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The map label for this gene is ywcA [H]

Identifier: 308513293

GI number: 308513293

Start: 1155915

End: 1157669

Strand: Reverse

Name: ywcA [H]

Synonym: NA

Alternate gene names: 308513293

Gene position: 1157669-1155915 (Counterclockwise)

Preceding gene: 39996171

Following gene: 39996169

Centisome position: 30.35

GC content: 61.82

Gene sequence:

>1755_bases
ATGGTCACCATCCCCATCTTCTTGGCCATCATCGGTGCCACCATGATGGTTGTCGTCTGGTCCGCCAAGCAGACCAAGTC
GGCCGCCGACTTCTACACCGCCGGCGGCGGCATCACCGGCACCCAGAACGGTTGGGCCATCGCGGGCGACTACATGTCCG
CCGCCTCCTTCCTGGGGATTTCCGGGATCATCTCCCTCTATGGCTATGACGGGTTCATGTACTCGGTGGGTTGGCTCGTG
GCCTACATCACGGTGCTCCTGATCGTGGCCGAACCCTGCCGTAACGCCGGTAAATTCACCCTGGGCGACATCCTCTCCTT
CCGCACCGAACCCAAGTCGGTTCGGGCTGCCGCGGCCATCTCGACCGTCGCTGTCTCCACCTTCTACCTAACCGCGCAGA
TGGTCGGTGCCGGCAAGCTGATGCAGTTGCTGCTCGGCATCCCCTACAAGACCGCTGTCATCGGCGTCGGCATCCTCATG
GTCGGCTACGTCGTGTTCGGCGGCATGACCGCCACCACCTGGGTCCAGATCATCAAGGCCGGCCTTCTCATGTCCGGCGC
TGCGCTGCTCTCCGTCCTGGTAGGCCTCAAGTCGGGAATGAGCCCGTTCCAGTTCTTCAACGACATCGCTACCAGCCCCA
ACATCATCGAGCACGTCCAAAAGGTGGTTCTCAAGGACCCCGTTGCCGTGGCGGGCTTCGATTACGGGCAGCGCTTCCTT
GAGCCGGGCCTCTTCCTGAAGAACCCGCTCGACCAGATCTCTCTCGGCATGGCACTGGTGCTTGGCACCGCCGGCATGCC
TCACATCCTGATGCGCTTCTTCACCGTGCCCACGGCCCAGGCCGCCCGCAAGTCGGTCATCATCGCCATGTTCATCATCG
GCTCCTTCTACATCCTGACCACGCTTCTCGGCTTCGGCGCCGCCATCCACGTGACCCCGCAATCCATCATGAATGTGGAC
AAGGGTGGCAACATGGCTGCCATGATGCTGGCCCAGCAACTGGGCGGCGACATCCACCCCTTCCTGGGTGACCTGCTCCT
GGCGTTCCTGTGCGCCGTTGCCTTCGCCACTATCCTGGCCGTGGTTTCGGGTCTGGTTCTGGCCGCTTCCGCCGCCATTG
CCCACGACATCTACGTAAACGTCATCAAGGGGGGCCACGCCGACCAGCACGAGCAGGTTAAAGCTGCCCGGATCACCTCC
TTCGTGGTCGGTGCCTGCGGCATCGCCATCGGCATCGCGGCCGAGAAGCAGAACGTTGCCCACTTGGTGGCCCTGGCCTT
CGCCGTTGCCGCCTCGGGCAACCTGCCGGTCGTCGTACTCTCCCTCTTCTGGAAGAAGTTCAACACCGCCGGCGTCATCG
CGGGACTGGTGACCGGCACCGTCGTCTCCATCGCGCTGGTGATGGTCTCCCCCAACATGACCTATCCGAAGAAAGTGGCT
GAAGACGCACAGAAAGTGGTGGTCAAGCTGGAGGAGAAACAGGCCGGTGGTGCGGTTCTTACCGAGAAGGAAATGAAGGA
TCTGGGCAAAGCCAAGGCCGACTACGAAAAGAACAAGGACGGCAAATCGTTCCTCGGTCTCGACAAGCCCCTCTTCGCGT
TGAAGAATCCAGGCGTAGTGTCCATCCCGCTGGGCTTCATCGCCGCGGTCATTGCTGCTCTGGCTTTCCCGAGCCGGCGT
TCCGAGGAAATGTTCGACGAACTGTACGTCCGCCAGAACACCGGCATTGGCATCGCCAAAGCGGTGGACCACTAA

Upstream 100 bases:
NA

Downstream 100 bases:
NA

Product: sodium/solute symporter family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 584; Mature: 584

Protein sequence:
NA

Sequences:

>Translated_584_residues
MVTIPIFLAIIGATMMVVVWSAKQTKSAADFYTAGGGITGTQNGWAIAGDYMSAASFLGISGIISLYGYDGFMYSVGWLV
AYITVLLIVAEPCRNAGKFTLGDILSFRTEPKSVRAAAAISTVAVSTFYLTAQMVGAGKLMQLLLGIPYKTAVIGVGILM
VGYVVFGGMTATTWVQIIKAGLLMSGAALLSVLVGLKSGMSPFQFFNDIATSPNIIEHVQKVVLKDPVAVAGFDYGQRFL
EPGLFLKNPLDQISLGMALVLGTAGMPHILMRFFTVPTAQAARKSVIIAMFIIGSFYILTTLLGFGAAIHVTPQSIMNVD
KGGNMAAMMLAQQLGGDIHPFLGDLLLAFLCAVAFATILAVVSGLVLAASAAIAHDIYVNVIKGGHADQHEQVKAARITS
FVVGACGIAIGIAAEKQNVAHLVALAFAVAASGNLPVVVLSLFWKKFNTAGVIAGLVTGTVVSIALVMVSPNMTYPKKVA
EDAQKVVVKLEEKQAGGAVLTEKEMKDLGKAKADYEKNKDGKSFLGLDKPLFALKNPGVVSIPLGFIAAVIAALAFPSRR
SEEMFDELYVRQNTGIGIAKAVDH
>Mature_584_residues
MVTIPIFLAIIGATMMVVVWSAKQTKSAADFYTAGGGITGTQNGWAIAGDYMSAASFLGISGIISLYGYDGFMYSVGWLV
AYITVLLIVAEPCRNAGKFTLGDILSFRTEPKSVRAAAAISTVAVSTFYLTAQMVGAGKLMQLLLGIPYKTAVIGVGILM
VGYVVFGGMTATTWVQIIKAGLLMSGAALLSVLVGLKSGMSPFQFFNDIATSPNIIEHVQKVVLKDPVAVAGFDYGQRFL
EPGLFLKNPLDQISLGMALVLGTAGMPHILMRFFTVPTAQAARKSVIIAMFIIGSFYILTTLLGFGAAIHVTPQSIMNVD
KGGNMAAMMLAQQLGGDIHPFLGDLLLAFLCAVAFATILAVVSGLVLAASAAIAHDIYVNVIKGGHADQHEQVKAARITS
FVVGACGIAIGIAAEKQNVAHLVALAFAVAASGNLPVVVLSLFWKKFNTAGVIAGLVTGTVVSIALVMVSPNMTYPKKVA
EDAQKVVVKLEEKQAGGAVLTEKEMKDLGKAKADYEKNKDGKSFLGLDKPLFALKNPGVVSIPLGFIAAVIAALAFPSRR
SEEMFDELYVRQNTGIGIAKAVDH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]

Homologues:

Organism=Escherichia coli, GI1790503, Length=589, Percent_Identity=39.2190152801358, Blast_Score=388, Evalue=1e-109,
Organism=Escherichia coli, GI1787251, Length=452, Percent_Identity=23.8938053097345, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI87082237, Length=426, Percent_Identity=22.7699530516432, Blast_Score=69, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001734
- InterPro:   IPR018212
- InterPro:   IPR019900 [H]

Pfam domain/function: PF00474 SSF [H]

EC number: NA

Molecular weight: Translated: 61383; Mature: 61383

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: PS00456 NA_SOLUT_SYMP_1 ; PS50283 NA_SOLUT_SYMP_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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EECHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHCCCC
>Mature Secondary Structure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EECHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]