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The map label for this gene is 39995173

Identifier: 39995173

GI number: 39995173

Start: 78940

End: 79272

Strand: Direct

Name: 39995173

Synonym: GSU0062

Alternate gene names: NA

Gene position: 78940-79272 (Clockwise)

Preceding gene: 39995172

Following gene: 39995174

Centisome position: 2.07

GC content: 57.36

Gene sequence:

>333_bases
TTGGATAACACCCCCTTCGTCAGGCAGCCATTGGACAAAAGGTGCGTCGGTTGGACGATTTTCAACGACTTAGAAACGAC
TATAGATATCCAGGCGCTCGCCGCGTCACTGATCCCGGCGGCAGCGGGCAACACAGACCCGTTCTGGAACGGCGCCGCTC
GTGATGTTTTCACCGGAATCCTTTCGTCGCTTTGGCGGGACAATTACCGGAGCAATCGTGGGATCTGGAACTCGCTCACG
GCTCCAATTGAGGAAATCGCCGAGATGATCCACGGTGTCGCCGGCGGGGAGGCTACCGTTACCACTGCCGGTACCAGGAT
GGTTTCGTGGTAA

Upstream 100 bases:

>100_bases
CCCCTCTTGACTCGCCTCCTTTCGAGGCCCCCGCTCACCCGGGACGTTCACCCTGTCTTAACAGCACAGTGATAAGCCAT
GGTCGAACATCGACATACCT

Downstream 100 bases:

>100_bases
CCGTTTCGCTGAACTCCCTCAAGACTCTTTGGAGTGGGCTAGGCATGCGGTTTCAGGAGGGATTCTGGATAAACGTCGAG
AAATAGCGGTTGACGATCGT

Product: TraD protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MDNTPFVRQPLDKRCVGWTIFNDLETTIDIQALAASLIPAAAGNTDPFWNGAARDVFTGILSSLWRDNYRSNRGIWNSLT
APIEEIAEMIHGVAGGEATVTTAGTRMVSW

Sequences:

>Translated_110_residues
MDNTPFVRQPLDKRCVGWTIFNDLETTIDIQALAASLIPAAAGNTDPFWNGAARDVFTGILSSLWRDNYRSNRGIWNSLT
APIEEIAEMIHGVAGGEATVTTAGTRMVSW
>Mature_110_residues
MDNTPFVRQPLDKRCVGWTIFNDLETTIDIQALAASLIPAAAGNTDPFWNGAARDVFTGILSSLWRDNYRSNRGIWNSLT
APIEEIAEMIHGVAGGEATVTTAGTRMVSW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12026; Mature: 12026

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNTPFVRQPLDKRCVGWTIFNDLETTIDIQALAASLIPAAAGNTDPFWNGAARDVFTGI
CCCCCCCCCCCCCHHCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
LSSLWRDNYRSNRGIWNSLTAPIEEIAEMIHGVAGGEATVTTAGTRMVSW
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEECCC
>Mature Secondary Structure
MDNTPFVRQPLDKRCVGWTIFNDLETTIDIQALAASLIPAAAGNTDPFWNGAARDVFTGI
CCCCCCCCCCCCCHHCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
LSSLWRDNYRSNRGIWNSLTAPIEEIAEMIHGVAGGEATVTTAGTRMVSW
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA