| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39995252
Identifier: 39995252
GI number: 39995252
Start: 155890
End: 157056
Strand: Direct
Name: 39995252
Synonym: GSU0141
Alternate gene names: NA
Gene position: 155890-157056 (Clockwise)
Preceding gene: 39995251
Following gene: 39995253
Centisome position: 4.09
GC content: 65.55
Gene sequence:
>1167_bases TTGAAGATACTTTATTTCGACTGCTTTGCTGGCATTGCCGGCGACATGACCGTGGCGGCGCTCCTTGACCTGGGAGTTCC CTTCGAGGTGGTGCGCGATGCCGTGGGGTGTCTCCGCCTGCCTCATTCGAGCTACTCCCTTGCCACGGAGCGGACGAGCC GCAAAGGGATCACCGCCACCCGCTTCGTTGTGCATGTGGAAGAGCACCAGCCTAATCGGCACTACGGCGACATTGCCGCC ATGATCGAAGAGAGCCCCCTTGCCGACGGAATCAAGGAGAAGGCCCAGCGGATATTCTTCCGTCTGGCCGAGGCCGAGGC CAAGGTCCACGGCGTCGAGCTGGGACGGGTGCACTTTCACGAGGTGGGAGCGGTGGATTCCATCGCCGACATCGTCGGCG CCGCCGCAGCCATCGACTGGCTCGGGATCGAGTCCATCCACGGGGGGGCCCTGCCCCTGGGGAGCGGTTTCGTGGAAACA GCCCATGGACGTCTGCCGGTGCCGGCGCCCGCCACGGCTGAACTCCTGCGTGGCATCCCCGTTCATGGCGAGGCGGGGCC CGGTGAACGGGTTACGCCCACCGGGGCGGCCATCCTGGCGGCCCTGGCCGCCGGATTCGGACCGATTCCGCCCATGACCG TCACCGGCGTCGGCTGCGGAGCCGGAACCCGTGATTTCGCCGACATTCCAAATATCCTGCGTGTCTTCCAGGGAGAGATT GACAGAGGGTTCGAGCGGGACGACGTGGTGGTCATTGAGGCCCACATCGACGACACGAGCCCGGAGATTCTGGGATACGT CATGGAGCGCTGTCTTGCCGCCGGTGCTCTGGATGCCGCCTTTTCCCCCCTCCAGATGAAGAAGAACCGGCCCGCGGTCA GGCTCACGGTGGTGGTTCATCCCGAACAACGGGACGAACTTGCGGCGCTTATCCTGCGGGAAACTTCAGCCATCGGGGTG CGTTTCCACCCGGCGGGGCGGCTGAAGCTCCGGCGCCTCGTGGAGGAGCGGGATACGACCCTCGGCAGGGTGCGGGTGAA GGTCATCAATGGGGACGGGGTGGCGCGCGTGGCGCCCGAATACGACGATTGCTGCCGGATCGCCGCCGAGCGGGGCATGC CGCTCATGGAGGTCTACCGGATCGTTGAGCGGGAGTGCGGACAGTGA
Upstream 100 bases:
>100_bases ATGCTCAACTCCTGCGCCGCCGGCGTGACCGTAGTAAATATCGACAACGGGTTCGGTGCCGCCGTTGCAGCGAGCAAAAT CAACAGAGAATGAGGTCCGT
Downstream 100 bases:
>100_bases CCCGACGATTCGTGGTTATCGCCGCCACCTGGTTCGGCACGGGGCTGTCGCCCGTTGCCCCCGGGACGGTGGGAACCCTC GGCGCCATCCCCCTCTACCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 388; Mature: 388
Protein sequence:
>388_residues MKILYFDCFAGIAGDMTVAALLDLGVPFEVVRDAVGCLRLPHSSYSLATERTSRKGITATRFVVHVEEHQPNRHYGDIAA MIEESPLADGIKEKAQRIFFRLAEAEAKVHGVELGRVHFHEVGAVDSIADIVGAAAAIDWLGIESIHGGALPLGSGFVET AHGRLPVPAPATAELLRGIPVHGEAGPGERVTPTGAAILAALAAGFGPIPPMTVTGVGCGAGTRDFADIPNILRVFQGEI DRGFERDDVVVIEAHIDDTSPEILGYVMERCLAAGALDAAFSPLQMKKNRPAVRLTVVVHPEQRDELAALILRETSAIGV RFHPAGRLKLRRLVEERDTTLGRVRVKVINGDGVARVAPEYDDCCRIAAERGMPLMEVYRIVERECGQ
Sequences:
>Translated_388_residues MKILYFDCFAGIAGDMTVAALLDLGVPFEVVRDAVGCLRLPHSSYSLATERTSRKGITATRFVVHVEEHQPNRHYGDIAA MIEESPLADGIKEKAQRIFFRLAEAEAKVHGVELGRVHFHEVGAVDSIADIVGAAAAIDWLGIESIHGGALPLGSGFVET AHGRLPVPAPATAELLRGIPVHGEAGPGERVTPTGAAILAALAAGFGPIPPMTVTGVGCGAGTRDFADIPNILRVFQGEI DRGFERDDVVVIEAHIDDTSPEILGYVMERCLAAGALDAAFSPLQMKKNRPAVRLTVVVHPEQRDELAALILRETSAIGV RFHPAGRLKLRRLVEERDTTLGRVRVKVINGDGVARVAPEYDDCCRIAAERGMPLMEVYRIVERECGQ >Mature_388_residues MKILYFDCFAGIAGDMTVAALLDLGVPFEVVRDAVGCLRLPHSSYSLATERTSRKGITATRFVVHVEEHQPNRHYGDIAA MIEESPLADGIKEKAQRIFFRLAEAEAKVHGVELGRVHFHEVGAVDSIADIVGAAAAIDWLGIESIHGGALPLGSGFVET AHGRLPVPAPATAELLRGIPVHGEAGPGERVTPTGAAILAALAAGFGPIPPMTVTGVGCGAGTRDFADIPNILRVFQGEI DRGFERDDVVVIEAHIDDTSPEILGYVMERCLAAGALDAAFSPLQMKKNRPAVRLTVVVHPEQRDELAALILRETSAIGV RFHPAGRLKLRRLVEERDTTLGRVRVKVINGDGVARVAPEYDDCCRIAAERGMPLMEVYRIVERECGQ
Specific function: Unknown
COG id: COG1641
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0272 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y141_GEOSL (Q74GV3)
Other databases:
- EMBL: AE017180 - RefSeq: NP_951203.1 - ProteinModelPortal: Q74GV3 - SMR: Q74GV3 - GeneID: 2687980 - GenomeReviews: AE017180_GR - KEGG: gsu:GSU0141 - NMPDR: fig|243231.1.peg.141 - TIGR: GSU0141 - HOGENOM: HBG733311 - OMA: IVGTCLG - ProtClustDB: PRK04194 - BioCyc: GSUL243231:GSU_0141-MONOMER - HAMAP: MF_01074 - InterPro: IPR002822 - TIGRFAMs: TIGR00299
Pfam domain/function: PF01969 DUF111
EC number: NA
Molecular weight: Translated: 41718; Mature: 41718
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILYFDCFAGIAGDMTVAALLDLGVPFEVVRDAVGCLRLPHSSYSLATERTSRKGITAT CEEEEEEHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCEEE RFVVHVEEHQPNRHYGDIAAMIEESPLADGIKEKAQRIFFRLAEAEAKVHGVELGRVHFH EEEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEECCEEHH EVGAVDSIADIVGAAAAIDWLGIESIHGGALPLGSGFVETAHGRLPVPAPATAELLRGIP HHCCHHHHHHHHHHHHHHHHHCHHCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHCCCC VHGEAGPGERVTPTGAAILAALAAGFGPIPPMTVTGVGCGAGTRDFADIPNILRVFQGEI CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHH DRGFERDDVVVIEAHIDDTSPEILGYVMERCLAAGALDAAFSPLQMKKNRPAVRLTVVVH HCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEEEEEEEC PEQRDELAALILRETSAIGVRFHPAGRLKLRRLVEERDTTLGRVRVKVINGDGVARVAPE CCCHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCEEEEEEEEECCCCCEEECCC YDDCCRIAAERGMPLMEVYRIVERECGQ HHHHHHHHHHCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MKILYFDCFAGIAGDMTVAALLDLGVPFEVVRDAVGCLRLPHSSYSLATERTSRKGITAT CEEEEEEHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCEEE RFVVHVEEHQPNRHYGDIAAMIEESPLADGIKEKAQRIFFRLAEAEAKVHGVELGRVHFH EEEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEECCEEHH EVGAVDSIADIVGAAAAIDWLGIESIHGGALPLGSGFVETAHGRLPVPAPATAELLRGIP HHCCHHHHHHHHHHHHHHHHHCHHCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHCCCC VHGEAGPGERVTPTGAAILAALAAGFGPIPPMTVTGVGCGAGTRDFADIPNILRVFQGEI CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHH DRGFERDDVVVIEAHIDDTSPEILGYVMERCLAAGALDAAFSPLQMKKNRPAVRLTVVVH HCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEEEEEEEC PEQRDELAALILRETSAIGVRFHPAGRLKLRRLVEERDTTLGRVRVKVINGDGVARVAPE CCCHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCEEEEEEEEECCCCCEEECCC YDDCCRIAAERGMPLMEVYRIVERECGQ HHHHHHHHHHCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA