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The map label for this gene is 39995162

Identifier: 39995162

GI number: 39995162

Start: 65570

End: 68335

Strand: Direct

Name: 39995162

Synonym: GSU0051

Alternate gene names: NA

Gene position: 65570-68335 (Clockwise)

Preceding gene: 39995161

Following gene: 39995163

Centisome position: 1.72

GC content: 56.54

Gene sequence:

>2766_bases
ATGGTTGAACGGGGGATAACTATGTCGACATCTGAAGATTTTGAATCAAACTACAAACTCCTAACAGGTAATAGTCCTTT
CCCATGGCAGCGGAAGCTATTCACCATGTTTGTAGACAAACGGTTTCCAGAAACTTGCCCTGTCCCGACTGGCCTCGGGA
AAACTTCAATCATCGCAATCTGGCTTCTGGCAGTGGCCCACCATACCCGTAACGGCACAGTTACTGAATTTCCGCGGCGC
CTCGTCTATGTGGTGAACCGGAGAACCGTGGTGGACCAGGCTACGGATGAAGCCAGAAAAATGCTTGAAGCACTCATTAC
CAAGCCAGAACTCTGTGCTGTTGCTGATGTGCTGAGTTCGCTCGCGACCCGGGCTGATGCAGCACCTTTGGCGATCAGCA
CGCTACGAGGACAGTTCGCTGACAACGCGGAGTGGCGGGACGACCCGGCCCGGTCTGCCGTGATCGTCGGCACGGTGGAT
ATGATTGGCAGTCGATTGCTCTTTTCCGGTTACGGGTGTGGGTTCAAGTCCCGTCCGTTGCATGCTGGATTTCTCGGACA
GGACACCTTACTGGTTCATGACGAGGCCCACCTGGAGCCCGCATTTCAGGAGCTGGTATCGGCCATTGCATCGGAACAGC
AGCGCCGCCGCGACTTCTGGCAGTTACGAGTCATGGAACTAACGGCAACTTCTCGTTCTGACATTACTGACGCGAATACT
CTCTTTACAGGGGAAGACCGGAAACATGATGTGGCCCGGAAACGACTCGAAGCGAAAAAAGGGATTTCTTTTCATCCGGT
TGACGATGAAAAGAGGGTTACTGAGAAGGTTGAACAACTGACCAAAGGGTACAAAGACAGTGGGCAGGCAATTCTCGTCT
TTCTTCGCGGGGTCAAAGAGGTGATGAAGGTAGCGGCATTTCTGCGCAAGGTGGTGCCGGATGGTGTAGAGACCCTGACC
GGCACCCTGCGCGGCTTCGAGCGCGACACGTTGGCCAGGGAAAATGCCGTCTTTGCCCGCTTCATGCCTCACTCCGAAGC
GATACCACAGCAGGGCACCGTCTATCTCGTGTGTACCTCCGCCGGAGAAGTCGGGGTCAACATATCAGCGGATCATCTTG
TCTGCGACCTGACCCCCTTCGAAAGCATGATGCAACGCTTTGGACGGGTGAATCGATTTGGTGATGGCAATGCACATATC
GACGTCGTTCATCGCCCATTCGGAAAGGGCTCTGGTTTCGACGAATCTGCGCCCGCCGCATTGGACGATGATCCGTCAGC
GGGGGCCGCCAGCCAGGACGATCTAACTGCCGACGCGGCGCCCAAGAAGAAAGAGAAACCGTTGTCACCTTTTGATCGGG
CTTGCGCACAAACGCTGTCCGTGTTGAAGCAACTGCCCTTGCGTGAAGACCGGCGTCGCGATGCGAGCCCTGCGGCACTA
AGCGAAATACCCCTTGCCGACCGGCAAGCTGCTTTCACGCCACCTCCCGTCATTCTTCCGATAAGTGACATTCTTTTCGA
TGTCTGGGCGCTGACCTCGGTTCGCCAGAAACTGCCCGGCCGACCGCCAGTTGCCGATTGGCTGCATGGCGTTACCGAAT
GGGAGCCGCCTGCAACCCATGTTGCATGGCGGGATGAGGTCTATCTGGTCAGCGGCATGTTGGAGATCTGTCCGCCCGAA
GACCTGCTTGAAGACTATCCCCTCAAGCCTCACGAATTGTTGCGCGACCAGACCACACGGGTGTTTTCCGAGCTTGAGAA
AATCGCCAGCCGATGTCCGGCAAAGCCTGTATGGCTTCTCAACGCTGACGGCAAGGTTGACGTGCTTCCCTTGGAGAAAT
TAGTCGATAGGGACAAGCTGAGACTGGCCGACTGTACTGTGTTGCTGCCGCCAGCGGTTGGTGGCCTCGACGGAGGCATG
CTCAACGGTGATGCCGCTTATGACCCCAAGGTGGTTTATGACATAGCAGATCAATGGTTGGGCGAGAACGACAGGCCGCG
TCGTTGCCGCCTTTGGGACAACGAGGGCCCTTTATCAGGAATGCGGCTTGTGCGAACTATCGACGTGCGCCCCGATGCCG
AAGAACAGGAGGAAGAAAGCGCAGAATCAACTATACGGCGGTGCTGGCATTGGTATGTACGGCCCCGCTCCGCTGACGAT
GATGGCTCAAGGACGGCACGAGTAAATCAGGAACTGACATCCCACCTTCGGTCTGCCGAAGACTTCGCCAAGAAGCTCGT
CGACAGGCTCGGCTTGGGCGCGCTGGAAGCAAAGGCGGTAGTCTTGGCAGCGCGCTGGCATGACCTCGGCAAAGATCGCC
TGATCTGGCAGCGCTCCATCGGTAATCGTGACTACCCTGGGCTTGTCCTGGCGAAGTCCGGGTCCGGAATGCGGCCTATC
GATCTCAGCGACTATCGGCATGAGCTCGGATCACTTATCGACATATCCAACTACCCGGAGTTTCTTGAATTGTCTGAGGA
GTTACAAGATCTCGTTCTGCATCTGGTCGCAGCCCATCATGGCCGGGCTCGGCCCCACTTCCCGGAAAAGGAAACGTTTG
ATTATGACCGGTCAGAAGAGGCCGTAGCGGCTATCGTCAGTGAGGTCCCCCGCCGTTATGGCCGGTTGCAGCGGAAATAC
GGCCGGTGGGGGCTTGCCTATCTTGAATCCTTGGTACGTGCTGCCGATGCCATGGCGTCACAATATGTCGCTGGTGAAGA
CCCCGCTTATGGCAATGCTGCGTTGTCCCTGGGAGGTGCCCAATGA

Upstream 100 bases:

>100_bases
ACCAAGGCGTTACAACGAGGGCTGAGATTGTGGAAATAGATGCATTGGCTCCTCCTTGGGAGAGAGTGCTGGTGAGGGTT
TGGCAGGAGGTGTGAGGAAA

Downstream 100 bases:

>100_bases
GTTCGAATTCAAAGTCCGCAATCAGCATTCGCGTCGATCCCACCAACCCCGGCCAGTTCTTTGCTTGCTGCGGCCTGCTT
GAATTGGCCGACCGGCTTTG

Product: CRISPR-associated HD domain-containing protein

Products: NA

Alternate protein names: CRISPR-AssociatedhD Domain Protein; CRISPR-Associated Helicase Cas3 Family Protein; CRISPR-Associated Helicase Cas3 Family Protein Protein; Helicase; CRISPR-Associated HD Domain-Containing Protein; CRISPR-Associated HD Domain Protein

Number of amino acids: Translated: 921; Mature: 921

Protein sequence:

>921_residues
MVERGITMSTSEDFESNYKLLTGNSPFPWQRKLFTMFVDKRFPETCPVPTGLGKTSIIAIWLLAVAHHTRNGTVTEFPRR
LVYVVNRRTVVDQATDEARKMLEALITKPELCAVADVLSSLATRADAAPLAISTLRGQFADNAEWRDDPARSAVIVGTVD
MIGSRLLFSGYGCGFKSRPLHAGFLGQDTLLVHDEAHLEPAFQELVSAIASEQQRRRDFWQLRVMELTATSRSDITDANT
LFTGEDRKHDVARKRLEAKKGISFHPVDDEKRVTEKVEQLTKGYKDSGQAILVFLRGVKEVMKVAAFLRKVVPDGVETLT
GTLRGFERDTLARENAVFARFMPHSEAIPQQGTVYLVCTSAGEVGVNISADHLVCDLTPFESMMQRFGRVNRFGDGNAHI
DVVHRPFGKGSGFDESAPAALDDDPSAGAASQDDLTADAAPKKKEKPLSPFDRACAQTLSVLKQLPLREDRRRDASPAAL
SEIPLADRQAAFTPPPVILPISDILFDVWALTSVRQKLPGRPPVADWLHGVTEWEPPATHVAWRDEVYLVSGMLEICPPE
DLLEDYPLKPHELLRDQTTRVFSELEKIASRCPAKPVWLLNADGKVDVLPLEKLVDRDKLRLADCTVLLPPAVGGLDGGM
LNGDAAYDPKVVYDIADQWLGENDRPRRCRLWDNEGPLSGMRLVRTIDVRPDAEEQEEESAESTIRRCWHWYVRPRSADD
DGSRTARVNQELTSHLRSAEDFAKKLVDRLGLGALEAKAVVLAARWHDLGKDRLIWQRSIGNRDYPGLVLAKSGSGMRPI
DLSDYRHELGSLIDISNYPEFLELSEELQDLVLHLVAAHHGRARPHFPEKETFDYDRSEEAVAAIVSEVPRRYGRLQRKY
GRWGLAYLESLVRAADAMASQYVAGEDPAYGNAALSLGGAQ

Sequences:

>Translated_921_residues
MVERGITMSTSEDFESNYKLLTGNSPFPWQRKLFTMFVDKRFPETCPVPTGLGKTSIIAIWLLAVAHHTRNGTVTEFPRR
LVYVVNRRTVVDQATDEARKMLEALITKPELCAVADVLSSLATRADAAPLAISTLRGQFADNAEWRDDPARSAVIVGTVD
MIGSRLLFSGYGCGFKSRPLHAGFLGQDTLLVHDEAHLEPAFQELVSAIASEQQRRRDFWQLRVMELTATSRSDITDANT
LFTGEDRKHDVARKRLEAKKGISFHPVDDEKRVTEKVEQLTKGYKDSGQAILVFLRGVKEVMKVAAFLRKVVPDGVETLT
GTLRGFERDTLARENAVFARFMPHSEAIPQQGTVYLVCTSAGEVGVNISADHLVCDLTPFESMMQRFGRVNRFGDGNAHI
DVVHRPFGKGSGFDESAPAALDDDPSAGAASQDDLTADAAPKKKEKPLSPFDRACAQTLSVLKQLPLREDRRRDASPAAL
SEIPLADRQAAFTPPPVILPISDILFDVWALTSVRQKLPGRPPVADWLHGVTEWEPPATHVAWRDEVYLVSGMLEICPPE
DLLEDYPLKPHELLRDQTTRVFSELEKIASRCPAKPVWLLNADGKVDVLPLEKLVDRDKLRLADCTVLLPPAVGGLDGGM
LNGDAAYDPKVVYDIADQWLGENDRPRRCRLWDNEGPLSGMRLVRTIDVRPDAEEQEEESAESTIRRCWHWYVRPRSADD
DGSRTARVNQELTSHLRSAEDFAKKLVDRLGLGALEAKAVVLAARWHDLGKDRLIWQRSIGNRDYPGLVLAKSGSGMRPI
DLSDYRHELGSLIDISNYPEFLELSEELQDLVLHLVAAHHGRARPHFPEKETFDYDRSEEAVAAIVSEVPRRYGRLQRKY
GRWGLAYLESLVRAADAMASQYVAGEDPAYGNAALSLGGAQ
>Mature_921_residues
MVERGITMSTSEDFESNYKLLTGNSPFPWQRKLFTMFVDKRFPETCPVPTGLGKTSIIAIWLLAVAHHTRNGTVTEFPRR
LVYVVNRRTVVDQATDEARKMLEALITKPELCAVADVLSSLATRADAAPLAISTLRGQFADNAEWRDDPARSAVIVGTVD
MIGSRLLFSGYGCGFKSRPLHAGFLGQDTLLVHDEAHLEPAFQELVSAIASEQQRRRDFWQLRVMELTATSRSDITDANT
LFTGEDRKHDVARKRLEAKKGISFHPVDDEKRVTEKVEQLTKGYKDSGQAILVFLRGVKEVMKVAAFLRKVVPDGVETLT
GTLRGFERDTLARENAVFARFMPHSEAIPQQGTVYLVCTSAGEVGVNISADHLVCDLTPFESMMQRFGRVNRFGDGNAHI
DVVHRPFGKGSGFDESAPAALDDDPSAGAASQDDLTADAAPKKKEKPLSPFDRACAQTLSVLKQLPLREDRRRDASPAAL
SEIPLADRQAAFTPPPVILPISDILFDVWALTSVRQKLPGRPPVADWLHGVTEWEPPATHVAWRDEVYLVSGMLEICPPE
DLLEDYPLKPHELLRDQTTRVFSELEKIASRCPAKPVWLLNADGKVDVLPLEKLVDRDKLRLADCTVLLPPAVGGLDGGM
LNGDAAYDPKVVYDIADQWLGENDRPRRCRLWDNEGPLSGMRLVRTIDVRPDAEEQEEESAESTIRRCWHWYVRPRSADD
DGSRTARVNQELTSHLRSAEDFAKKLVDRLGLGALEAKAVVLAARWHDLGKDRLIWQRSIGNRDYPGLVLAKSGSGMRPI
DLSDYRHELGSLIDISNYPEFLELSEELQDLVLHLVAAHHGRARPHFPEKETFDYDRSEEAVAAIVSEVPRRYGRLQRKY
GRWGLAYLESLVRAADAMASQYVAGEDPAYGNAALSLGGAQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 102536; Mature: 102536

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVERGITMSTSEDFESNYKLLTGNSPFPWQRKLFTMFVDKRFPETCPVPTGLGKTSIIAI
CCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
WLLAVAHHTRNGTVTEFPRRLVYVVNRRTVVDQATDEARKMLEALITKPELCAVADVLSS
HHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LATRADAAPLAISTLRGQFADNAEWRDDPARSAVIVGTVDMIGSRLLFSGYGCGFKSRPL
HHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHCCCCCCCCCCC
HAGFLGQDTLLVHDEAHLEPAFQELVSAIASEQQRRRDFWQLRVMELTATSRSDITDANT
CCCCCCCCEEEEECHHHCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCC
LFTGEDRKHDVARKRLEAKKGISFHPVDDEKRVTEKVEQLTKGYKDSGQAILVFLRGVKE
EECCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
VMKVAAFLRKVVPDGVETLTGTLRGFERDTLARENAVFARFMPHSEAIPQQGTVYLVCTS
HHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHCCHHEEECCCCCCCCCCCCEEEEEEC
AGEVGVNISADHLVCDLTPFESMMQRFGRVNRFGDGNAHIDVVHRPFGKGSGFDESAPAA
CCCCCCEECCCCEEEECCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCC
LDDDPSAGAASQDDLTADAAPKKKEKPLSPFDRACAQTLSVLKQLPLREDRRRDASPAAL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHH
SEIPLADRQAAFTPPPVILPISDILFDVWALTSVRQKLPGRPPVADWLHGVTEWEPPATH
HHCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCC
VAWRDEVYLVSGMLEICPPEDLLEDYPLKPHELLRDQTTRVFSELEKIASRCPAKPVWLL
EEECCCEEEEECHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
NADGKVDVLPLEKLVDRDKLRLADCTVLLPPAVGGLDGGMLNGDAAYDPKVVYDIADQWL
ECCCCEEEECHHHHHCCCCEEHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHC
GENDRPRRCRLWDNEGPLSGMRLVRTIDVRPDAEEQEEESAESTIRRCWHWYVRPRSADD
CCCCCCCEEEECCCCCCCCHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
DGSRTARVNQELTSHLRSAEDFAKKLVDRLGLGALEAKAVVLAARWHDLGKDRLIWQRSI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHC
GNRDYPGLVLAKSGSGMRPIDLSDYRHELGSLIDISNYPEFLELSEELQDLVLHLVAAHH
CCCCCCCEEEEECCCCCCCCCHHHHHHHHHCEEECCCCHHHHHHHHHHHHHHHHHHHHHC
GRARPHFPEKETFDYDRSEEAVAAIVSEVPRRYGRLQRKYGRWGLAYLESLVRAADAMAS
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
QYVAGEDPAYGNAALSLGGAQ
HHCCCCCCCCCCCEEECCCCC
>Mature Secondary Structure
MVERGITMSTSEDFESNYKLLTGNSPFPWQRKLFTMFVDKRFPETCPVPTGLGKTSIIAI
CCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
WLLAVAHHTRNGTVTEFPRRLVYVVNRRTVVDQATDEARKMLEALITKPELCAVADVLSS
HHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LATRADAAPLAISTLRGQFADNAEWRDDPARSAVIVGTVDMIGSRLLFSGYGCGFKSRPL
HHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHCCCCCCCCCCC
HAGFLGQDTLLVHDEAHLEPAFQELVSAIASEQQRRRDFWQLRVMELTATSRSDITDANT
CCCCCCCCEEEEECHHHCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCC
LFTGEDRKHDVARKRLEAKKGISFHPVDDEKRVTEKVEQLTKGYKDSGQAILVFLRGVKE
EECCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
VMKVAAFLRKVVPDGVETLTGTLRGFERDTLARENAVFARFMPHSEAIPQQGTVYLVCTS
HHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHCCHHEEECCCCCCCCCCCCEEEEEEC
AGEVGVNISADHLVCDLTPFESMMQRFGRVNRFGDGNAHIDVVHRPFGKGSGFDESAPAA
CCCCCCEECCCCEEEECCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCC
LDDDPSAGAASQDDLTADAAPKKKEKPLSPFDRACAQTLSVLKQLPLREDRRRDASPAAL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHH
SEIPLADRQAAFTPPPVILPISDILFDVWALTSVRQKLPGRPPVADWLHGVTEWEPPATH
HHCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCC
VAWRDEVYLVSGMLEICPPEDLLEDYPLKPHELLRDQTTRVFSELEKIASRCPAKPVWLL
EEECCCEEEEECHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
NADGKVDVLPLEKLVDRDKLRLADCTVLLPPAVGGLDGGMLNGDAAYDPKVVYDIADQWL
ECCCCEEEECHHHHHCCCCEEHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHC
GENDRPRRCRLWDNEGPLSGMRLVRTIDVRPDAEEQEEESAESTIRRCWHWYVRPRSADD
CCCCCCCEEEECCCCCCCCHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
DGSRTARVNQELTSHLRSAEDFAKKLVDRLGLGALEAKAVVLAARWHDLGKDRLIWQRSI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHC
GNRDYPGLVLAKSGSGMRPIDLSDYRHELGSLIDISNYPEFLELSEELQDLVLHLVAAHH
CCCCCCCEEEEECCCCCCCCCHHHHHHHHHCEEECCCCHHHHHHHHHHHHHHHHHHHHHC
GRARPHFPEKETFDYDRSEEAVAAIVSEVPRRYGRLQRKYGRWGLAYLESLVRAADAMAS
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
QYVAGEDPAYGNAALSLGGAQ
HHCCCCCCCCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA