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The map label for this gene is yhjB [C]

Identifier: 57235106

GI number: 57235106

Start: 807588

End: 808082

Strand: Direct

Name: yhjB [C]

Synonym: DET0880

Alternate gene names: 57235106

Gene position: 807588-808082 (Clockwise)

Preceding gene: 57235092

Following gene: 57234336

Centisome position: 54.95

GC content: 35.56

Gene sequence:

>495_bases
ATGGATACAAGTCTATATAAGACAATACTGAAAATCGTTATTCACCCTAGCTACGAGTGGTTAGAGCCAGCTAAGGGTAT
GAATATTTCTCATCGTGAACTTGAGGTCTTTGTATTAATGATTGAAGGCCATAATAACAAAGAAATAGGTGCACTTCTGG
GCATACAGTACCAATCGGTAAAAAACCATTTGCATACACTAAATAAAAAATTAAAGGCAAATAATAATCCACAAGCAATG
GTTATATTATTGTCTATGAATGTACTTGGTCTACTGAGAAAATGGGAAAACACTGAAATTACACAATCAGAATATGTACA
AAATTTAAGAGAAACATTGGAAAATCCAAATTCTGGACTAAGCAAAAGTTCAAAAACCTTCACAAAGAAGTTCATGGTCG
AACATGGCCTTTACGGTGAATTGTATAAAGATAGAATCGAGGAATTGAGAAATGCGGAAAGACCCGAAGGGCAACCCGAA
AAGACTGGCGAGTGA

Upstream 100 bases:

>100_bases
CATTATTACATATTTGTTTATTCATTAGAAGACTTTTATCCTTGACAAAATATTTCTATAAGAGTACTCTGGTACTAATG
TTAGTGAATAGAGGTTAACG

Downstream 100 bases:

>100_bases
TGGTGGCGCTTTGACTGCAATCACTGGCGCATACATAGCGGTGCGATGCCATCGCGAGACAGGCGCACATGGCTCTGCCA
TGTGCAAGCAGGACGCAGGA

Product: LuxR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MDTSLYKTILKIVIHPSYEWLEPAKGMNISHRELEVFVLMIEGHNNKEIGALLGIQYQSVKNHLHTLNKKLKANNNPQAM
VILLSMNVLGLLRKWENTEITQSEYVQNLRETLENPNSGLSKSSKTFTKKFMVEHGLYGELYKDRIEELRNAERPEGQPE
KTGE

Sequences:

>Translated_164_residues
MDTSLYKTILKIVIHPSYEWLEPAKGMNISHRELEVFVLMIEGHNNKEIGALLGIQYQSVKNHLHTLNKKLKANNNPQAM
VILLSMNVLGLLRKWENTEITQSEYVQNLRETLENPNSGLSKSSKTFTKKFMVEHGLYGELYKDRIEELRNAERPEGQPE
KTGE
>Mature_164_residues
MDTSLYKTILKIVIHPSYEWLEPAKGMNISHRELEVFVLMIEGHNNKEIGALLGIQYQSVKNHLHTLNKKLKANNNPQAM
VILLSMNVLGLLRKWENTEITQSEYVQNLRETLENPNSGLSKSSKTFTKKFMVEHGLYGELYKDRIEELRNAERPEGQPE
KTGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18921; Mature: 18921

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTSLYKTILKIVIHPSYEWLEPAKGMNISHRELEVFVLMIEGHNNKEIGALLGIQYQSV
CCHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHH
KNHLHTLNKKLKANNNPQAMVILLSMNVLGLLRKWENTEITQSEYVQNLRETLENPNSGL
HHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCC
SKSSKTFTKKFMVEHGLYGELYKDRIEELRNAERPEGQPEKTGE
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MDTSLYKTILKIVIHPSYEWLEPAKGMNISHRELEVFVLMIEGHNNKEIGALLGIQYQSV
CCHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHH
KNHLHTLNKKLKANNNPQAMVILLSMNVLGLLRKWENTEITQSEYVQNLRETLENPNSGL
HHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCC
SKSSKTFTKKFMVEHGLYGELYKDRIEELRNAERPEGQPEKTGE
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA