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The map label for this gene is yibD [C]

Identifier: 57235012

GI number: 57235012

Start: 200051

End: 200962

Strand: Direct

Name: yibD [C]

Synonym: DET0208

Alternate gene names: 57235012

Gene position: 200051-200962 (Clockwise)

Preceding gene: 57235013

Following gene: 57235011

Centisome position: 13.61

GC content: 51.75

Gene sequence:

>912_bases
ATGAGCCTTTCGGTAGTAATTTGTACCCGAAACAGTGCTTCTACTATAAAAGACTGTCTGGATTCGCTTATGCCTGCTTA
CCGCAGCAGTCTTATCCGGGAAATTATCATAGTGGACGCCCAAAGCACGGATGCAACCTGCCATATAGCCGGGGATTATC
CGGTAAGGATATATTTTGAACCCGGCAAAGGGGTTTATTTCGGTTACCAGTATGCCCTGGGCATAGCTTCCGGGGAATAC
GTGCTTTTTCTGGACAGTGATGCCTATCTGGATAATACCAGCCTGACCAGCGTTCTTAATACATTTACCGACCCGGAAAT
AGGCTTGGTGGGTGTATATTCCTTCAGCCCGGACAAAAGCCGCCTGGGCAGGTGTGCCGGGCAGTGGTGGGACTACCACC
GCATGCGTCTTTTAGCCCATTCCAGCTCTTCACTATTCGGGCGCTTGTATCACCGGGTAGTGGGTTTTGGGGCGGTCTAT
ACCAGCGGCCCGTGTTTTATAGCCAGCCGCCAGTGTCTGGAAGCAACCGGCGGTTTTGCTCCCGAATTATACCTGTATTA
TCTGCACCCGAAACTGGCCTATCCCGGTGATATTATGCTTTCAAAACGGGCTGTTAATGCCGGGTACAAGGCGGTTTGGG
CAAACTGCGGGCGGGTTGGGCATTACCCTCCGGCAAACGCCTTGGAATTATGGCGTCAGCGGGTCAATTGGGGGCGGGGT
GATGCGGCTTATCTAAAGATATGCCGTACTGGTTTTACTAAAAGGGCTACGTGCGTGCTGTCACGTCTGGGTTCTCCCTT
TATGGCTTTGTATCTGGCTTTCAGGTACTGCAACCCGGTTCATTTGTGGTATTTGCCGCTGGCTCAGCTGGCCTGGCTGG
GCGGCTATTTTAATTTCAGGCTGAAAAGATGA

Upstream 100 bases:

>100_bases
AAGATGTGCACCTGAGCCTTGGGCATATCTTTTCCTGTATGGTAAAGGCCCGCATAGAAAAAGAAACTGTCTAGTTCGGG
GATTAGCCTTGGAAAATATA

Downstream 100 bases:

>100_bases
AAAACGAAGCCCTTTTGCTTTCGTTTTCAAAGCTGTTTGGCATTTTGGCGCTGGTTTTGTGGGGTTTTAGCCTGGCGGGA
AGCACTTTCAGCCCTGACAC

Product: glycosyl transferase, group 2 family protein

Products: NA

Alternate protein names: Glycosyl Transferase Family Protein; Glycosyl Transferase Group 2 Family Protein

Number of amino acids: Translated: 303; Mature: 302

Protein sequence:

>303_residues
MSLSVVICTRNSASTIKDCLDSLMPAYRSSLIREIIIVDAQSTDATCHIAGDYPVRIYFEPGKGVYFGYQYALGIASGEY
VLFLDSDAYLDNTSLTSVLNTFTDPEIGLVGVYSFSPDKSRLGRCAGQWWDYHRMRLLAHSSSSLFGRLYHRVVGFGAVY
TSGPCFIASRQCLEATGGFAPELYLYYLHPKLAYPGDIMLSKRAVNAGYKAVWANCGRVGHYPPANALELWRQRVNWGRG
DAAYLKICRTGFTKRATCVLSRLGSPFMALYLAFRYCNPVHLWYLPLAQLAWLGGYFNFRLKR

Sequences:

>Translated_303_residues
MSLSVVICTRNSASTIKDCLDSLMPAYRSSLIREIIIVDAQSTDATCHIAGDYPVRIYFEPGKGVYFGYQYALGIASGEY
VLFLDSDAYLDNTSLTSVLNTFTDPEIGLVGVYSFSPDKSRLGRCAGQWWDYHRMRLLAHSSSSLFGRLYHRVVGFGAVY
TSGPCFIASRQCLEATGGFAPELYLYYLHPKLAYPGDIMLSKRAVNAGYKAVWANCGRVGHYPPANALELWRQRVNWGRG
DAAYLKICRTGFTKRATCVLSRLGSPFMALYLAFRYCNPVHLWYLPLAQLAWLGGYFNFRLKR
>Mature_302_residues
SLSVVICTRNSASTIKDCLDSLMPAYRSSLIREIIIVDAQSTDATCHIAGDYPVRIYFEPGKGVYFGYQYALGIASGEYV
LFLDSDAYLDNTSLTSVLNTFTDPEIGLVGVYSFSPDKSRLGRCAGQWWDYHRMRLLAHSSSSLFGRLYHRVVGFGAVYT
SGPCFIASRQCLEATGGFAPELYLYYLHPKLAYPGDIMLSKRAVNAGYKAVWANCGRVGHYPPANALELWRQRVNWGRGD
AAYLKICRTGFTKRATCVLSRLGSPFMALYLAFRYCNPVHLWYLPLAQLAWLGGYFNFRLKR

Specific function: Unknown

COG id: COG1215

COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.-.-.- [C]

Molecular weight: Translated: 34021; Mature: 33890

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLSVVICTRNSASTIKDCLDSLMPAYRSSLIREIIIVDAQSTDATCHIAGDYPVRIYFE
CCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEEEECCCEEEEEEE
PGKGVYFGYQYALGIASGEYVLFLDSDAYLDNTSLTSVLNTFTDPEIGLVGVYSFSPDKS
CCCCEEEEEEEEEEECCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCHH
RLGRCAGQWWDYHRMRLLAHSSSSLFGRLYHRVVGFGAVYTSGPCFIASRQCLEATGGFA
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEECCCEEEHHHHHHHHCCCCC
PELYLYYLHPKLAYPGDIMLSKRAVNAGYKAVWANCGRVGHYPPANALELWRQRVNWGRG
CEEEEEEECCCCCCCCCEEEEHHHHCCCHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCC
DAAYLKICRTGFTKRATCVLSRLGSPFMALYLAFRYCNPVHLWYLPLAQLAWLGGYFNFR
CHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCEEEEE
LKR
ECC
>Mature Secondary Structure 
SLSVVICTRNSASTIKDCLDSLMPAYRSSLIREIIIVDAQSTDATCHIAGDYPVRIYFE
CEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEEEECCCEEEEEEE
PGKGVYFGYQYALGIASGEYVLFLDSDAYLDNTSLTSVLNTFTDPEIGLVGVYSFSPDKS
CCCCEEEEEEEEEEECCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCHH
RLGRCAGQWWDYHRMRLLAHSSSSLFGRLYHRVVGFGAVYTSGPCFIASRQCLEATGGFA
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEECCCEEEHHHHHHHHCCCCC
PELYLYYLHPKLAYPGDIMLSKRAVNAGYKAVWANCGRVGHYPPANALELWRQRVNWGRG
CEEEEEEECCCCCCCCCEEEEHHHHCCCHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCC
DAAYLKICRTGFTKRATCVLSRLGSPFMALYLAFRYCNPVHLWYLPLAQLAWLGGYFNFR
CHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCEEEEE
LKR
ECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA