGGTCCATGGGG
AGGGGGCCATCGAGCAGGTATTCTACGAGGTGGACAGCGGCCAGCGGATCGAAGCGGTCGAGCGGATTCTCGGGCACTAT
CGTCCCGAGTCTGCTCTCATCTTCTGCAACACGAAGCTGGAGTGCCAGGAGGTGGCCAATGCCCTGGCCGTCCGGGGGTA
TGCCGCACTGGCCATCCATGGTGACCTGGACCAGCGGGAGCGGGACCGGGTGCTGGTCCGGTTTGCCAACAGGAGCGCAT
CGGTGCTGGTAGCAACCGACGTTGCCGCCCGGGGGCTGGACATCAAGGAGCTTTCGGCGGTGATTAACTACGAGTTGACC
CGCAATCCGGAGGTCCATACCCACCGCATCGGCCGCACCGGTCGCGCCGGGGAGCGGGGGCTGGCCGTAAGCTTGGTAAC
GCCCCGGGAAAGCCGTCTGATTGCAGCCATCGCGGATGTGCCCGGCAGCATTATCGCCCGTGGCGACCTGTCCACGCTGG
CACCGCTAACGGCGAAGCCGCCGCTGCCCCCCATGGTGACGCTCTGCATCGACGGGGGCCGCAAAAACAAGCTGCGGCCC
GGTGATATTCTGGGGGCACTCACCGGAGAGGGAGGTATGCCGGCCAGCGAGGTGGGGAAGATTGATGTGTTCGATTTCTT
TACCTACGTGGCCATTGCGCGGCAGAGCAGTGAGCAGGCCTTGAACTTTCTGAGGGGACACAGGATCAAGGGGCGTTTCT
TCAAGGTGAGGAAAGCAGTCTGA

Upstream 100 bases:

>100_bases
TGGATTGATCCCTTGGTCGCAGCGTGGTATATCTGGCAAGCGTCTGAACCACAGGGCCGGCCCTGTGGTTTTTTTGTGGG
CGCAGAACGGGAGTGTCCCC

Downstream 100 bases:

>100_bases
CGATATGGGTTTTCTGGAAGAGAAGCGGGGCATGCGTGGCAATCTGCTGACCATGCCGTTCTCCCGAGACTCCGCTGAAG
CCTTGCGGTGTTAAGGTGAA

Product: ATP-dependent RNA helicase DbpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 460; Mature: 460

Protein sequence:

>460_residues
MNPKAFSSLRLKAPMLRNLASLGYAEMTPIQAHSLPLILAGKDVIARAKTGSGKTAAFGIGLLSRLDALSFRVQALVLCP
TRELADQVGKELRRLARFTDNIKILTICGGVPFGPQLGSLEHGAHVVIGTPGRLLDHLRRGSLDLSALRTLVLDEADRML
DMGFQDDISALIAAAPPKRQTLLFSATYPDSIAAMSAGVQREPVEVSVDEVHGEGAIEQVFYEVDSGQRIEAVERILGHY
RPESALIFCNTKLECQEVANALAVRGYAALAIHGDLDQRERDRVLVRFANRSASVLVATDVAARGLDIKELSAVINYELT
RNPEVHTHRIGRTGRAGERGLAVSLVTPRESRLIAAIADVPGSIIARGDLSTLAPLTAKPPLPPMVTLCIDGGRKNKLRP
GDILGALTGEGGMPASEVGKIDVFDFFTYVAIARQSSEQALNFLRGHRIKGRFFKVRKAV

Sequences:

>Translated_460_residues
MNPKAFSSLRLKAPMLRNLASLGYAEMTPIQAHSLPLILAGKDVIARAKTGSGKTAAFGIGLLSRLDALSFRVQALVLCP
TRELADQVGKELRRLARFTDNIKILTICGGVPFGPQLGSLEHGAHVVIGTPGRLLDHLRRGSLDLSALRTLVLDEADRML
DMGFQDDISALIAAAPPKRQTLLFSATYPDSIAAMSAGVQREPVEVSVDEVHGEGAIEQVFYEVDSGQRIEAVERILGHY
RPESALIFCNTKLECQEVANALAVRGYAALAIHGDLDQRERDRVLVRFANRSASVLVATDVAARGLDIKELSAVINYELT
RNPEVHTHRIGRTGRAGERGLAVSLVTPRESRLIAAIADVPGSIIARGDLSTLAPLTAKPPLPPMVTLCIDGGRKNKLRP
GDILGALTGEGGMPASEVGKIDVFDFFTYVAIARQSSEQALNFLRGHRIKGRFFKVRKAV
>Mature_460_residues
MNPKAFSSLRLKAPMLRNLASLGYAEMTPIQAHSLPLILAGKDVIARAKTGSGKTAAFGIGLLSRLDALSFRVQALVLCP
TRELADQVGKELRRLARFTDNIKILTICGGVPFGPQLGSLEHGAHVVIGTPGRLLDHLRRGSLDLSALRTLVLDEADRML
DMGFQDDISALIAAAPPKRQTLLFSATYPDSIAAMSAGVQREPVEVSVDEVHGEGAIEQVFYEVDSGQRIEAVERILGHY
RPESALIFCNTKLECQEVANALAVRGYAALAIHGDLDQRERDRVLVRFANRSASVLVATDVAARGLDIKELSAVINYELT
RNPEVHTHRIGRTGRAGERGLAVSLVTPRESRLIAAIADVPGSIIARGDLSTLAPLTAKPPLPPMVTLCIDGGRKNKLRP
GDILGALTGEGGMPASEVGKIDVFDFFTYVAIARQSSEQALNFLRGHRIKGRFFKVRKAV

Specific function: Has a helix-destabilizing activity, which is not coupled to the ATPase activity. Can unwind the 23S rRNA as well as 16S rRNA. Exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA. Could play a major role in ribosome ass

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI45446747, Length=358, Percent_Identity=38.5474860335196, Blast_Score=249, Evalue=3e-66,
Organism=Homo sapiens, GI45446743, Length=358, Percent_Identity=38.5474860335196, Blast_Score=249, Evalue=3e-66,
Organism=Homo sapiens, GI7661920, Length=356, Percent_Identity=37.3595505617978, Blast_Score=248, Evalue=1e-65,
Organism=Homo sapiens, GI164664518, Length=360, Percent_Identity=33.6111111111111, Blast_Score=234, Evalue=2e-61,
Organism=Homo sapiens, GI148613856, Length=355, Percent_Identity=36.9014084507042, Blast_Score=229, Evalue=4e-60,
Organism=Homo sapiens, GI38201710, Length=355, Percent_Identity=36.9014084507042, Blast_Score=229, Evalue=4e-60,
Organism=Homo sapiens, GI4758138, Length=369, Percent_Identity=35.7723577235772, Blast_Score=229, Evalue=5e-60,
Organism=Homo sapiens, GI87196351, Length=381, Percent_Identity=36.4829396325459, Blast_Score=226, Evalue=3e-59,
Organism=Homo sapiens, GI301171475, Length=381, Percent_Identity=36.4829396325459, Blast_Score=226, Evalue=3e-59,
Organism=Homo sapiens, GI301171467, Length=381, Percent_Identity=36.4829396325459, Blast_Score=225, Evalue=5e-59,
Organism=Homo sapiens, GI262118318, Length=384, Percent_Identity=36.1979166666667, Blast_Score=225, Evalue=7e-59,
Organism=Homo sapiens, GI31542656, Length=363, Percent_Identity=36.9146005509642, Blast_Score=224, Evalue=2e-58,
Organism=Homo sapiens, GI262231852, Length=381, Percent_Identity=36.4829396325459, Blast_Score=224, Evalue=2e-58,
Organism=Homo sapiens, GI216548263, Length=381, Percent_Identity=36.4829396325459, Blast_Score=224, Evalue=2e-58,
Organism=Homo sapiens, GI169881239, Length=382, Percent_Identity=37.17277486911, Blast_Score=224, Evalue=2e-58,
Organism=Homo sapiens, GI13514809, Length=382, Percent_Identity=37.17277486911, Blast_Score=224, Evalue=2e-58,
Organism=Homo sapiens, GI13518015, Length=381, Percent_Identity=36.4829396325459, Blast_Score=223, Evalue=2e-58,
Organism=Homo sapiens, GI41327773, Length=391, Percent_Identity=35.0383631713555, Blast_Score=222, Evalue=5e-58,
Organism=Homo sapiens, GI50659095, Length=381, Percent_Identity=35.9580052493438, Blast_Score=222, Evalue=5e-58,
Organism=Homo sapiens, GI21071032, Length=359, Percent_Identity=36.7688022284123, Blast_Score=219, Evalue=6e-57,
Organism=Homo sapiens, GI20149629, Length=361, Percent_Identity=34.9030470914127, Blast_Score=216, Evalue=3e-56,
Organism=Homo sapiens, GI224593278, Length=363, Percent_Identity=37.465564738292, Blast_Score=214, Evalue=1e-55,
Organism=Homo sapiens, GI13129006, Length=364, Percent_Identity=36.5384615384615, Blast_Score=210, Evalue=2e-54,
Organism=Homo sapiens, GI41327771, Length=405, Percent_Identity=35.3086419753086, Blast_Score=205, Evalue=8e-53,
Organism=Homo sapiens, GI188035877, Length=358, Percent_Identity=34.0782122905028, Blast_Score=204, Evalue=1e-52,
Organism=Homo sapiens, GI83700235, Length=356, Percent_Identity=35.3932584269663, Blast_Score=203, Evalue=3e-52,
Organism=Homo sapiens, GI4758112, Length=380, Percent_Identity=28.9473684210526, Blast_Score=202, Evalue=6e-52,
Organism=Homo sapiens, GI18375623, Length=380, Percent_Identity=28.9473684210526, Blast_Score=202, Evalue=6e-52,
Organism=Homo sapiens, GI21040371, Length=388, Percent_Identity=29.3814432989691, Blast_Score=202, Evalue=8e-52,
Organism=Homo sapiens, GI4503529, Length=357, Percent_Identity=34.453781512605, Blast_Score=197, Evalue=1e-50,
Organism=Homo sapiens, GI51094101, Length=350, Percent_Identity=36.5714285714286, Blast_Score=197, Evalue=2e-50,
Organism=Homo sapiens, GI164419743, Length=350, Percent_Identity=36.5714285714286, Blast_Score=197, Evalue=2e-50,
Organism=Homo sapiens, GI55749865, Length=348, Percent_Identity=30.7471264367816, Blast_Score=196, Evalue=3e-50,
Organism=Homo sapiens, GI222352149, Length=355, Percent_Identity=31.5492957746479, Blast_Score=195, Evalue=9e-50,
Organism=Homo sapiens, GI8922886, Length=364, Percent_Identity=34.6153846153846, Blast_Score=192, Evalue=7e-49,
Organism=Homo sapiens, GI6005743, Length=364, Percent_Identity=34.6153846153846, Blast_Score=192, Evalue=8e-49,
Organism=Homo sapiens, GI41327779, Length=362, Percent_Identity=35.6353591160221, Blast_Score=191, Evalue=2e-48,
Organism=Homo sapiens, GI38327634, Length=346, Percent_Identity=34.1040462427746, Blast_Score=186, Evalue=4e-47,
Organism=Homo sapiens, GI13514831, Length=365, Percent_Identity=34.7945205479452, Blast_Score=184, Evalue=1e-46,
Organism=Homo sapiens, GI41327776, Length=361, Percent_Identity=31.5789473684211, Blast_Score=183, Evalue=2e-46,
Organism=Homo sapiens, GI164419732, Length=378, Percent_Identity=32.5396825396825, Blast_Score=181, Evalue=1e-45,
Organism=Homo sapiens, GI62241022, Length=346, Percent_Identity=34.393063583815, Blast_Score=179, Evalue=7e-45,
Organism=Homo sapiens, GI256223453, Length=352, Percent_Identity=29.2613636363636, Blast_Score=177, Evalue=2e-44,
Organism=Homo sapiens, GI17505907, Length=414, Percent_Identity=30.9178743961353, Blast_Score=171, Evalue=1e-42,
Organism=Homo sapiens, GI62241024, Length=324, Percent_Identity=34.2592592592593, Blast_Score=166, Evalue=4e-41,
Organism=Homo sapiens, GI38569503, Length=373, Percent_Identity=29.7587131367292, Blast_Score=162, Evalue=4e-40,
Organism=Homo sapiens, GI38569505, Length=373, Percent_Identity=29.7587131367292, Blast_Score=162, Evalue=6e-40,
Organism=Homo sapiens, GI9506931, Length=395, Percent_Identity=28.8607594936709, Blast_Score=161, Evalue=1e-39,
Organism=Homo sapiens, GI4826686, Length=348, Percent_Identity=30.4597701149425, Blast_Score=149, Evalue=4e-36,
Organism=Homo sapiens, GI9966805, Length=312, Percent_Identity=33.974358974359, Blast_Score=140, Evalue=3e-33,
Organism=Homo sapiens, GI20336298, Length=222, Percent_Identity=36.036036036036, Blast_Score=127, Evalue=3e-29,
Organism=Homo sapiens, GI256773275, Length=393, Percent_Identity=28.7531806615776, Blast_Score=113, Evalue=4e-25,
Organism=Homo sapiens, GI154759257, Length=449, Percent_Identity=26.5033407572383, Blast_Score=106, Evalue=4e-23,
Organism=Escherichia coli, GI1787605, Length=457, Percent_Identity=55.5798687089716, Blast_Score=499, Evalue=1e-142,
Organism=Escherichia coli, GI87082221, Length=353, Percent_Identity=45.042492917847, Blast_Score=286, Evalue=1e-78,
Organism=Escherichia coli, GI1787016, Length=360, Percent_Identity=43.3333333333333, Blast_Score=266, Evalue=2e-72,
Organism=Escherichia coli, GI1790214, Length=391, Percent_Identity=36.8286445012788, Blast_Score=222, Evalue=3e-59,
Organism=Escherichia coli, GI1788930, Length=374, Percent_Identity=37.1657754010695, Blast_Score=199, Evalue=3e-52,
Organism=Caenorhabditis elegans, GI71987143, Length=357, Percent_Identity=37.5350140056022, Blast_Score=254, Evalue=1e-67,
Organism=Caenorhabditis elegans, GI71995724, Length=356, Percent_Identity=37.3595505617978, Blast_Score=252, Evalue=3e-67,
Organism=Caenorhabditis elegans, GI17507121, Length=356, Percent_Identity=37.3595505617978, Blast_Score=251, Evalue=5e-67,
Organism=Caenorhabditis elegans, GI115533224, Length=349, Percent_Identity=38.9684813753582, Blast_Score=229, Evalue=2e-60,
Organism=Caenorhabditis elegans, GI17507877, Length=389, Percent_Identity=37.2750642673522, Blast_Score=225, Evalue=3e-59,
Organism=Caenorhabditis elegans, GI17507879, Length=372, Percent_Identity=37.6344086021505, Blast_Score=220, Evalue=1e-57,
Organism=Caenorhabditis elegans, GI17552114, Length=342, Percent_Identity=32.7485380116959, Blast_Score=218, Evalue=5e-57,
Organism=Caenorhabditis elegans, GI17552642, Length=362, Percent_Identity=35.9116022099448, Blast_Score=217, Evalue=9e-57,
Organism=Caenorhabditis elegans, GI17555296, Length=346, Percent_Identity=36.7052023121387, Blast_Score=216, Evalue=2e-56,
Organism=Caenorhabditis elegans, GI86570094, Length=369, Percent_Identity=36.8563685636856, Blast_Score=215, Evalue=4e-56,
Organism=Caenorhabditis elegans, GI17510307, Length=367, Percent_Identity=36.2397820163488, Blast_Score=214, Evalue=6e-56,
Organism=Caenorhabditis elegans, GI71995514, Length=367, Percent_Identity=36.2397820163488, Blast_Score=214, Evalue=6e-56,
Organism=Caenorhabditis elegans, GI17510309, Length=367, Percent_Identity=36.2397820163488, Blast_Score=214, Evalue=7e-56,
Organism=Caenorhabditis elegans, GI71995718, Length=378, Percent_Identity=35.7142857142857, Blast_Score=209, Evalue=3e-54,
Organism=Caenorhabditis elegans, GI17507881, Length=372, Percent_Identity=34.9462365591398, Blast_Score=207, Evalue=1e-53,
Organism=Caenorhabditis elegans, GI32565321, Length=399, Percent_Identity=33.5839598997494, Blast_Score=204, Evalue=8e-53,
Organism=Caenorhabditis elegans, GI17510559, Length=389, Percent_Identity=34.1902313624679, Blast_Score=204, Evalue=1e-52,
Organism=Caenorhabditis elegans, GI71982858, Length=388, Percent_Identity=29.1237113402062, Blast_Score=201, Evalue=8e-52,
Organism=Caenorhabditis elegans, GI115532546, Length=375, Percent_Identity=32.8, Blast_Score=197, Evalue=7e-51,
Organism=Caenorhabditis elegans, GI115532548, Length=375, Percent_Identity=32.8, Blast_Score=196, Evalue=3e-50,
Organism=Caenorhabditis elegans, GI17507945, Length=339, Percent_Identity=36.283185840708, Blast_Score=192, Evalue=3e-49,
Organism=Caenorhabditis elegans, GI71999646, Length=352, Percent_Identity=34.375, Blast_Score=192, Evalue=4e-49,
Organism=Caenorhabditis elegans, GI71999644, Length=350, Percent_Identity=34, Blast_Score=190, Evalue=2e-48,
Organism=Caenorhabditis elegans, GI17536099, Length=401, Percent_Identity=32.4189526184539, Blast_Score=187, Evalue=8e-48,
Organism=Caenorhabditis elegans, GI17536101, Length=403, Percent_Identity=32.7543424317618, Blast_Score=187, Evalue=1e-47,
Organism=Caenorhabditis elegans, GI17505370, Length=361, Percent_Identity=32.9639889196676, Blast_Score=183, Evalue=2e-46,
Organism=Caenorhabditis elegans, GI17536103, Length=403, Percent_Identity=32.7543424317618, Blast_Score=182, Evalue=3e-46,
Organism=Caenorhabditis elegans, GI17537549, Length=362, Percent_Identity=32.0441988950276, Blast_Score=181, Evalue=6e-46,
Organism=Caenorhabditis elegans, GI193206561, Length=399, Percent_Identity=27.8195488721804, Blast_Score=179, Evalue=2e-45,
Organism=Caenorhabditis elegans, GI17553716, Length=372, Percent_Identity=30.1075268817204, Blast_Score=172, Evalue=4e-43,
Organism=Caenorhabditis elegans, GI17509811, Length=361, Percent_Identity=31.5789473684211, Blast_Score=169, Evalue=3e-42,
Organism=Caenorhabditis elegans, GI193208216, Length=383, Percent_Identity=29.7650130548303, Blast_Score=148, Evalue=5e-36,
Organism=Caenorhabditis elegans, GI17508543, Length=377, Percent_Identity=29.4429708222812, Blast_Score=143, Evalue=2e-34,
Organism=Caenorhabditis elegans, GI71990816, Length=363, Percent_Identity=30.8539944903581, Blast_Score=135, Evalue=4e-32,
Organism=Caenorhabditis elegans, GI17507641, Length=385, Percent_Identity=30.1298701298701, Blast_Score=134, Evalue=7e-32,
Organism=Caenorhabditis elegans, GI25148203, Length=406, Percent_Identity=24.1379310344828, Blast_Score=132, Evalue=5e-31,
Organism=Caenorhabditis elegans, GI32564046, Length=374, Percent_Identity=30.7486631016043, Blast_Score=131, Evalue=8e-31,
Organism=Caenorhabditis elegans, GI71982862, Length=194, Percent_Identity=32.9896907216495, Blast_Score=127, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI17556951, Length=364, Percent_Identity=26.3736263736264, Blast_Score=126, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI25148291, Length=332, Percent_Identity=28.3132530120482, Blast_Score=111, Evalue=7e-25,
Organism=Caenorhabditis elegans, GI71997889, Length=383, Percent_Identity=26.8929503916449, Blast_Score=103, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI25148205, Length=329, Percent_Identity=22.1884498480243, Blast_Score=96, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI71987152, Length=86, Percent_Identity=46.5116279069767, Blast_Score=93, Evalue=3e-19,
Organism=Saccharomyces cerevisiae, GI6324217, Length=356, Percent_Identity=38.4831460674157, Blast_Score=243, Evalue=5e-65,
Organism=Saccharomyces cerevisiae, GI6321360, Length=369, Percent_Identity=40.3794037940379, Blast_Score=243, Evalue=5e-65,
Organism=Saccharomyces cerevisiae, GI6320224, Length=350, Percent_Identity=37.7142857142857, Blast_Score=243, Evalue=6e-65,
Organism=Saccharomyces cerevisiae, GI6325138, Length=376, Percent_Identity=36.7021276595745, Blast_Score=228, Evalue=2e-60,
Organism=Saccharomyces cerevisiae, GI6320041, Length=386, Percent_Identity=31.8652849740933, Blast_Score=226, Evalue=6e-60,
Organism=Saccharomyces cerevisiae, GI6324778, Length=380, Percent_Identity=36.0526315789474, Blast_Score=225, Evalue=1e-59,
Organism=Saccharomyces cerevisiae, GI6323021, Length=351, Percent_Identity=36.7521367521368, Blast_Score=218, Evalue=2e-57,
Organism=Saccharomyces cerevisiae, GI6321856, Length=362, Percent_Identity=36.1878453038674, Blast_Score=211, Evalue=2e-55,
Organism=Saccharomyces cerevisiae, GI6322912, Length=348, Percent_Identity=36.7816091954023, Blast_Score=210, Evalue=3e-55,
Organism=Saccharomyces cerevisiae, GI6322323, Length=348, Percent_Identity=36.7816091954023, Blast_Score=210, Evalue=3e-55,
Organism=Saccharomyces cerevisiae, GI6320119, Length=365, Percent_Identity=29.5890410958904, Blast_Score=202, Evalue=1e-52,
Organism=Saccharomyces cerevisiae, GI6324620, Length=374, Percent_Identity=32.3529411764706, Blast_Score=195, Evalue=2e-50,
Organism=Saccharomyces cerevisiae, GI6321963, Length=370, Percent_Identity=36.7567567567568, Blast_Score=194, Evalue=3e-50,
Organism=Saccharomyces cerevisiae, GI6320449, Length=358, Percent_Identity=33.7988826815642, Blast_Score=192, Evalue=1e-49,
Organism=Saccharomyces cerevisiae, GI6323947, Length=359, Percent_Identity=33.1476323119777, Blast_Score=189, Evalue=7e-49,
Organism=Saccharomyces cerevisiae, GI6322427, Length=364, Percent_Identity=32.6923076923077, Blast_Score=176, Evalue=7e-45,
Organism=Saccharomyces cerevisiae, GI6319618, Length=411, Percent_Identity=31.3868613138686, Blast_Score=171, Evalue=3e-43,
Organism=Saccharomyces cerevisiae, GI6319714, Length=416, Percent_Identity=30.7692307692308, Blast_Score=170, Evalue=5e-43,
Organism=Saccharomyces cerevisiae, GI6321111, Length=379, Percent_Identity=30.3430079155673, Blast_Score=162, Evalue=1e-40,
Organism=Saccharomyces cerevisiae, GI6321267, Length=365, Percent_Identity=32.8767123287671, Blast_Score=151, Evalue=2e-37,
Organism=Saccharomyces cerevisiae, GI6320400, Length=392, Percent_Identity=29.3367346938776, Blast_Score=148, Evalue=1e-36,
Organism=Saccharomyces cerevisiae, GI6320173, Length=229, Percent_Identity=37.5545851528384, Blast_Score=145, Evalue=1e-35,
Organism=Saccharomyces cerevisiae, GI6323306, Length=419, Percent_Identity=26.491646778043, Blast_Score=136, Evalue=7e-33,
Organism=Saccharomyces cerevisiae, GI6322876, Length=430, Percent_Identity=27.4418604651163, Blast_Score=114, Evalue=4e-26,
Organism=Saccharomyces cerevisiae, GI6324366, Length=410, Percent_Identity=25.8536585365854, Blast_Score=108, Evalue=2e-24,
Organism=Drosophila melanogaster, GI24645031, Length=356, Percent_Identity=37.0786516853933, Blast_Score=247, Evalue=1e-65,
Organism=Drosophila melanogaster, GI24584399, Length=361, Percent_Identity=40.4432132963989, Blast_Score=243, Evalue=2e-64,
Organism=Drosophila melanogaster, GI24662330, Length=357, Percent_Identity=36.4145658263305, Blast_Score=237, Evalue=1e-62,
Organism=Drosophila melanogaster, GI28574962, Length=347, Percent_Identity=38.328530259366, Blast_Score=228, Evalue=8e-60,
Organism=Drosophila melanogaster, GI24583281, Length=342, Percent_Identity=34.5029239766082, Blast_Score=224, Evalue=1e-58,
Organism=Drosophila melanogaster, GI24583279, Length=342, Percent_Identity=34.5029239766082, Blast_Score=223, Evalue=1e-58,
Organism=Drosophila melanogaster, GI24642151, Length=387, Percent_Identity=35.6589147286822, Blast_Score=221, Evalue=6e-58,
Organism=Drosophila melanogaster, GI18857967, Length=367, Percent_Identity=34.3324250681199, Blast_Score=219, Evalue=4e-57,
Organism=Drosophila melanogaster, GI24644487, Length=372, Percent_Identity=34.9462365591398, Blast_Score=216, Evalue=2e-56,
Organism=Drosophila melanogaster, GI45551833, Length=372, Percent_Identity=34.9462365591398, Blast_Score=216, Evalue=2e-56,
Organism=Drosophila melanogaster, GI24644485, Length=372, Percent_Identity=34.9462365591398, Blast_Score=216, Evalue=2e-56,
Organism=Drosophila melanogaster, GI281361218, Length=372, Percent_Identity=34.9462365591398, Blast_Score=216, Evalue=2e-56,
Organism=Drosophila melanogaster, GI24644481, Length=372, Percent_Identity=34.9462365591398, Blast_Score=216, Evalue=2e-56,
Organism=Drosophila melanogaster, GI24644483, Length=372, Percent_Identity=34.9462365591398, Blast_Score=216, Evalue=3e-56,
Organism=Drosophila melanogaster, GI24644479, Length=372, Percent_Identity=34.9462365591398, Blast_Score=216, Evalue=4e-56,
Organism=Drosophila melanogaster, GI21355075, Length=354, Percent_Identity=34.7457627118644, Blast_Score=215, Evalue=5e-56,
Organism=Drosophila melanogaster, GI24582080, Length=355, Percent_Identity=34.9295774647887, Blast_Score=212, Evalue=5e-55,
Organism=Drosophila melanogaster, GI24582078, Length=355, Percent_Identity=34.9295774647887, Blast_Score=212, Evalue=5e-55,
Organism=Drosophila melanogaster, GI17136248, Length=355, Percent_Identity=34.9295774647887, Blast_Score=212, Evalue=5e-55,
Organism=Drosophila melanogaster, GI24582075, Length=355, Percent_Identity=34.9295774647887, Blast_Score=212, Evalue=5e-55,
Organism=Drosophila melanogaster, GI17985987, Length=386, Percent_Identity=35.2331606217617, Blast_Score=211, Evalue=6e-55,
Organism=Drosophila melanogaster, GI17977678, Length=359, Percent_Identity=35.3760445682451, Blast_Score=209, Evalue=2e-54,
Organism=Drosophila melanogaster, GI21356161, Length=392, Percent_Identity=34.9489795918367, Blast_Score=209, Evalue=4e-54,
Organism=Drosophila melanogaster, GI24585582, Length=362, Percent_Identity=35.0828729281768, Blast_Score=207, Evalue=1e-53,
Organism=Drosophila melanogaster, GI24584994, Length=371, Percent_Identity=35.3099730458221, Blast_Score=206, Evalue=2e-53,
Organism=Drosophila melanogaster, GI17136814, Length=366, Percent_Identity=37.431693989071, Blast_Score=206, Evalue=2e-53,
Organism=Drosophila melanogaster, GI28575014, Length=347, Percent_Identity=34.5821325648415, Blast_Score=195, Evalue=5e-50,
Organism=Drosophila melanogaster, GI24581954, Length=389, Percent_Identity=29.0488431876607, Blast_Score=189, Evalue=4e-48,
Organism=Drosophila melanogaster, GI24581952, Length=389, Percent_Identity=29.0488431876607, Blast_Score=189, Evalue=4e-48,
Organism=Drosophila melanogaster, GI24581956, Length=389, Percent_Identity=29.0488431876607, Blast_Score=189, Evalue=4e-48,
Organism=Drosophila melanogaster, GI281365720, Length=306, Percent_Identity=37.2549019607843, Blast_Score=187, Evalue=9e-48,
Organism=Drosophila melanogaster, GI28571808, Length=362, Percent_Identity=32.8729281767956, Blast_Score=184, Evalue=8e-47,
Organism=Drosophila melanogaster, GI28571809, Length=362, Percent_Identity=32.8729281767956, Blast_Score=184, Evalue=8e-47,
Organism=Drosophila melanogaster, GI17647335, Length=363, Percent_Identity=32.2314049586777, Blast_Score=169, Evalue=4e-42,
Organism=Drosophila melanogaster, GI21355559, Length=381, Percent_Identity=33.5958005249344, Blast_Score=164, Evalue=1e-40,
Organism=Drosophila melanogaster, GI24642822, Length=384, Percent_Identity=30.46875, Blast_Score=154, Evalue=1e-37,
Organism=Drosophila melanogaster, GI24643725, Length=391, Percent_Identity=30.4347826086957, Blast_Score=150, Evalue=2e-36,
Organism=Drosophila melanogaster, GI20130173, Length=441, Percent_Identity=29.4784580498866, Blast_Score=148, Evalue=6e-36,
Organism=Drosophila melanogaster, GI24666101, Length=359, Percent_Identity=31.1977715877437, Blast_Score=144, Evalue=1e-34,
Organism=Drosophila melanogaster, GI24668515, Length=353, Percent_Identity=29.7450424929178, Blast_Score=134, Evalue=1e-31,
Organism=Drosophila melanogaster, GI18859659, Length=256, Percent_Identity=31.640625, Blast_Score=120, Evalue=3e-27,
Organism=Drosophila melanogaster, GI28571338, Length=256, Percent_Identity=31.640625, Blast_Score=120, Evalue=3e-27,
Organism=Drosophila melanogaster, GI19920478, Length=374, Percent_Identity=26.4705882352941, Blast_Score=108, Evalue=9e-24,
Organism=Drosophila melanogaster, GI24640164, Length=378, Percent_Identity=22.4867724867725, Blast_Score=97, Evalue=3e-20,
Organism=Drosophila melanogaster, GI17136666, Length=207, Percent_Identity=30.4347826086957, Blast_Score=78, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005580
- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 49651; Mature: 49651

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPKAFSSLRLKAPMLRNLASLGYAEMTPIQAHSLPLILAGKDVIARAKTGSGKTAAFGI
CCCCCCCHHEECCHHHHHHHHCCCHHCCCCCCCCCCEEEECCHHEEEECCCCCCCHHHHH
GLLSRLDALSFRVQALVLCPTRELADQVGKELRRLARFTDNIKILTICGGVPFGPQLGSL
HHHHHHHHHHEEEEEEEEECCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCC
EHGAHVVIGTPGRLLDHLRRGSLDLSALRTLVLDEADRMLDMGFQDDISALIAAAPPKRQ
CCCCEEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCC
TLLFSATYPDSIAAMSAGVQREPVEVSVDEVHGEGAIEQVFYEVDSGQRIEAVERILGHY
EEEEEECCCCHHHHHHCCCCCCCCEEEHHHHCCCCHHHHHHEECCCCCHHHHHHHHHHCC
RPESALIFCNTKLECQEVANALAVRGYAALAIHGDLDQRERDRVLVRFANRSASVLVATD
CCCCEEEEECCCCCHHHHHHHHHHCCEEEEEEECCCCCCCCCEEEEEEECCCCEEEEEEC
VAARGLDIKELSAVINYELTRNPEVHTHRIGRTGRAGERGLAVSLVTPRESRLIAAIADV
HHHCCCCHHHHHHHHCEEECCCCCCCEEECCCCCCCCCCCEEEEEECCCCCCEEEEEECC
PGSIIARGDLSTLAPLTAKPPLPPMVTLCIDGGRKNKLRPGDILGALTGEGGMPASEVGK
CCCEEECCCCHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCHHHCCC
IDVFDFFTYVAIARQSSEQALNFLRGHRIKGRFFKVRKAV
CHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEEECCC
>Mature Secondary Structure
MNPKAFSSLRLKAPMLRNLASLGYAEMTPIQAHSLPLILAGKDVIARAKTGSGKTAAFGI
CCCCCCCHHEECCHHHHHHHHCCCHHCCCCCCCCCCEEEECCHHEEEECCCCCCCHHHHH
GLLSRLDALSFRVQALVLCPTRELADQVGKELRRLARFTDNIKILTICGGVPFGPQLGSL
HHHHHHHHHHEEEEEEEEECCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCC
EHGAHVVIGTPGRLLDHLRRGSLDLSALRTLVLDEADRMLDMGFQDDISALIAAAPPKRQ
CCCCEEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCC
TLLFSATYPDSIAAMSAGVQREPVEVSVDEVHGEGAIEQVFYEVDSGQRIEAVERILGHY
EEEEEECCCCHHHHHHCCCCCCCCEEEHHHHCCCCHHHHHHEECCCCCHHHHHHHHHHCC
RPESALIFCNTKLECQEVANALAVRGYAALAIHGDLDQRERDRVLVRFANRSASVLVATD
CCCCEEEEECCCCCHHHHHHHHHHCCEEEEEEECCCCCCCCCEEEEEEECCCCEEEEEEC
VAARGLDIKELSAVINYELTRNPEVHTHRIGRTGRAGERGLAVSLVTPRESRLIAAIADV
HHHCCCCHHHHHHHHCEEECCCCCCCEEECCCCCCCCCCCEEEEEECCCCCCEEEEEECC
PGSIIARGDLSTLAPLTAKPPLPPMVTLCIDGGRKNKLRPGDILGALTGEGGMPASEVGK
CCCEEECCCCHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCHHHCCC
IDVFDFFTYVAIARQSSEQALNFLRGHRIKGRFFKVRKAV
CHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2216714; 8253085; 9097039; 9278503; 9016593; 11350034 [H]