| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39995163
Identifier: 39995163
GI number: 39995163
Start: 68332
End: 69222
Strand: Direct
Name: 39995163
Synonym: GSU0052
Alternate gene names: NA
Gene position: 68332-69222 (Clockwise)
Preceding gene: 39995162
Following gene: 39995164
Centisome position: 1.79
GC content: 50.39
Gene sequence:
>891_bases ATGAGTTCGAATTCAAAGTCCGCAATCAGCATTCGCGTCGATCCCACCAACCCCGGCCAGTTCTTTGCTTGCTGCGGCCT GCTTGAATTGGCCGACCGGCTTTGGGATGGAGCGGAAGGATGGTTCGATAAGGATGGTTTCCTGTTCTCTTTAAGGCCAT ATCAAGAAAAAGCTCAGAAATGTGCCCCTGCAACACTTCTTGCCGAGATTACCCGGTGTCGCCTTACCAACACCATGTCA GATTCGGAGCTAAAACGCCGCGATCAGCTCATGGCTGTGCCGAAGAAGATAATCGAATCCGACCCTTCGCTTGAAGCCGA GAAGAAAGTTCTGGACAAGCTTTGGCGGGAAGCTCCTCTTGTACTTCATTCACCATTCAATATTCGTGTTGACTGGTTTC TCGACGAATATTGTGGTGGAACAATGTTCAAGACATGGGCCGGGCAGCAATCTGTATTTGAAATCGGGCGGGGAATGAAA GCAGCTTTGGATTCTGGGGATTGGAGTCATACGTCTCCGGATGACTGGTTGCGAAGACGCATGCTGAATGATTCTCTGCC GTTCAACTTCGATTCTGAACTTGGTGGAGTAGGGTCCGATCTCGACGTTGGATTCAGCTTTGACCCCTTGAAGACAATCA AAGTTCAGGCACGGCCACTCCTGGAGTTCCTTGCATTCGTCGGATTGCAGCGGTTCCGCCCCATGAAGATTAATGCCGAG AACCGGTTTCAGTATTTTCTTTGGTTCGGTCCTCTTGTCTCAGAGGTCGCTGCACCAGCGGCCTGTGGCCTGTTTGGGCC AGTTCGCCTAAAGGCATTTGAATTTCGACTGCTTTATCGCACTAAGTACCTGAAAAGTTTTCTTCCCGCAACCCCAATTC AAAGGAGCTGA
Upstream 100 bases:
>100_bases TTGAATCCTTGGTACGTGCTGCCGATGCCATGGCGTCACAATATGTCGCTGGTGAAGACCCCGCTTATGGCAATGCTGCG TTGTCCCTGGGAGGTGCCCA
Downstream 100 bases:
>100_bases CAATGAACGATCTCGTGCAGAAGTATGACCATTGGTTGGAAAACTCCGGACCTGCGGCACTGGTTATTCGCGAACAACTG ATGCCCGTCGAGGGACGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MSSNSKSAISIRVDPTNPGQFFACCGLLELADRLWDGAEGWFDKDGFLFSLRPYQEKAQKCAPATLLAEITRCRLTNTMS DSELKRRDQLMAVPKKIIESDPSLEAEKKVLDKLWREAPLVLHSPFNIRVDWFLDEYCGGTMFKTWAGQQSVFEIGRGMK AALDSGDWSHTSPDDWLRRRMLNDSLPFNFDSELGGVGSDLDVGFSFDPLKTIKVQARPLLEFLAFVGLQRFRPMKINAE NRFQYFLWFGPLVSEVAAPAACGLFGPVRLKAFEFRLLYRTKYLKSFLPATPIQRS
Sequences:
>Translated_296_residues MSSNSKSAISIRVDPTNPGQFFACCGLLELADRLWDGAEGWFDKDGFLFSLRPYQEKAQKCAPATLLAEITRCRLTNTMS DSELKRRDQLMAVPKKIIESDPSLEAEKKVLDKLWREAPLVLHSPFNIRVDWFLDEYCGGTMFKTWAGQQSVFEIGRGMK AALDSGDWSHTSPDDWLRRRMLNDSLPFNFDSELGGVGSDLDVGFSFDPLKTIKVQARPLLEFLAFVGLQRFRPMKINAE NRFQYFLWFGPLVSEVAAPAACGLFGPVRLKAFEFRLLYRTKYLKSFLPATPIQRS >Mature_295_residues SSNSKSAISIRVDPTNPGQFFACCGLLELADRLWDGAEGWFDKDGFLFSLRPYQEKAQKCAPATLLAEITRCRLTNTMSD SELKRRDQLMAVPKKIIESDPSLEAEKKVLDKLWREAPLVLHSPFNIRVDWFLDEYCGGTMFKTWAGQQSVFEIGRGMKA ALDSGDWSHTSPDDWLRRRMLNDSLPFNFDSELGGVGSDLDVGFSFDPLKTIKVQARPLLEFLAFVGLQRFRPMKINAEN RFQYFLWFGPLVSEVAAPAACGLFGPVRLKAFEFRLLYRTKYLKSFLPATPIQRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33658; Mature: 33527
Theoretical pI: Translated: 8.36; Mature: 8.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSNSKSAISIRVDPTNPGQFFACCGLLELADRLWDGAEGWFDKDGFLFSLRPYQEKAQK CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHH CAPATLLAEITRCRLTNTMSDSELKRRDQLMAVPKKIIESDPSLEAEKKVLDKLWREAPL CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCE VLHSPFNIRVDWFLDEYCGGTMFKTWAGQQSVFEIGRGMKAALDSGDWSHTSPDDWLRRR EEECCCCEEEEEEEHHHCCCCEEEHHCCCHHHHHHCCCHHHHHCCCCCCCCCHHHHHHHH MLNDSLPFNFDSELGGVGSDLDVGFSFDPLKTIKVQARPLLEFLAFVGLQRFRPMKINAE HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEHHHHHHHHHHHHHHHHCCCCEECCC NRFQYFLWFGPLVSEVAAPAACGLFGPVRLKAFEFRLLYRTKYLKSFLPATPIQRS CCEEEEEEHHHHHHHHHCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SSNSKSAISIRVDPTNPGQFFACCGLLELADRLWDGAEGWFDKDGFLFSLRPYQEKAQK CCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHH CAPATLLAEITRCRLTNTMSDSELKRRDQLMAVPKKIIESDPSLEAEKKVLDKLWREAPL CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCE VLHSPFNIRVDWFLDEYCGGTMFKTWAGQQSVFEIGRGMKAALDSGDWSHTSPDDWLRRR EEECCCCEEEEEEEHHHCCCCEEEHHCCCHHHHHHCCCHHHHHCCCCCCCCCHHHHHHHH MLNDSLPFNFDSELGGVGSDLDVGFSFDPLKTIKVQARPLLEFLAFVGLQRFRPMKINAE HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEHHHHHHHHHHHHHHHHCCCCEECCC NRFQYFLWFGPLVSEVAAPAACGLFGPVRLKAFEFRLLYRTKYLKSFLPATPIQRS CCEEEEEEHHHHHHHHHCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA