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The map label for this gene is 39995168

Identifier: 39995168

GI number: 39995168

Start: 72630

End: 74309

Strand: Direct

Name: 39995168

Synonym: GSU0057

Alternate gene names: NA

Gene position: 72630-74309 (Clockwise)

Preceding gene: 39995165

Following gene: 39995169

Centisome position: 1.9

GC content: 63.51

Gene sequence:

>1680_bases
ATGGCTGAGACAGACGGGAGTATTCCTCTCATCCCGGTTCGCATGCTCAACGAACACGTCTACTGCCCGCGACTGGCCTA
TCTCATGTGGGTGCAGGGTGAGTTCTCCCACAATGAGTTCACGGTTGATGGCGTTATCCGCCACCGCAGGGTCGATGCTG
GCGGCGGAGTGCTGCCCTCCGAGACCCAGGAGGATTCCAGGATACATGCCCGCTCGGTGAGTCTCAGCTCGGAACGGCTG
GGAATTACCGCCAAGATCGATCTGGTGGAAGGGGAGGGAGCATACGTTTCTCCTGTCGATTACAAGCGGGGCAAACGCCC
CCATGTGGCCGGCGGAGCATACGAGCCGGAGCGGGTTCAGCTCTGTGCCCAGGGGCTTCTTCTGCGGGAGCACGGATTTG
CCAGCGATGGCGGCGCTCTCTACTTCGTTGCCTCCCGCGAACGGGTGCCGGTTGCATTTGATGATGAACTGATCGGAAGA
ACCCTGGCCGCCATTGATGAGATGGGACGCACGGCGTTGTCGGGCACGATGCCCCCGCCGCTGGAGGACAGTCCCAAATG
CCCTCGCTGCTCGCTGGTGGGGATCTGTCTGCCGGATGAAGTGCGCTTTCTCTCCCATTTGTCGGTGGAGCCCCGCCCGA
TCATCCCGGCCGACGGGCGGGGGCTTCCTCTTTATGTCCAGTCGCCTAAGGCCTATGTGCGCAAGGACGGCGATTGCCTG
GTCATCGAAGAGGAGCGGGTACGGGTGGCCGAGGCCCGGTTGGGGGAGACGTCGCAGGTGGCGCTCTTCGGCAACGCGAC
CCTCACGACGGCGGCCCTCCACGAATGTCTGCGCCGGGAGATTCCCGTCACTTGGCTCTCCTACGGGGGCTGGTTCATGG
GGCATACCGTCAGCACGGGGCACCGCAATGTGGAAACCCGCACCTACCAGTACCAGCGGAGCTTTGATCCGGAGACCTGC
CTGAACCTCGCCCGGCGCTGGATCGTAGCCAAGATCGCCAACTGTCGGACGCTGCTGCGGCGCAACTGGCGGGGGGAAGG
TGACGAAGCAAAGGCGCCCCCCGGTCTGCTCATGTCGCTGCAGGATGACATGCGCCACGCAATGCGAGCCCCTTCGCTGG
AGGTGCTGCTCGGCATCGAGGGGGCTTCCGCCGGCCGCTACTTTCAGCATTTCAGCCGGATGCTCCGCGGTGGTGATGGC
GAAGGGATGGGTTTTGACTTCACCACCCGCAACCGCCGTCCGCCCAAGGATCCGGTCAATGCCCTGCTCTCCTTCGCCTA
TGCCATGCTCACCCGGGAGTGGACCGTGGCGCTCGCCGCCGTGGGACTCGATCCCTACCGGGGCTTCTACCATCAGCCCC
GCTTCGGCCGTCCGGCCCTGGCTCTTGACATGATGGAGCCGTTTCGGCCGCTGATCGCGGATTCAACGGTGCTTATGGCA
ATCAATAACGGCGAGATCCGCACCGGCGACTTCGTCCGTTCCGCCGGCGGCTGCAACCTGACCGACAGCGCACGCAAGCG
TTTCATCGCTGGGTTCGAGCGCCGTATGGAGCAGGAGGTGACACACCCCATCTTCAAGTACACAATCAGTTACCGGCGGC
TGCTGGAGGTGCAGGCGCGGCTTCTGACCCGTTACCTTTCGGGGGAGATCCCCGCCTATCCGAACTTTGTCACGAGGTGA

Upstream 100 bases:

>100_bases
ATGGAAAATTGTCCGGAGAGTGAGTGCATCTTAGCAAATATGGTTGATTTTTCCAATCATCCGTACTGCCGGTAGCCGTG
GCGGTCTTAAGGAGGGGACA

Downstream 100 bases:

>100_bases
GGGGATGGAGCATCTCTACATTGTGAGCTATGATATTCGCAACCAGCGCCGGTGGCGGCGGCTATTCAAGACCATGCACG
GCTTCGGCTGCTGGCTGCAA

Product: CRISPR-associated Cas1/Cas4 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 559; Mature: 558

Protein sequence:

>559_residues
MAETDGSIPLIPVRMLNEHVYCPRLAYLMWVQGEFSHNEFTVDGVIRHRRVDAGGGVLPSETQEDSRIHARSVSLSSERL
GITAKIDLVEGEGAYVSPVDYKRGKRPHVAGGAYEPERVQLCAQGLLLREHGFASDGGALYFVASRERVPVAFDDELIGR
TLAAIDEMGRTALSGTMPPPLEDSPKCPRCSLVGICLPDEVRFLSHLSVEPRPIIPADGRGLPLYVQSPKAYVRKDGDCL
VIEEERVRVAEARLGETSQVALFGNATLTTAALHECLRREIPVTWLSYGGWFMGHTVSTGHRNVETRTYQYQRSFDPETC
LNLARRWIVAKIANCRTLLRRNWRGEGDEAKAPPGLLMSLQDDMRHAMRAPSLEVLLGIEGASAGRYFQHFSRMLRGGDG
EGMGFDFTTRNRRPPKDPVNALLSFAYAMLTREWTVALAAVGLDPYRGFYHQPRFGRPALALDMMEPFRPLIADSTVLMA
INNGEIRTGDFVRSAGGCNLTDSARKRFIAGFERRMEQEVTHPIFKYTISYRRLLEVQARLLTRYLSGEIPAYPNFVTR

Sequences:

>Translated_559_residues
MAETDGSIPLIPVRMLNEHVYCPRLAYLMWVQGEFSHNEFTVDGVIRHRRVDAGGGVLPSETQEDSRIHARSVSLSSERL
GITAKIDLVEGEGAYVSPVDYKRGKRPHVAGGAYEPERVQLCAQGLLLREHGFASDGGALYFVASRERVPVAFDDELIGR
TLAAIDEMGRTALSGTMPPPLEDSPKCPRCSLVGICLPDEVRFLSHLSVEPRPIIPADGRGLPLYVQSPKAYVRKDGDCL
VIEEERVRVAEARLGETSQVALFGNATLTTAALHECLRREIPVTWLSYGGWFMGHTVSTGHRNVETRTYQYQRSFDPETC
LNLARRWIVAKIANCRTLLRRNWRGEGDEAKAPPGLLMSLQDDMRHAMRAPSLEVLLGIEGASAGRYFQHFSRMLRGGDG
EGMGFDFTTRNRRPPKDPVNALLSFAYAMLTREWTVALAAVGLDPYRGFYHQPRFGRPALALDMMEPFRPLIADSTVLMA
INNGEIRTGDFVRSAGGCNLTDSARKRFIAGFERRMEQEVTHPIFKYTISYRRLLEVQARLLTRYLSGEIPAYPNFVTR
>Mature_558_residues
AETDGSIPLIPVRMLNEHVYCPRLAYLMWVQGEFSHNEFTVDGVIRHRRVDAGGGVLPSETQEDSRIHARSVSLSSERLG
ITAKIDLVEGEGAYVSPVDYKRGKRPHVAGGAYEPERVQLCAQGLLLREHGFASDGGALYFVASRERVPVAFDDELIGRT
LAAIDEMGRTALSGTMPPPLEDSPKCPRCSLVGICLPDEVRFLSHLSVEPRPIIPADGRGLPLYVQSPKAYVRKDGDCLV
IEEERVRVAEARLGETSQVALFGNATLTTAALHECLRREIPVTWLSYGGWFMGHTVSTGHRNVETRTYQYQRSFDPETCL
NLARRWIVAKIANCRTLLRRNWRGEGDEAKAPPGLLMSLQDDMRHAMRAPSLEVLLGIEGASAGRYFQHFSRMLRGGDGE
GMGFDFTTRNRRPPKDPVNALLSFAYAMLTREWTVALAAVGLDPYRGFYHQPRFGRPALALDMMEPFRPLIADSTVLMAI
NNGEIRTGDFVRSAGGCNLTDSARKRFIAGFERRMEQEVTHPIFKYTISYRRLLEVQARLLTRYLSGEIPAYPNFVTR

Specific function: Unknown

COG id: COG1518

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002729
- InterPro:   IPR019858 [H]

Pfam domain/function: PF01867 DUF48 [H]

EC number: NA

Molecular weight: Translated: 62515; Mature: 62384

Theoretical pI: Translated: 8.11; Mature: 8.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAETDGSIPLIPVRMLNEHVYCPRLAYLMWVQGEFSHNEFTVDGVIRHRRVDAGGGVLPS
CCCCCCCCCEEEHHHHCCCCCCCCEEEEEEECCCCCCCCEEHHHHHHHEEECCCCCCCCC
ETQEDSRIHARSVSLSSERLGITAKIDLVEGEGAYVSPVDYKRGKRPHVAGGAYEPERVQ
CCCCCCCEEHEEEECCCCCCCEEEEEEEEECCCCEECCCHHCCCCCCCCCCCCCCHHHHH
LCAQGLLLREHGFASDGGALYFVASRERVPVAFDDELIGRTLAAIDEMGRTALSGTMPPP
HHHHHHHHHCCCCCCCCCEEEEEECCCCCCEEECHHHHHHHHHHHHHHCCHHHCCCCCCC
LEDSPKCPRCSLVGICLPDEVRFLSHLSVEPRPIIPADGRGLPLYVQSPKAYVRKDGDCL
CCCCCCCCCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCHHHHCCCCCEE
VIEEERVRVAEARLGETSQVALFGNATLTTAALHECLRREIPVTWLSYGGWFMGHTVSTG
EEEHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCEEECCEECCC
HRNVETRTYQYQRSFDPETCLNLARRWIVAKIANCRTLLRRNWRGEGDEAKAPPGLLMSL
CCCCCCEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHH
QDDMRHAMRAPSLEVLLGIEGASAGRYFQHFSRMLRGGDGEGMGFDFTTRNRRPPKDPVN
HHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCEECCCCCCCCHHHHH
ALLSFAYAMLTREWTVALAAVGLDPYRGFYHQPRFGRPALALDMMEPFRPLIADSTVLMA
HHHHHHHHHHHHHHHHHHEEECCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEE
INNGEIRTGDFVRSAGGCNLTDSARKRFIAGFERRMEQEVTHPIFKYTISYRRLLEVQAR
EECCCEECCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLTRYLSGEIPAYPNFVTR
HHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
AETDGSIPLIPVRMLNEHVYCPRLAYLMWVQGEFSHNEFTVDGVIRHRRVDAGGGVLPS
CCCCCCCCEEEHHHHCCCCCCCCEEEEEEECCCCCCCCEEHHHHHHHEEECCCCCCCCC
ETQEDSRIHARSVSLSSERLGITAKIDLVEGEGAYVSPVDYKRGKRPHVAGGAYEPERVQ
CCCCCCCEEHEEEECCCCCCCEEEEEEEEECCCCEECCCHHCCCCCCCCCCCCCCHHHHH
LCAQGLLLREHGFASDGGALYFVASRERVPVAFDDELIGRTLAAIDEMGRTALSGTMPPP
HHHHHHHHHCCCCCCCCCEEEEEECCCCCCEEECHHHHHHHHHHHHHHCCHHHCCCCCCC
LEDSPKCPRCSLVGICLPDEVRFLSHLSVEPRPIIPADGRGLPLYVQSPKAYVRKDGDCL
CCCCCCCCCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCHHHHCCCCCEE
VIEEERVRVAEARLGETSQVALFGNATLTTAALHECLRREIPVTWLSYGGWFMGHTVSTG
EEEHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCEEECCEECCC
HRNVETRTYQYQRSFDPETCLNLARRWIVAKIANCRTLLRRNWRGEGDEAKAPPGLLMSL
CCCCCCEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHH
QDDMRHAMRAPSLEVLLGIEGASAGRYFQHFSRMLRGGDGEGMGFDFTTRNRRPPKDPVN
HHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCEECCCCCCCCHHHHH
ALLSFAYAMLTREWTVALAAVGLDPYRGFYHQPRFGRPALALDMMEPFRPLIADSTVLMA
HHHHHHHHHHHHHHHHHHEEECCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEE
INNGEIRTGDFVRSAGGCNLTDSARKRFIAGFERRMEQEVTHPIFKYTISYRRLLEVQAR
EECCCEECCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLTRYLSGEIPAYPNFVTR
HHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]