| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 308513328
Identifier: 308513328
GI number: 308513328
Start: 2987509
End: 2988765
Strand: Reverse
Name: 308513328
Synonym: NA
Alternate gene names: NA
Gene position: 2988765-2987509 (Counterclockwise)
Preceding gene: 39997805
Following gene: 39997803
Centisome position: 78.36
GC content: 61.18
Gene sequence:
>1257_bases GTGGCCGCGTCCCAGGAGCCAACGCAAGAGAGTGAACCGGCTTGGGCGCCTCAGCAGGCCCAGGCTCCGTCATTTGCTCC CGCTGATTCTGATGCCGAGGAAGCCGCCGACAACCTGGCGGTTTCCTCGGGAATACCTTCAGGCCCGGCCGCTACTGATG AGGATTTTTCGTTCGACTTCGGCGGAGAACCAACGGCAGGGAGCGAAAACCAGGCGGGGCAGTCAACTGCTTCGGAGCCG GAGGTGTTTGATTTCGGTGGATTCGAAGAGGAGTCTGTCACGGAAGAGCAGTCGCGGCCGGCCGAACCTGAAGCTGCGTC TGCCGTTGGCGGATTCGGGGACGGGATCGCCTTTGGCGAGGTGAGTCCCGAGGCCTTTGCTGCCGCGACTGATGCGGGGG GGCGGGAAGAAGGTTCCACCGGCGACTTTGCTTTGGAGTTCGAGGAGGGGGTGGCAAAAGAAGATGCCTCCCCGAAGATC GAGGCTGAAGAAGAAGCGGAACCTTTCGATTTCGGTGAGCTTGATCTCGGTATTGATGAGACTGCGCCGGAGCCCGAGCC CCGTGATCGCACCCAGCAGGCGACAGTCGCAGCGGTTCCTGAGCAGCCTGTGACTGAACCCGCTGTAACGACAGCACCGT TGTCCCCCCTTGATGTTCCCTTTGGAGAGGAGGAGGCTCCACCTCTTGTCATCTCGTCACGCCGCAAGGGGCGCTCCCTG CTTCCCCTCGTTGCCATTGTGGTGTCGGTCCTCGTGATCGTAGCCCTTGCCGGGTTCGGCTTCTACTTCTTCAAGGAGGG CCCTGCCGCCTTCAATAAGCTCGGCATCGGCTTTGTGGCCGAGTGGCTCGGATTTGAAGCGCGGGAGGAGGGAGGGATCG GCCTTGACAAGGTCAGAGGGGGGTATCTGGCCAACGCGGAGGCGGGAGAGGTTTTCGTGATTCGCGGCGAAGCCATTAAT AACTACCGCAAGCCCCGGGCGTCCATCCAGGTGAAGGGCGCGCTGCTGGGGTCGGGAGGCCAGGCGGTCGTGCAAAAGAT TGCCTACTGCGGCAACAGCCTGAGCGACGAACAGATAGCCTCGCTCCCCATGGCAAAGATCGAGTCAGCCATGAATAACC AGTTCGGCGATTCCCTGTCGAACCTGGGAGTCCAGCCGGGTAAGAGGATCCCCTTTGTGATTGTTCTGGCAAATATCCCC CGGGAGGCGACTGATTTCACCGTGGAGGTGACCGGTTCAACTGTTGCCACCCAGTGA
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: hypothetical protein
Products: NA
Alternate protein names: Zinc Finger/Thioredoxin; ATPase
Number of amino acids: Translated: 418; Mature: 417
Protein sequence:
NA
Sequences:
>Translated_418_residues MAASQEPTQESEPAWAPQQAQAPSFAPADSDAEEAADNLAVSSGIPSGPAATDEDFSFDFGGEPTAGSENQAGQSTASEP EVFDFGGFEEESVTEEQSRPAEPEAASAVGGFGDGIAFGEVSPEAFAAATDAGGREEGSTGDFALEFEEGVAKEDASPKI EAEEEAEPFDFGELDLGIDETAPEPEPRDRTQQATVAAVPEQPVTEPAVTTAPLSPLDVPFGEEEAPPLVISSRRKGRSL LPLVAIVVSVLVIVALAGFGFYFFKEGPAAFNKLGIGFVAEWLGFEAREEGGIGLDKVRGGYLANAEAGEVFVIRGEAIN NYRKPRASIQVKGALLGSGGQAVVQKIAYCGNSLSDEQIASLPMAKIESAMNNQFGDSLSNLGVQPGKRIPFVIVLANIP REATDFTVEVTGSTVATQ >Mature_417_residues AASQEPTQESEPAWAPQQAQAPSFAPADSDAEEAADNLAVSSGIPSGPAATDEDFSFDFGGEPTAGSENQAGQSTASEPE VFDFGGFEEESVTEEQSRPAEPEAASAVGGFGDGIAFGEVSPEAFAAATDAGGREEGSTGDFALEFEEGVAKEDASPKIE AEEEAEPFDFGELDLGIDETAPEPEPRDRTQQATVAAVPEQPVTEPAVTTAPLSPLDVPFGEEEAPPLVISSRRKGRSLL PLVAIVVSVLVIVALAGFGFYFFKEGPAAFNKLGIGFVAEWLGFEAREEGGIGLDKVRGGYLANAEAGEVFVIRGEAINN YRKPRASIQVKGALLGSGGQAVVQKIAYCGNSLSDEQIASLPMAKIESAMNNQFGDSLSNLGVQPGKRIPFVIVLANIPR EATDFTVEVTGSTVATQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43526; Mature: 43395
Theoretical pI: Translated: 3.79; Mature: 3.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAASQEPTQESEPAWAPQQAQAPSFAPADSDAEEAADNLAVSSGIPSGPAATDEDFSFDF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC GGEPTAGSENQAGQSTASEPEVFDFGGFEEESVTEEQSRPAEPEAASAVGGFGDGIAFGE CCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCC VSPEAFAAATDAGGREEGSTGDFALEFEEGVAKEDASPKIEAEEEAEPFDFGELDLGIDE CCHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TAPEPEPRDRTQQATVAAVPEQPVTEPAVTTAPLSPLDVPFGEEEAPPLVISSRRKGRSL CCCCCCCCCHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHH LPLVAIVVSVLVIVALAGFGFYFFKEGPAAFNKLGIGFVAEWLGFEAREEGGIGLDKVRG HHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCC GYLANAEAGEVFVIRGEAINNYRKPRASIQVKGALLGSGGQAVVQKIAYCGNSLSDEQIA CEEECCCCCCEEEEECCHHHCCCCCCCEEEEEEEEECCCCHHHHHHHHHHCCCCCHHHHH SLPMAKIESAMNNQFGDSLSNLGVQPGKRIPFVIVLANIPREATDFTVEVTGSTVATQ HCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCEECCC >Mature Secondary Structure AASQEPTQESEPAWAPQQAQAPSFAPADSDAEEAADNLAVSSGIPSGPAATDEDFSFDF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC GGEPTAGSENQAGQSTASEPEVFDFGGFEEESVTEEQSRPAEPEAASAVGGFGDGIAFGE CCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCC VSPEAFAAATDAGGREEGSTGDFALEFEEGVAKEDASPKIEAEEEAEPFDFGELDLGIDE CCHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TAPEPEPRDRTQQATVAAVPEQPVTEPAVTTAPLSPLDVPFGEEEAPPLVISSRRKGRSL CCCCCCCCCHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHH LPLVAIVVSVLVIVALAGFGFYFFKEGPAAFNKLGIGFVAEWLGFEAREEGGIGLDKVRG HHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCC GYLANAEAGEVFVIRGEAINNYRKPRASIQVKGALLGSGGQAVVQKIAYCGNSLSDEQIA CEEECCCCCCEEEEECCHHHCCCCCCCEEEEEEEEECCCCHHHHHHHHHHCCCCCHHHHH SLPMAKIESAMNNQFGDSLSNLGVQPGKRIPFVIVLANIPREATDFTVEVTGSTVATQ HCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA