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The map label for this gene is atpF [H]

Identifier: 39995219

GI number: 39995219

Start: 123555

End: 123980

Strand: Direct

Name: atpF [H]

Synonym: GSU0108

Alternate gene names: 39995219

Gene position: 123555-123980 (Clockwise)

Preceding gene: 308513277

Following gene: 308513278

Centisome position: 3.24

GC content: 56.1

Gene sequence:

>426_bases
GTGATAAGTCTCGATCTTGCCTTTGTTATTCAGGTAATCAACTTCTTGGTTCTCATGATCATCCTGAACGTTTTTCTGTT
CAAGCCGATCAGGAAGGTTATCGCGGACCGGAAAGCGCAGATCGACGGATCCAGGGAACGCGCTGCGGTAGTCGACAAAG
AGGTGCAGGAGAAGATGGCCCTCTATGAGGCGCGCCTGCGCGATGTGAAGGCCAAGGCCGGTGCTGAGCGCGAGGTGCTG
CGTAAGGAGGCCCAGCAGGAGGAGTCGGCGATTCTTGAGAAGGCCCGGAAGGAAGCTGCCGATTCCCTTGCGTCCATCAA
GAGCCGGGTGGCCAAGGAAACCGTCGATGCCAAGGAGTTCCTGAAGGAGCAATCCCGTTCCCTGTCCCTTGAAATCTGCC
AGAAAGTGCTCGGGAGGAGTCTGTAA

Upstream 100 bases:

>100_bases
AGCTAACGTCTGTTTACGGCCACGCCAGAGTATTTTTTTTTAATACAGCCGATTTGTATACTGTATACAAAATTCAGTCG
GATCACGAACGGGGTGTAGA

Downstream 100 bases:

>100_bases
CAATGGCCTACGCGTTTAAGAAAAACGGGCTCCTGAAGCCTTTTGTGTCGACTGCCGCGATCTGCCTTCTGGTGGCCGGC
ACTGTTGTACTCTGCCATGC

Product: ATP synthase F0 subunit B'

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b [H]

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MISLDLAFVIQVINFLVLMIILNVFLFKPIRKVIADRKAQIDGSRERAAVVDKEVQEKMALYEARLRDVKAKAGAEREVL
RKEAQQEESAILEKARKEAADSLASIKSRVAKETVDAKEFLKEQSRSLSLEICQKVLGRSL

Sequences:

>Translated_141_residues
MISLDLAFVIQVINFLVLMIILNVFLFKPIRKVIADRKAQIDGSRERAAVVDKEVQEKMALYEARLRDVKAKAGAEREVL
RKEAQQEESAILEKARKEAADSLASIKSRVAKETVDAKEFLKEQSRSLSLEICQKVLGRSL
>Mature_141_residues
MISLDLAFVIQVINFLVLMIILNVFLFKPIRKVIADRKAQIDGSRERAAVVDKEVQEKMALYEARLRDVKAKAGAEREVL
RKEAQQEESAILEKARKEAADSLASIKSRVAKETVDAKEFLKEQSRSLSLEICQKVLGRSL

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) [H]

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002146
- InterPro:   IPR005864 [H]

Pfam domain/function: PF00430 ATP-synt_B [H]

EC number: 3.6.3.14

Molecular weight: Translated: 15942; Mature: 15942

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISLDLAFVIQVINFLVLMIILNVFLFKPIRKVIADRKAQIDGSRERAAVVDKEVQEKMA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LYEARLRDVKAKAGAEREVLRKEAQQEESAILEKARKEAADSLASIKSRVAKETVDAKEF
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKEQSRSLSLEICQKVLGRSL
HHHHHHCCHHHHHHHHHCCCC
>Mature Secondary Structure
MISLDLAFVIQVINFLVLMIILNVFLFKPIRKVIADRKAQIDGSRERAAVVDKEVQEKMA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LYEARLRDVKAKAGAEREVLRKEAQQEESAILEKARKEAADSLASIKSRVAKETVDAKEF
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKEQSRSLSLEICQKVLGRSL
HHHHHHCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA