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The map label for this gene is ytfP [H]

Identifier: 57235041

GI number: 57235041

Start: 189504

End: 190811

Strand: Direct

Name: ytfP [H]

Synonym: DET0195

Alternate gene names: 57235041

Gene position: 189504-190811 (Clockwise)

Preceding gene: 57235053

Following gene: 57235039

Centisome position: 12.89

GC content: 55.96

Gene sequence:

>1308_bases
ATGACAGTTAAAGAGATTGTGGTAATAGGTGCGGGGGCGGGAGGGCTTATGGCGGCAGGCCGGGCGGCTGAGTGCGGCGG
TAAAGTAATCCTGCTGGAAAAGACCGAACAGCCGGGCAAGAAAATGCTTATTTCGGGGCAGGGCAGGTGCAATATTTCCA
ACAGCCGGGATATTGCCGAATTTATCACCGCTTTCGGCCCTAACGGGCGGTTTTTATACAGCGCCTTCAGCCGTTTTTTC
CGGCAGGAGCTGGTGGATTTGCTGGCACGTTACGGGGTGGAAACCAAAACCGAACGTGGCGGGCGGCTTTTCCCTGTTTC
GGACAAAGCTCATGACGTGGTGGCGGCCTTAACTGAATATGCCTCCGGCGCGGCCTTGGTAAGCGGGCAGAAGGTCAGCC
AGATACTGGTAAGTGAGGGGCGGGTAGTGGGGGTCAAAACCGAAAAGGAGACCTTCAGGGCGGATGCGGCGGTGATTGCC
ACCGGGGGTGCGTCCTATCCCGGTACCGGCTCTTCGGGAGACGGTTTCCGTTTGGCGGAAGCGCTGGGGCATACTATTGT
GAAACTCCGTCCGGCTCTGGTGCCTCTGGTGGTGAAAGAGATAGATTTGGCAAAGAGCATGCAGGGGGTGGCCCTGAAAA
ATATCCGCCTGACGGCCTACCGCTGTGAAGCGGATAAAATACCTGCGGATTTGACCCTGCAGGACTGGGGGCGGGGTATT
GCGGGCAAAAAACCGCCCAAAGCGGTGATTGAAAGCCGCATGGGTGAGCTTATGATTACCCACTTCGGGCTGGGCGGGCC
TTTGACCATGCTGATGGGTCTGCCGGTTGCCGAGGCACTGGAGCAAGGGGCGGTGAGTGTGGCCATAGATTTAAAACCGG
CACTTTCGCTGGATAAACTGCGTCTTCGCCTCCAGCGGGACTTTGATACTTTCGGCAAACGCAGTTTTCAAAACCTGCTC
TCAGAGCTTTTGCCCCAGAAGATGATAAGGCCGTTTGTAGACCTGACCGGCATAGACCCGTTCAAATGCGGCGGCCAGAT
AACGGCGGCTGAACGAGAAGTTATCTTGGCAAACCTGAAATGCCTGCGGTTCAATATTACTTCCACTTTGCCTTTAAGTG
CGGCGGTGGTGACTGCCGGCGGGGTAGACCTGAAGGAGATAAACCCGCGGACTATGGAGTCTAAACTGGTAAAAGGGCTT
TATTTCTGCGGGGAGGTTATGGATATAGATGCGGATACCGGCGGTTATAACCTTCAGGCGGCTTTTTCCACCGGCTATCT
GGCAGGTGAATCAGCGGCGGGGGCTTAG

Upstream 100 bases:

>100_bases
CTATTTCTATATTGGGCAGGAATTGGGTAAAATGAAGCAGACCTGAAAATGTGCTATATATAAATAGAAAGGCTGGCCGT
AAGTGGCCGGTGGTTTTTTA

Downstream 100 bases:

>100_bases
CGGGAATGGCCGGGCGGGGTAATAGCCTGCTCTTTGTTTTACCCCTTCTTTGGCTGTCTGCCGGATATAGAACATCCGCT
TGAGATAAATACGTACAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 435; Mature: 434

Protein sequence:

>435_residues
MTVKEIVVIGAGAGGLMAAGRAAECGGKVILLEKTEQPGKKMLISGQGRCNISNSRDIAEFITAFGPNGRFLYSAFSRFF
RQELVDLLARYGVETKTERGGRLFPVSDKAHDVVAALTEYASGAALVSGQKVSQILVSEGRVVGVKTEKETFRADAAVIA
TGGASYPGTGSSGDGFRLAEALGHTIVKLRPALVPLVVKEIDLAKSMQGVALKNIRLTAYRCEADKIPADLTLQDWGRGI
AGKKPPKAVIESRMGELMITHFGLGGPLTMLMGLPVAEALEQGAVSVAIDLKPALSLDKLRLRLQRDFDTFGKRSFQNLL
SELLPQKMIRPFVDLTGIDPFKCGGQITAAEREVILANLKCLRFNITSTLPLSAAVVTAGGVDLKEINPRTMESKLVKGL
YFCGEVMDIDADTGGYNLQAAFSTGYLAGESAAGA

Sequences:

>Translated_435_residues
MTVKEIVVIGAGAGGLMAAGRAAECGGKVILLEKTEQPGKKMLISGQGRCNISNSRDIAEFITAFGPNGRFLYSAFSRFF
RQELVDLLARYGVETKTERGGRLFPVSDKAHDVVAALTEYASGAALVSGQKVSQILVSEGRVVGVKTEKETFRADAAVIA
TGGASYPGTGSSGDGFRLAEALGHTIVKLRPALVPLVVKEIDLAKSMQGVALKNIRLTAYRCEADKIPADLTLQDWGRGI
AGKKPPKAVIESRMGELMITHFGLGGPLTMLMGLPVAEALEQGAVSVAIDLKPALSLDKLRLRLQRDFDTFGKRSFQNLL
SELLPQKMIRPFVDLTGIDPFKCGGQITAAEREVILANLKCLRFNITSTLPLSAAVVTAGGVDLKEINPRTMESKLVKGL
YFCGEVMDIDADTGGYNLQAAFSTGYLAGESAAGA
>Mature_434_residues
TVKEIVVIGAGAGGLMAAGRAAECGGKVILLEKTEQPGKKMLISGQGRCNISNSRDIAEFITAFGPNGRFLYSAFSRFFR
QELVDLLARYGVETKTERGGRLFPVSDKAHDVVAALTEYASGAALVSGQKVSQILVSEGRVVGVKTEKETFRADAAVIAT
GGASYPGTGSSGDGFRLAEALGHTIVKLRPALVPLVVKEIDLAKSMQGVALKNIRLTAYRCEADKIPADLTLQDWGRGIA
GKKPPKAVIESRMGELMITHFGLGGPLTMLMGLPVAEALEQGAVSVAIDLKPALSLDKLRLRLQRDFDTFGKRSFQNLLS
ELLPQKMIRPFVDLTGIDPFKCGGQITAAEREVILANLKCLRFNITSTLPLSAAVVTAGGVDLKEINPRTMESKLVKGLY
FCGEVMDIDADTGGYNLQAAFSTGYLAGESAAGA

Specific function: Unknown

COG id: COG2081

COG function: function code R; Predicted flavoproteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI2367234, Length=424, Percent_Identity=28.5377358490566, Blast_Score=154, Evalue=1e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004792
- InterPro:   IPR013027 [H]

Pfam domain/function: PF03486 HI0933_like [H]

EC number: NA

Molecular weight: Translated: 46228; Mature: 46097

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: PS00178 AA_TRNA_LIGASE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVKEIVVIGAGAGGLMAAGRAAECGGKVILLEKTEQPGKKMLISGQGRCNISNSRDIAE
CCCEEEEEEECCCCCHHHCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCCCHHHH
FITAFGPNGRFLYSAFSRFFRQELVDLLARYGVETKTERGGRLFPVSDKAHDVVAALTEY
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHHHHHHHH
ASGAALVSGQKVSQILVSEGRVVGVKTEKETFRADAAVIATGGASYPGTGSSGDGFRLAE
CCCCEEECCHHHHHHHHCCCCEEEEECCHHHHHCCEEEEEECCCCCCCCCCCCCCHHHHH
ALGHTIVKLRPALVPLVVKEIDLAKSMQGVALKNIRLTAYRCEADKIPADLTLQDWGRGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCCCCCCCCHHHHCCCC
AGKKPPKAVIESRMGELMITHFGLGGPLTMLMGLPVAEALEQGAVSVAIDLKPALSLDKL
CCCCCHHHHHHHHHCCEEEEEECCCCHHHHHHCCCHHHHHHCCCEEEEEECCCCCCHHHH
RLRLQRDFDTFGKRSFQNLLSELLPQKMIRPFVDLTGIDPFKCGGQITAAEREVILANLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHEEEECCE
CLRFNITSTLPLSAAVVTAGGVDLKEINPRTMESKLVKGLYFCGEVMDIDADTGGYNLQA
EEEEECCCCCCCCEEEEEECCCCHHHCCCHHHHHHHHHHHHHHCCEEEECCCCCCEEEEE
AFSTGYLAGESAAGA
EECCCEECCCCCCCC
>Mature Secondary Structure 
TVKEIVVIGAGAGGLMAAGRAAECGGKVILLEKTEQPGKKMLISGQGRCNISNSRDIAE
CCEEEEEEECCCCCHHHCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCCCHHHH
FITAFGPNGRFLYSAFSRFFRQELVDLLARYGVETKTERGGRLFPVSDKAHDVVAALTEY
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHHHHHHHH
ASGAALVSGQKVSQILVSEGRVVGVKTEKETFRADAAVIATGGASYPGTGSSGDGFRLAE
CCCCEEECCHHHHHHHHCCCCEEEEECCHHHHHCCEEEEEECCCCCCCCCCCCCCHHHHH
ALGHTIVKLRPALVPLVVKEIDLAKSMQGVALKNIRLTAYRCEADKIPADLTLQDWGRGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCCCCCCCCHHHHCCCC
AGKKPPKAVIESRMGELMITHFGLGGPLTMLMGLPVAEALEQGAVSVAIDLKPALSLDKL
CCCCCHHHHHHHHHCCEEEEEECCCCHHHHHHCCCHHHHHHCCCEEEEEECCCCCCHHHH
RLRLQRDFDTFGKRSFQNLLSELLPQKMIRPFVDLTGIDPFKCGGQITAAEREVILANLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHEEEECCE
CLRFNITSTLPLSAAVVTAGGVDLKEINPRTMESKLVKGLYFCGEVMDIDADTGGYNLQA
EEEEECCCCCCCCEEEEEECCCCHHHCCCHHHHHHHHHHHHHHCCEEEECCCCCCEEEEE
AFSTGYLAGESAAGA
EECCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]