| Definition | Dehalococcoides ethenogenes 195, complete genome. |
|---|---|
| Accession | NC_002936 |
| Length | 1,469,720 |
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The map label for this gene is 57235011
Identifier: 57235011
GI number: 57235011
Start: 200959
End: 202578
Strand: Direct
Name: 57235011
Synonym: DET0209
Alternate gene names: NA
Gene position: 200959-202578 (Clockwise)
Preceding gene: 57235012
Following gene: 57235010
Centisome position: 13.67
GC content: 48.58
Gene sequence:
>1620_bases ATGAAAAACGAAGCCCTTTTGCTTTCGTTTTCAAAGCTGTTTGGCATTTTGGCGCTGGTTTTGTGGGGTTTTAGCCTGGC GGGAAGCACTTTCAGCCCTGACACAGAAAATATACTTAAGCCGCCGCTGCTTCTTTTTGTCTTGGCGGTGGCATCTTTAT GTATAGGGTCGGCATTTCTCTGGAAAATGCGCACCCCGCAAACCCGTTTATTGTGTTTATATACCTTTATAATGTTGATT ATGCTCTGGCTCAGCCCGGTTATTCTGCAGTCCAGCCCGGTCTCTGCCCAGTGGACATATGGCATTTATTACCCCAATAC CCAGTTTATCAGCCAGACCGGCGGTATAGACCCGGCCGCCTATACCTTTCATAACTGGCCGGGGTTTTTTATACTTGATT ATAGTTTGTCTGCGGTATCTGGTACTTCCTGTCTGGATTTTCTGGCTTTTTACGGGCCTTTCCTTATGCAGATATTGATG TTTGTTCCGCTGTACTGTTTATTTAAGAATATTATCCCCAATCCCAATCACCGTTTTGCGGCTATCTGGGTGTTTTATCT GGCAAACTGGGTAGCCCAGATTTATTTTGTGCCTCAGGGGGTAGGGGTTTTCTTTTTGATTTGCCTTTTGGCCCTTATCA CCAGCCCCGGTTTTTCCCTTGCCCAGGGAAATGCCGTTTCCCACCGGGTAGTGGTTATTCTGGTGCTGGCGGCACTTACG GTAACTCATTTGCTGACCTCGGTGGCAGCTTTGCTGTGTGTGGCGGCTTTAATCCTAAGCCGTCTGGTAAAGGGGTTTAA TCTGGGTATTCTGGCAATAGTAATGGTGGGCTGCTGGACTATTTACGGGGCGGCCACTCAGTTTGATTCCCAATTGCCGG AGTTTGTTAACCGGGCTTTTGAGCTTGAAAACCTTTTCCAGTTCAGCTCCGCAGGCAGCGGTGGGGAAGCGGGAGCGGCA TTCCTGCAAATATCTCAGGTAAGATTTATCTTTTCAGGCTTATTTGCCGGTCTGGCGGTTTTGGGGGTGCTTTTATCCCT CAAATACCGTCACCGTTTTGATTTCCCCCTGCTGGCTCTGGAAGGGGTGGCAGCGGTGATTTTATGCAGTATGCTTTACG GTTCGGAATTCTGGACGCGGGCATTTCTGTTTTCGCTGGTGCCCATTGCGTATTTTACGGTTAAACTGCTGCGTAACCGC CTGACTACCCTTATAATGGTGGCCGTTTTATTGGTGGCTATTCCCGGGCATCTGCTGGCTCACTACGGGGCAGTATCTGA TATGGTCAGCCGTTTTGATGTATCTGCCTGGCAATACCTGGAAAACTATACTCAGCGGGGCTATATAAGCGGGGGTATCA GCTATATAAAACCTGACTATCTGAATCTTTCGCTGAAAAAACTAAACTGGCAGGATGGTTTGCTGGTCGGGCAGGACTAT ACAGGCCGTTATCCCCAGTACCTGCAAATAGGCAGGAGTACCGATGTGGACTGGGTTTATTACTATGGGGACAGCCAGCA TGTGCCTGCTCTGGAAACTGTGCTTGAAGATTCGCCTGGGTATGGGCTTATCTACCAGAACCGGGAGATGAATATTTACT TTAATCAGGGGGCCAACTGA
Upstream 100 bases:
>100_bases TGTATCTGGCTTTCAGGTACTGCAACCCGGTTCATTTGTGGTATTTGCCGCTGGCTCAGCTGGCCTGGCTGGGCGGCTAT TTTAATTTCAGGCTGAAAAG
Downstream 100 bases:
>100_bases ATTGGAAGACAGCCTGCCTTTGTCTGTAATAGTTTGTGCCAGAAATGCTGAAAAGACTATCAGCCTCTGCCTGGAGAGCA TCCGTATGAATAACCCTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 539; Mature: 539
Protein sequence:
>539_residues MKNEALLLSFSKLFGILALVLWGFSLAGSTFSPDTENILKPPLLLFVLAVASLCIGSAFLWKMRTPQTRLLCLYTFIMLI MLWLSPVILQSSPVSAQWTYGIYYPNTQFISQTGGIDPAAYTFHNWPGFFILDYSLSAVSGTSCLDFLAFYGPFLMQILM FVPLYCLFKNIIPNPNHRFAAIWVFYLANWVAQIYFVPQGVGVFFLICLLALITSPGFSLAQGNAVSHRVVVILVLAALT VTHLLTSVAALLCVAALILSRLVKGFNLGILAIVMVGCWTIYGAATQFDSQLPEFVNRAFELENLFQFSSAGSGGEAGAA FLQISQVRFIFSGLFAGLAVLGVLLSLKYRHRFDFPLLALEGVAAVILCSMLYGSEFWTRAFLFSLVPIAYFTVKLLRNR LTTLIMVAVLLVAIPGHLLAHYGAVSDMVSRFDVSAWQYLENYTQRGYISGGISYIKPDYLNLSLKKLNWQDGLLVGQDY TGRYPQYLQIGRSTDVDWVYYYGDSQHVPALETVLEDSPGYGLIYQNREMNIYFNQGAN
Sequences:
>Translated_539_residues MKNEALLLSFSKLFGILALVLWGFSLAGSTFSPDTENILKPPLLLFVLAVASLCIGSAFLWKMRTPQTRLLCLYTFIMLI MLWLSPVILQSSPVSAQWTYGIYYPNTQFISQTGGIDPAAYTFHNWPGFFILDYSLSAVSGTSCLDFLAFYGPFLMQILM FVPLYCLFKNIIPNPNHRFAAIWVFYLANWVAQIYFVPQGVGVFFLICLLALITSPGFSLAQGNAVSHRVVVILVLAALT VTHLLTSVAALLCVAALILSRLVKGFNLGILAIVMVGCWTIYGAATQFDSQLPEFVNRAFELENLFQFSSAGSGGEAGAA FLQISQVRFIFSGLFAGLAVLGVLLSLKYRHRFDFPLLALEGVAAVILCSMLYGSEFWTRAFLFSLVPIAYFTVKLLRNR LTTLIMVAVLLVAIPGHLLAHYGAVSDMVSRFDVSAWQYLENYTQRGYISGGISYIKPDYLNLSLKKLNWQDGLLVGQDY TGRYPQYLQIGRSTDVDWVYYYGDSQHVPALETVLEDSPGYGLIYQNREMNIYFNQGAN >Mature_539_residues MKNEALLLSFSKLFGILALVLWGFSLAGSTFSPDTENILKPPLLLFVLAVASLCIGSAFLWKMRTPQTRLLCLYTFIMLI MLWLSPVILQSSPVSAQWTYGIYYPNTQFISQTGGIDPAAYTFHNWPGFFILDYSLSAVSGTSCLDFLAFYGPFLMQILM FVPLYCLFKNIIPNPNHRFAAIWVFYLANWVAQIYFVPQGVGVFFLICLLALITSPGFSLAQGNAVSHRVVVILVLAALT VTHLLTSVAALLCVAALILSRLVKGFNLGILAIVMVGCWTIYGAATQFDSQLPEFVNRAFELENLFQFSSAGSGGEAGAA FLQISQVRFIFSGLFAGLAVLGVLLSLKYRHRFDFPLLALEGVAAVILCSMLYGSEFWTRAFLFSLVPIAYFTVKLLRNR LTTLIMVAVLLVAIPGHLLAHYGAVSDMVSRFDVSAWQYLENYTQRGYISGGISYIKPDYLNLSLKKLNWQDGLLVGQDY TGRYPQYLQIGRSTDVDWVYYYGDSQHVPALETVLEDSPGYGLIYQNREMNIYFNQGAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60019; Mature: 60019
Theoretical pI: Translated: 7.74; Mature: 7.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNEALLLSFSKLFGILALVLWGFSLAGSTFSPDTENILKPPLLLFVLAVASLCIGSAFL CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHH WKMRTPQTRLLCLYTFIMLIMLWLSPVILQSSPVSAQWTYGIYYPNTQFISQTGGIDPAA HHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHCCCCCCCC YTFHNWPGFFILDYSLSAVSGTSCLDFLAFYGPFLMQILMFVPLYCLFKNIIPNPNHRFA CEECCCCCEEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH AIWVFYLANWVAQIYFVPQGVGVFFLICLLALITSPGFSLAQGNAVSHRVVVILVLAALT HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH VTHLLTSVAALLCVAALILSRLVKGFNLGILAIVMVGCWTIYGAATQFDSQLPEFVNRAF HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELENLFQFSSAGSGGEAGAAFLQISQVRFIFSGLFAGLAVLGVLLSLKYRHRFDFPLLAL HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH EGVAAVILCSMLYGSEFWTRAFLFSLVPIAYFTVKLLRNRLTTLIMVAVLLVAIPGHLLA HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HYGAVSDMVSRFDVSAWQYLENYTQRGYISGGISYIKPDYLNLSLKKLNWQDGLLVGQDY HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCHHCEEEEEECCCCCEEECCCC TGRYPQYLQIGRSTDVDWVYYYGDSQHVPALETVLEDSPGYGLIYQNREMNIYFNQGAN CCCCHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHCCCCCCEEEEECCEEEEEECCCCC >Mature Secondary Structure MKNEALLLSFSKLFGILALVLWGFSLAGSTFSPDTENILKPPLLLFVLAVASLCIGSAFL CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHH WKMRTPQTRLLCLYTFIMLIMLWLSPVILQSSPVSAQWTYGIYYPNTQFISQTGGIDPAA HHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHCCCCCCCC YTFHNWPGFFILDYSLSAVSGTSCLDFLAFYGPFLMQILMFVPLYCLFKNIIPNPNHRFA CEECCCCCEEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH AIWVFYLANWVAQIYFVPQGVGVFFLICLLALITSPGFSLAQGNAVSHRVVVILVLAALT HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH VTHLLTSVAALLCVAALILSRLVKGFNLGILAIVMVGCWTIYGAATQFDSQLPEFVNRAF HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELENLFQFSSAGSGGEAGAAFLQISQVRFIFSGLFAGLAVLGVLLSLKYRHRFDFPLLAL HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH EGVAAVILCSMLYGSEFWTRAFLFSLVPIAYFTVKLLRNRLTTLIMVAVLLVAIPGHLLA HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HYGAVSDMVSRFDVSAWQYLENYTQRGYISGGISYIKPDYLNLSLKKLNWQDGLLVGQDY HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCHHCEEEEEECCCCCEEECCCC TGRYPQYLQIGRSTDVDWVYYYGDSQHVPALETVLEDSPGYGLIYQNREMNIYFNQGAN CCCCHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHCCCCCCEEEEECCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA