| Definition | Dehalococcoides ethenogenes 195, complete genome. |
|---|---|
| Accession | NC_002936 |
| Length | 1,469,720 |
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The map label for this gene is resE [H]
Identifier: 57235028
GI number: 57235028
Start: 133577
End: 135322
Strand: Direct
Name: resE [H]
Synonym: DET0136
Alternate gene names: 57235028
Gene position: 133577-135322 (Clockwise)
Preceding gene: 57235029
Following gene: 57235021
Centisome position: 9.09
GC content: 53.09
Gene sequence:
>1746_bases ATGGCCAGAAGCCTTAAATGGCGTTTAATAAGCCTGTTTTGCCTGCTTATTGCCGCTAGCGTGGGTCTGCTCAGCATTTT CCTGTCCAATCATCTGGAGAACTCTTATCTGGACAATTTGCAGTCCCGCCTTGTTCAGGAAGCCACGCTGCTTTCAGAGA TAGTGCCGGAGCATATTTCTGAAGACCCGGACAGTTTTGATGCTTATATTAAGGAACTGGGAGCCTCGCTGGATATACGG CTGACTGTTATAGACCCCGGCGGTCAGGTGCTGGCAGATTCACTCCAGTCACCCTCGGACATGGAGAATCACTCTACCAG AGTTGAGTTTATTGATGCTTTAAAAAACGGCCTTGGCACCAGTGTTCATCAGTCTGCCAGTCTGGGATATGAAATGCTGT ACGTGGCTATCCCGGTTAAAAGCGGGACAGAGGTACTGGCGGTAGTGCGGGTGGCCTTGCCGGTAGAAGAAGTATACGCG GCGGTGGGGGATGTAGACCGGACTATTTTGCTGAGTGCCTTAATAAGCATACTGGCGGCCGGGCTTTTAGCAGTTTGGGT AGCGGCCAGCCTGACCCGCCCGATTAAGGAACTCACCGCTATTGCCCGGCGTATTGCCCGGGGGCAGATGGATGCCGTTC AGATAGAGGTAAGCGGCAAAGGTGAAATGGAAGAACTGGCCCATGCCTTCCGCCTGATGACGGAACGCCTGCGTGACAGC ATAAATGCAGTCAGCTCCGAGCGTGACCGCCTGTCAGCGGTACTGGAACGCATGGGTGACGGCATTTTCCTGCTGGACTG CGAAGGCACTATAAGCCTTTTAAACCCGGCTGCCGAGCGGATATTTAAACTGGAAGCCGAACATGTAATAGGCCACAGCT TTGTGGAAGCAATACGTGACCATGAAATCCACTCTATTTTTGAGCATTCCAAATCCTCCGGCAAGCAGGAGATGGGTTTT GTAGAGCTTGCCTCCGGCAGGCGTTTTCTGGGTATTATTGCTACCCCGCTGGTCAGCCAGTCCGGTTATCTGGTGCTGGT GCAGGACCTTTCAGAGCTTCGGCGGCTGGAGAAGGTAAGGCGGGATTTTGTAGCCAATATTTCCCACGAATTACGCACCC CTATCAGTTCCCTGAAACTGCTGACTGAAACCTTGCAGGAGGGGGCGGCATCTGATGCTGCGGTTGCGGCCGGGTTTATT GAAAAAATCCACCTTGAGGTAGATAAACTGGCCCAGCTGGTTACCGAACTGAGTGACCTTTCCGCTATAGAAAGCGGCCA GGCGGTTTTAAACCTCCAGCCGGGAGATATTTCCACAGCTATAAAACTGGCAGCCGCCAGGCTTAGCCCCCAGGCGGAAC GGGCAGGTATAAGCCTTGGGGTAGAACTGCCCGAAACCCTGCCGCAGGTAAAGCTGGACGAAAACCGGATTGAACAAGTG CTGGTAAATCTGGTGCATAATGCCATCAAGTTTACCCCCAAGGGCGGCCGGATAAAGATTGGTGCCCGCACCCAGGGGCA GATACTGGTAGTATATGTATCTGACAGCGGCATAGGTATACCCGAAGATGATTTGACCAGAGTATTTGAGCGTTTTTACA AAGTGGATAAAGCCCGTTCCGGCGGCGGTACAGGTTTGGGACTGGCTATTTCCAAGCATATAGTGCAGGCACACGGCGGG AACATCTGGGCAGAAAGCCGCTACGGCAAGGGGGCAACCTTCAGTTTCAGCCTGCCGCTTGGCTGA
Upstream 100 bases:
>100_bases TACATATCAGCTGGCTGCGCCAGAAAATAGAGACTGACCCGTCCCGTCCCCGCCACCTGATAACAGTGCGGGGAACCGGC TATAAGTTTGAGGAGTAAAT
Downstream 100 bases:
>100_bases GTATTTTCTTACACCCGTTAGTTTATAAACCAGCTCTATCAGGGCTGGTTTTTTTATTATTCCGGTATTTCAAGATTTTT ACATAACCTTAACAAATCCT
Product: sensory box sensor histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 581; Mature: 580
Protein sequence:
>581_residues MARSLKWRLISLFCLLIAASVGLLSIFLSNHLENSYLDNLQSRLVQEATLLSEIVPEHISEDPDSFDAYIKELGASLDIR LTVIDPGGQVLADSLQSPSDMENHSTRVEFIDALKNGLGTSVHQSASLGYEMLYVAIPVKSGTEVLAVVRVALPVEEVYA AVGDVDRTILLSALISILAAGLLAVWVAASLTRPIKELTAIARRIARGQMDAVQIEVSGKGEMEELAHAFRLMTERLRDS INAVSSERDRLSAVLERMGDGIFLLDCEGTISLLNPAAERIFKLEAEHVIGHSFVEAIRDHEIHSIFEHSKSSGKQEMGF VELASGRRFLGIIATPLVSQSGYLVLVQDLSELRRLEKVRRDFVANISHELRTPISSLKLLTETLQEGAASDAAVAAGFI EKIHLEVDKLAQLVTELSDLSAIESGQAVLNLQPGDISTAIKLAAARLSPQAERAGISLGVELPETLPQVKLDENRIEQV LVNLVHNAIKFTPKGGRIKIGARTQGQILVVYVSDSGIGIPEDDLTRVFERFYKVDKARSGGGTGLGLAISKHIVQAHGG NIWAESRYGKGATFSFSLPLG
Sequences:
>Translated_581_residues MARSLKWRLISLFCLLIAASVGLLSIFLSNHLENSYLDNLQSRLVQEATLLSEIVPEHISEDPDSFDAYIKELGASLDIR LTVIDPGGQVLADSLQSPSDMENHSTRVEFIDALKNGLGTSVHQSASLGYEMLYVAIPVKSGTEVLAVVRVALPVEEVYA AVGDVDRTILLSALISILAAGLLAVWVAASLTRPIKELTAIARRIARGQMDAVQIEVSGKGEMEELAHAFRLMTERLRDS INAVSSERDRLSAVLERMGDGIFLLDCEGTISLLNPAAERIFKLEAEHVIGHSFVEAIRDHEIHSIFEHSKSSGKQEMGF VELASGRRFLGIIATPLVSQSGYLVLVQDLSELRRLEKVRRDFVANISHELRTPISSLKLLTETLQEGAASDAAVAAGFI EKIHLEVDKLAQLVTELSDLSAIESGQAVLNLQPGDISTAIKLAAARLSPQAERAGISLGVELPETLPQVKLDENRIEQV LVNLVHNAIKFTPKGGRIKIGARTQGQILVVYVSDSGIGIPEDDLTRVFERFYKVDKARSGGGTGLGLAISKHIVQAHGG NIWAESRYGKGATFSFSLPLG >Mature_580_residues ARSLKWRLISLFCLLIAASVGLLSIFLSNHLENSYLDNLQSRLVQEATLLSEIVPEHISEDPDSFDAYIKELGASLDIRL TVIDPGGQVLADSLQSPSDMENHSTRVEFIDALKNGLGTSVHQSASLGYEMLYVAIPVKSGTEVLAVVRVALPVEEVYAA VGDVDRTILLSALISILAAGLLAVWVAASLTRPIKELTAIARRIARGQMDAVQIEVSGKGEMEELAHAFRLMTERLRDSI NAVSSERDRLSAVLERMGDGIFLLDCEGTISLLNPAAERIFKLEAEHVIGHSFVEAIRDHEIHSIFEHSKSSGKQEMGFV ELASGRRFLGIIATPLVSQSGYLVLVQDLSELRRLEKVRRDFVANISHELRTPISSLKLLTETLQEGAASDAAVAAGFIE KIHLEVDKLAQLVTELSDLSAIESGQAVLNLQPGDISTAIKLAAARLSPQAERAGISLGVELPETLPQVKLDENRIEQVL VNLVHNAIKFTPKGGRIKIGARTQGQILVVYVSDSGIGIPEDDLTRVFERFYKVDKARSGGGTGLGLAISKHIVQAHGGN IWAESRYGKGATFSFSLPLG
Specific function: Member of the two-component regulatory system resD/resE involved in the global regulation of aerobic and anaerobic respiration. Probably phosphorylates resD [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI1786600, Length=375, Percent_Identity=29.8666666666667, Blast_Score=139, Evalue=4e-34, Organism=Escherichia coli, GI48994928, Length=292, Percent_Identity=30.4794520547945, Blast_Score=132, Evalue=6e-32, Organism=Escherichia coli, GI1788393, Length=241, Percent_Identity=32.7800829875519, Blast_Score=130, Evalue=3e-31, Organism=Escherichia coli, GI1790436, Length=237, Percent_Identity=35.8649789029536, Blast_Score=115, Evalue=5e-27, Organism=Escherichia coli, GI1789149, Length=242, Percent_Identity=32.6446280991736, Blast_Score=114, Evalue=2e-26, Organism=Escherichia coli, GI1786912, Length=225, Percent_Identity=33.7777777777778, Blast_Score=110, Evalue=3e-25, Organism=Escherichia coli, GI145693157, Length=228, Percent_Identity=34.2105263157895, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1788713, Length=268, Percent_Identity=30.5970149253731, Blast_Score=103, Evalue=3e-23, Organism=Escherichia coli, GI1788549, Length=382, Percent_Identity=23.0366492146597, Blast_Score=102, Evalue=6e-23, Organism=Escherichia coli, GI87081816, Length=239, Percent_Identity=31.3807531380753, Blast_Score=99, Evalue=6e-22, Organism=Escherichia coli, GI1786783, Length=232, Percent_Identity=29.7413793103448, Blast_Score=97, Evalue=4e-21, Organism=Escherichia coli, GI1790346, Length=237, Percent_Identity=29.1139240506329, Blast_Score=93, Evalue=4e-20, Organism=Escherichia coli, GI1790861, Length=200, Percent_Identity=30.5, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI1790300, Length=366, Percent_Identity=25.4098360655738, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI1787894, Length=226, Percent_Identity=27.8761061946903, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI1788279, Length=239, Percent_Identity=26.7782426778243, Blast_Score=75, Evalue=2e-14, Organism=Escherichia coli, GI1789808, Length=208, Percent_Identity=27.8846153846154, Blast_Score=73, Evalue=6e-14, Organism=Escherichia coli, GI1789403, Length=202, Percent_Identity=25.7425742574257, Blast_Score=70, Evalue=5e-13, Organism=Escherichia coli, GI87082128, Length=241, Percent_Identity=25.7261410788382, Blast_Score=69, Evalue=7e-13, Organism=Escherichia coli, GI1790551, Length=223, Percent_Identity=27.3542600896861, Blast_Score=69, Evalue=1e-12, Organism=Escherichia coli, GI1787374, Length=223, Percent_Identity=23.3183856502242, Blast_Score=62, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 63007; Mature: 62876
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: PS50885 HAMP ; PS50112 PAS ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARSLKWRLISLFCLLIAASVGLLSIFLSNHLENSYLDNLQSRLVQEATLLSEIVPEHIS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHC EDPDSFDAYIKELGASLDIRLTVIDPGGQVLADSLQSPSDMENHSTRVEFIDALKNGLGT CCCHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCC SVHQSASLGYEMLYVAIPVKSGTEVLAVVRVALPVEEVYAAVGDVDRTILLSALISILAA CHHHHHHCCEEEEEEEEECCCCHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHH GLLAVWVAASLTRPIKELTAIARRIARGQMDAVQIEVSGKGEMEELAHAFRLMTERLRDS HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH INAVSSERDRLSAVLERMGDGIFLLDCEGTISLLNPAAERIFKLEAEHVIGHSFVEAIRD HHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HEIHSIFEHSKSSGKQEMGFVELASGRRFLGIIATPLVSQSGYLVLVQDLSELRRLEKVR HHHHHHHHHHHCCCCHHCCCEEECCCCEEEHHHHHHHHCCCCCEEEHHHHHHHHHHHHHH RDFVANISHELRTPISSLKLLTETLQEGAASDAAVAAGFIEKIHLEVDKLAQLVTELSDL HHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAIESGQAVLNLQPGDISTAIKLAAARLSPQAERAGISLGVELPETLPQVKLDENRIEQV HHHCCCCEEEEECCCCHHHHHHHHHHHCCCHHHHCCCEECCCCHHHCCCCCCCHHHHHHH LVNLVHNAIKFTPKGGRIKIGARTQGQILVVYVSDSGIGIPEDDLTRVFERFYKVDKARS HHHHHHHHHEECCCCCEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCC GGGTGLGLAISKHIVQAHGGNIWAESRYGKGATFSFSLPLG CCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCEEEEECCCC >Mature Secondary Structure ARSLKWRLISLFCLLIAASVGLLSIFLSNHLENSYLDNLQSRLVQEATLLSEIVPEHIS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHC EDPDSFDAYIKELGASLDIRLTVIDPGGQVLADSLQSPSDMENHSTRVEFIDALKNGLGT CCCHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCC SVHQSASLGYEMLYVAIPVKSGTEVLAVVRVALPVEEVYAAVGDVDRTILLSALISILAA CHHHHHHCCEEEEEEEEECCCCHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHH GLLAVWVAASLTRPIKELTAIARRIARGQMDAVQIEVSGKGEMEELAHAFRLMTERLRDS HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH INAVSSERDRLSAVLERMGDGIFLLDCEGTISLLNPAAERIFKLEAEHVIGHSFVEAIRD HHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HEIHSIFEHSKSSGKQEMGFVELASGRRFLGIIATPLVSQSGYLVLVQDLSELRRLEKVR HHHHHHHHHHHCCCCHHCCCEEECCCCEEEHHHHHHHHCCCCCEEEHHHHHHHHHHHHHH RDFVANISHELRTPISSLKLLTETLQEGAASDAAVAAGFIEKIHLEVDKLAQLVTELSDL HHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAIESGQAVLNLQPGDISTAIKLAAARLSPQAERAGISLGVELPETLPQVKLDENRIEQV HHHCCCCEEEEECCCCHHHHHHHHHHHCCCHHHHCCCEECCCCHHHCCCCCCCHHHHHHH LVNLVHNAIKFTPKGGRIKIGARTQGQILVVYVSDSGIGIPEDDLTRVFERFYKVDKARS HHHHHHHHHEECCCCCEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCC GGGTGLGLAISKHIVQAHGGNIWAESRYGKGATFSFSLPLG CCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7934829; 9384377; 8631715 [H]