Click here to switch to the map view.

The map label for this gene is tolR [H]

Identifier: 39995138

GI number: 39995138

Start: 37322

End: 37741

Strand: Reverse

Name: tolR [H]

Synonym: GSU0027

Alternate gene names: 39995138

Gene position: 37741-37322 (Counterclockwise)

Preceding gene: 39995139

Following gene: 39995137

Centisome position: 0.99

GC content: 59.76

Gene sequence:

>420_bases
ATGGAAGTCGGCAGCAGAAACAGCGGCGACCGCGGCACCATGTCGCAGATCAACGTAACCCCCTTGGTTGACGTCATGCT
CGTGCTCCTCATCATTTTCATGGTGACCGCGCCCATGATGCAGCAGGGGGTCCAGGTAAACCTTCCCAAAGCCGAGACCA
AGGCCATGACCGCCCAGGACGAGGCAGTAGTGGTCTCCATCGACCGGGCCGGCAAGGTGTTCGTGAACAGCACCGAAGTG
GCCTCCGGCGACCTAACGGCCAAGCTGACCGCCATGGTGGCAAACCGGGCCAAGAAAGAGGTTTTCCTGAAGGCTGACCG
GGATGTCCCTTACGGTCAGGTGGTCAAAACCATGGCTGAAATCAAAGGTGCCGGCATTGAGCGTCTTGGCATGGTGACGG
AGCCCGCGCCGGGAAAATGA

Upstream 100 bases:

>100_bases
CCAGCACAAAATCAAGGTCCTCATCGCCTCCATGGACAACTTCTCCACCGAGTTCCTCAACATCGTCCAGCGGACCTTTG
CGGGAAAATAGGGAGTCAGT

Downstream 100 bases:

>100_bases
ACCGCAGTATCGCACATCGAGAACCGGGCCTTGGCTGGGGGTTGGCGGCATCGGCTATGCTCCACTTGGCCCTCGCTGCT
CTTGCCCTTGTGGCCCAGTT

Product: TolR protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MEVGSRNSGDRGTMSQINVTPLVDVMLVLLIIFMVTAPMMQQGVQVNLPKAETKAMTAQDEAVVVSIDRAGKVFVNSTEV
ASGDLTAKLTAMVANRAKKEVFLKADRDVPYGQVVKTMAEIKGAGIERLGMVTEPAPGK

Sequences:

>Translated_139_residues
MEVGSRNSGDRGTMSQINVTPLVDVMLVLLIIFMVTAPMMQQGVQVNLPKAETKAMTAQDEAVVVSIDRAGKVFVNSTEV
ASGDLTAKLTAMVANRAKKEVFLKADRDVPYGQVVKTMAEIKGAGIERLGMVTEPAPGK
>Mature_139_residues
MEVGSRNSGDRGTMSQINVTPLVDVMLVLLIIFMVTAPMMQQGVQVNLPKAETKAMTAQDEAVVVSIDRAGKVFVNSTEV
ASGDLTAKLTAMVANRAKKEVFLKADRDVPYGQVVKTMAEIKGAGIERLGMVTEPAPGK

Specific function: Involved in the tonB-independent uptake of proteins [H]

COG id: COG0848

COG function: function code U; Biopolymer transport protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbD/tolR family [H]

Homologues:

Organism=Escherichia coli, GI1789380, Length=130, Percent_Identity=35.3846153846154, Blast_Score=90, Evalue=7e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014168
- InterPro:   IPR003400 [H]

Pfam domain/function: PF02472 ExbD [H]

EC number: NA

Molecular weight: Translated: 14822; Mature: 14822

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.2 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.2 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVGSRNSGDRGTMSQINVTPLVDVMLVLLIIFMVTAPMMQQGVQVNLPKAETKAMTAQD
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHCCCCC
EAVVVSIDRAGKVFVNSTEVASGDLTAKLTAMVANRAKKEVFLKADRDVPYGQVVKTMAE
CEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHH
IKGAGIERLGMVTEPAPGK
HCCCCHHHHCCCCCCCCCC
>Mature Secondary Structure
MEVGSRNSGDRGTMSQINVTPLVDVMLVLLIIFMVTAPMMQQGVQVNLPKAETKAMTAQD
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHCCCCC
EAVVVSIDRAGKVFVNSTEVASGDLTAKLTAMVANRAKKEVFLKADRDVPYGQVVKTMAE
CEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHH
IKGAGIERLGMVTEPAPGK
HCCCCHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8955385; 10984043 [H]