Definition Geobacter sulfurreducens PCA chromosome, complete genome.
Accession NC_002939
Length 3,814,139

Click here to switch to the map view.

The map label for this gene is 39995164

Identifier: 39995164

GI number: 39995164

Start: 69225

End: 70316

Strand: Direct

Name: 39995164

Synonym: GSU0053

Alternate gene names: NA

Gene position: 69225-70316 (Clockwise)

Preceding gene: 39995163

Following gene: 39995165

Centisome position: 1.81

GC content: 54.03

Gene sequence:

>1092_bases
ATGAACGATCTCGTGCAGAAGTATGACCATTGGTTGGAAAACTCCGGACCTGCGGCACTGGTTATTCGCGAACAACTGAT
GCCCGTCGAGGGACGTGACGGTGTGCTGTTTCCAGCGACCTTTGCCGATACCGGCTACAACATCGACAAATTCGACGATG
GCGGCAATGTCTGCCTGATCGACAGTGTCGGGTCCCAGGCAAACAGGATCGAGCCGATCTTCATGACTAAGGATTACGCT
GGCCTTGTCCCCCAAATAGTGGTCCAGGCGGGAAACAAAAAAGTAAATCTTCTCGAAGCAGGGCATCGAGCCGGGGACGC
GATTATTCGCTGTTCTGAGTTGCAGCAAACCCTTAGGGCTGCGTTCAACAACGTTCTGAATGGCAATGCAGAGCCACTAG
CCCGTATAGCACCCACCTCGCTTGTGTTTGGCGTGTGGGATTCACGAGATACCCAAGCCAAATTGCCCAGACTCGTTGCC
TCGACCATAAGGGCCTACAATGTTCGCCCTCTCACCCGCTCTGCCCAGTATGTGCCGGCTGTTGACTACAACGCCGAAGG
GCTTTTGGAAGAGCCCGGTGACTTGCGAGATGCTGAAGGCAAAGTCAAGAGCAAGCACCCGTTTGCCCAACGCGGGTTTG
TGCATGTCCCGGCGACAGGTGCTCTCGGCGGCGTAATCGCCACCGGGGGGATTCGCCGTGACGCCACACTCCACCTTGCC
GCGCTCCGCTTGCTTTCGGCAGGCCAAGACGAAGCAAAGTCCAAGGCCCTTCGCCGCTATATACTCAGTCTTGCCTTAAC
AGCATTTACTGTGCCTGTAACTGGCTATCTGCGTCAGGGCTGCAATCTTGTGCTCGACCCTGAAAACCCCCTTGAGTTTA
AAGAGGTTTTTAATGATGGGACGCGCAATGACGTCGGTATTACGCACACCGAAGCGATTGTCTATGCAAAGGCAGTTGCA
AAGGAGTTTGGCATTGACCCCGAGCGTAACCTTGACGAAAAAAAAGCCCCGGATCGAGAAGTACCGTTTGACAAGGTACT
GGCGAAAAAAGATGTGAGCGATGCCGGAGGCTCTAAGAAAAAAGCAAAATGA

Upstream 100 bases:

>100_bases
TTGGGCCAGTTCGCCTAAAGGCATTTGAATTTCGACTGCTTTATCGCACTAAGTACCTGAAAAGTTTTCTTCCCGCAACC
CCAATTCAAAGGAGCTGACA

Downstream 100 bases:

>100_bases
GCGGGGGAATCCCATGAGTATGTACTTTGTATTGACAATCGCCTTTCTCGACGGCCGTTTCCACGGCAGGCGGGACGGTG
ACGAGCCGGAATGGCCTCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MNDLVQKYDHWLENSGPAALVIREQLMPVEGRDGVLFPATFADTGYNIDKFDDGGNVCLIDSVGSQANRIEPIFMTKDYA
GLVPQIVVQAGNKKVNLLEAGHRAGDAIIRCSELQQTLRAAFNNVLNGNAEPLARIAPTSLVFGVWDSRDTQAKLPRLVA
STIRAYNVRPLTRSAQYVPAVDYNAEGLLEEPGDLRDAEGKVKSKHPFAQRGFVHVPATGALGGVIATGGIRRDATLHLA
ALRLLSAGQDEAKSKALRRYILSLALTAFTVPVTGYLRQGCNLVLDPENPLEFKEVFNDGTRNDVGITHTEAIVYAKAVA
KEFGIDPERNLDEKKAPDREVPFDKVLAKKDVSDAGGSKKKAK

Sequences:

>Translated_363_residues
MNDLVQKYDHWLENSGPAALVIREQLMPVEGRDGVLFPATFADTGYNIDKFDDGGNVCLIDSVGSQANRIEPIFMTKDYA
GLVPQIVVQAGNKKVNLLEAGHRAGDAIIRCSELQQTLRAAFNNVLNGNAEPLARIAPTSLVFGVWDSRDTQAKLPRLVA
STIRAYNVRPLTRSAQYVPAVDYNAEGLLEEPGDLRDAEGKVKSKHPFAQRGFVHVPATGALGGVIATGGIRRDATLHLA
ALRLLSAGQDEAKSKALRRYILSLALTAFTVPVTGYLRQGCNLVLDPENPLEFKEVFNDGTRNDVGITHTEAIVYAKAVA
KEFGIDPERNLDEKKAPDREVPFDKVLAKKDVSDAGGSKKKAK
>Mature_363_residues
MNDLVQKYDHWLENSGPAALVIREQLMPVEGRDGVLFPATFADTGYNIDKFDDGGNVCLIDSVGSQANRIEPIFMTKDYA
GLVPQIVVQAGNKKVNLLEAGHRAGDAIIRCSELQQTLRAAFNNVLNGNAEPLARIAPTSLVFGVWDSRDTQAKLPRLVA
STIRAYNVRPLTRSAQYVPAVDYNAEGLLEEPGDLRDAEGKVKSKHPFAQRGFVHVPATGALGGVIATGGIRRDATLHLA
ALRLLSAGQDEAKSKALRRYILSLALTAFTVPVTGYLRQGCNLVLDPENPLEFKEVFNDGTRNDVGITHTEAIVYAKAVA
KEFGIDPERNLDEKKAPDREVPFDKVLAKKDVSDAGGSKKKAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39442; Mature: 39442

Theoretical pI: Translated: 7.59; Mature: 7.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDLVQKYDHWLENSGPAALVIREQLMPVEGRDGVLFPATFADTGYNIDKFDDGGNVCLI
CCHHHHHHHHHHCCCCCEEEEEHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEE
DSVGSQANRIEPIFMTKDYAGLVPQIVVQAGNKKVNLLEAGHRAGDAIIRCSELQQTLRA
ECCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCEEEEECCCCCCCHHHEEHHHHHHHHHH
AFNNVLNGNAEPLARIAPTSLVFGVWDSRDTQAKLPRLVASTIRAYNVRPLTRSAQYVPA
HHHHHHCCCCCHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
VDYNAEGLLEEPGDLRDAEGKVKSKHPFAQRGFVHVPATGALGGVIATGGIRRDATLHLA
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCEEECCCCCCCCCHHCCCCCCCCHHHHHH
ALRLLSAGQDEAKSKALRRYILSLALTAFTVPVTGYLRQGCNLVLDPENPLEFKEVFNDG
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHCCC
TRNDVGITHTEAIVYAKAVAKEFGIDPERNLDEKKAPDREVPFDKVLAKKDVSDAGGSKK
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCHHHHHHHHCCCCCCCCCC
KAK
CCC
>Mature Secondary Structure
MNDLVQKYDHWLENSGPAALVIREQLMPVEGRDGVLFPATFADTGYNIDKFDDGGNVCLI
CCHHHHHHHHHHCCCCCEEEEEHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEE
DSVGSQANRIEPIFMTKDYAGLVPQIVVQAGNKKVNLLEAGHRAGDAIIRCSELQQTLRA
ECCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCEEEEECCCCCCCHHHEEHHHHHHHHHH
AFNNVLNGNAEPLARIAPTSLVFGVWDSRDTQAKLPRLVASTIRAYNVRPLTRSAQYVPA
HHHHHHCCCCCHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
VDYNAEGLLEEPGDLRDAEGKVKSKHPFAQRGFVHVPATGALGGVIATGGIRRDATLHLA
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCEEECCCCCCCCCHHCCCCCCCCHHHHHH
ALRLLSAGQDEAKSKALRRYILSLALTAFTVPVTGYLRQGCNLVLDPENPLEFKEVFNDG
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHCCC
TRNDVGITHTEAIVYAKAVAKEFGIDPERNLDEKKAPDREVPFDKVLAKKDVSDAGGSKK
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCHHHHHHHHCCCCCCCCCC
KAK
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA