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The map label for this gene is ywcA [H]

Identifier: 308513317

GI number: 308513317

Start: 2572422

End: 2574176

Strand: Reverse

Name: ywcA [H]

Synonym: NA

Alternate gene names: 308513317

Gene position: 2574176-2572422 (Counterclockwise)

Preceding gene: 39997449

Following gene: 39997445

Centisome position: 67.49

GC content: 63.59

Gene sequence:

>1755_bases
ATGGTCACCATCCCCATCTTCCTGATCATCATCGGTGTTACCATGGCCGTTGTCGTCTGGTCGGCCAAGAGGACCAAGTC
GGCCGCCGACTTCTATACCGCCGGCGGCGGCATCACCGGCACCCAGAACGGCTGGGCCATTGCGGGCGACTACATGTCCG
CGGCCTCCTTCCTGGGGATTTCCGGGATCATCTCCCTCTACGGCTACGACGGGTTCATGTACTCGGTAGGCTGGCTCGTG
GCCTACATCACGGTGCTCCTGATCGTGGCAGAGCCCTGCCGCAACGCGGGCAAGTACACCCTGGGCGACATCCTCTCCTT
CCGCACCGAGCCCAAACCGGTCCGGGCAGTTGCGGCTCTTTCGACCGTGACGGTCTCCACCTTCTACCTGACCGCGCAGA
TGGTCGGCGCCGGCAAGCTGATGCAGTTGCTGATCGGGATTCCCTACAAGTTCGCCATCATCGGCGTCGGTATCCTCATG
GTCGGCTACGTCGTGTTCGGCGGCATGACCGCCACCACCTGGGTCCAGATCATCAAGGCCGGCCTCCTCATGTCCGGCGC
ATTCCTGCTCTCGATCCTAGTCGGCCTCAAGTCGGGCATGAGCCCGTTCCAGTTCTTCACCGACATTGCCACCAGCCCCA
ACATCATCGAGCACGTCCAGAAGGTGGTTCTCAAGGACCCCGTCGCCGTGGCGGGCTTCGATTACGGGCAGCGCTTCCTC
GAGCCAGGCCTCTTCCTGAAGCAGCCCCTCGACCAGATCTCCCTCGGCATGGCCCTGGTGCTCGGCACCGCCGGCATGCC
CCACATCCTGATGCGCTTCTTCACCGTGCCCACGGCCCAGGCCGCCCGCAAATCCGTTATCGTGGCCATGTTCATCATCG
GCTCCTTCTACATCCTGACCACGCTTCTCGGCTTCGGCGCCGCCATCCACGTGACTCCGCAAGCCATTTCCAAGGTCGGT
AAAGGCGGCAACATGGCTGCCATGATGCTGGCCCAGCAACTGGGCGGCGACATCTCCCCGTTCATCGGCGACCTGCTTCT
GGCGTTCCTGTGCGCCGTTGCCTTCGCCACCATCCTGGCCGTGGTGTCGGGTCTGGTTCTGGCCGCTTCCGCCGCCATCG
CCCACGACATCTACGTGAACGTCATCAAGGACGGCCACGCCGACCAGCACGAGCAGGTCATGGCCGCCCGGATCACCTCC
CTCTGCGTCGGCGCCGCCGGCATTGTCATCGGCATCGCGGCCGAGAATCAGAACGTTGCCCACCTGGTGGCCCTGGCCTT
CGCCGTTGCCTCCTCGGGCAACCTGCCGGTCGTCGTCATGTCCCTCTTCTGGCGCAAGTTCAACACCGCCGGCGTCATCT
CGGGTCTGGTGGTCGGCACCGTGGCTGCCATCGCCCTGGTGATGATCTCCCCCAACATGACCTATCCGAAGAAGGTTGCC
GCCGACGCCCAGAAGGTGGTTACGGTTCTGGAGAAGAAGCAGGCCGACGGCGCGGTCCTCACCGAGAAGGAGATGAAGGA
CCTCGACAAGGCCAAGGCCGACTACGAGAAGAACAAGGACGGCAAGTCCATGCTCGGCCTGGACGCACCGCTCTTCCCGC
TCAAGAACCCGGGCATCATCTCGATCCCGCTGGGCTTCCTCGCCGCGATCATCGGTTGCCTGGCCTTCCCGAGCCGGCGT
TCCGAGGAAATGTTCGACGAGATCTACGTCCGCCAGAATACCGGCATCGGCATGGCCAAAGCCGTCGACCACTAG

Upstream 100 bases:
NA

Downstream 100 bases:
NA

Product: sodium/solute symporter family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 584; Mature: 584

Protein sequence:
NA

Sequences:

>Translated_584_residues
MVTIPIFLIIIGVTMAVVVWSAKRTKSAADFYTAGGGITGTQNGWAIAGDYMSAASFLGISGIISLYGYDGFMYSVGWLV
AYITVLLIVAEPCRNAGKYTLGDILSFRTEPKPVRAVAALSTVTVSTFYLTAQMVGAGKLMQLLIGIPYKFAIIGVGILM
VGYVVFGGMTATTWVQIIKAGLLMSGAFLLSILVGLKSGMSPFQFFTDIATSPNIIEHVQKVVLKDPVAVAGFDYGQRFL
EPGLFLKQPLDQISLGMALVLGTAGMPHILMRFFTVPTAQAARKSVIVAMFIIGSFYILTTLLGFGAAIHVTPQAISKVG
KGGNMAAMMLAQQLGGDISPFIGDLLLAFLCAVAFATILAVVSGLVLAASAAIAHDIYVNVIKDGHADQHEQVMAARITS
LCVGAAGIVIGIAAENQNVAHLVALAFAVASSGNLPVVVMSLFWRKFNTAGVISGLVVGTVAAIALVMISPNMTYPKKVA
ADAQKVVTVLEKKQADGAVLTEKEMKDLDKAKADYEKNKDGKSMLGLDAPLFPLKNPGIISIPLGFLAAIIGCLAFPSRR
SEEMFDEIYVRQNTGIGMAKAVDH
>Mature_584_residues
MVTIPIFLIIIGVTMAVVVWSAKRTKSAADFYTAGGGITGTQNGWAIAGDYMSAASFLGISGIISLYGYDGFMYSVGWLV
AYITVLLIVAEPCRNAGKYTLGDILSFRTEPKPVRAVAALSTVTVSTFYLTAQMVGAGKLMQLLIGIPYKFAIIGVGILM
VGYVVFGGMTATTWVQIIKAGLLMSGAFLLSILVGLKSGMSPFQFFTDIATSPNIIEHVQKVVLKDPVAVAGFDYGQRFL
EPGLFLKQPLDQISLGMALVLGTAGMPHILMRFFTVPTAQAARKSVIVAMFIIGSFYILTTLLGFGAAIHVTPQAISKVG
KGGNMAAMMLAQQLGGDISPFIGDLLLAFLCAVAFATILAVVSGLVLAASAAIAHDIYVNVIKDGHADQHEQVMAARITS
LCVGAAGIVIGIAAENQNVAHLVALAFAVASSGNLPVVVMSLFWRKFNTAGVISGLVVGTVAAIALVMISPNMTYPKKVA
ADAQKVVTVLEKKQADGAVLTEKEMKDLDKAKADYEKNKDGKSMLGLDAPLFPLKNPGIISIPLGFLAAIIGCLAFPSRR
SEEMFDEIYVRQNTGIGMAKAVDH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]

Homologues:

Organism=Escherichia coli, GI1790503, Length=594, Percent_Identity=39.7306397306397, Blast_Score=405, Evalue=1e-114,
Organism=Escherichia coli, GI1787251, Length=452, Percent_Identity=23.4513274336283, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI87082237, Length=423, Percent_Identity=23.1678486997636, Blast_Score=70, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001734
- InterPro:   IPR018212
- InterPro:   IPR019900 [H]

Pfam domain/function: PF00474 SSF [H]

EC number: NA

Molecular weight: Translated: 61609; Mature: 61609

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: PS00456 NA_SOLUT_SYMP_1 ; PS50283 NA_SOLUT_SYMP_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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EECHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHCCC
>Mature Secondary Structure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EECHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]