| Definition | Dehalococcoides ethenogenes 195, complete genome. |
|---|---|
| Accession | NC_002936 |
| Length | 1,469,720 |
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The map label for this gene is 57235007
Identifier: 57235007
GI number: 57235007
Start: 205327
End: 206622
Strand: Direct
Name: 57235007
Synonym: DET0213
Alternate gene names: NA
Gene position: 205327-206622 (Clockwise)
Preceding gene: 57235008
Following gene: 57234996
Centisome position: 13.97
GC content: 49.23
Gene sequence:
>1296_bases GTGAAAGAAAATAAAGCGGGCAGTCCGCCGTCTATACTGGTGCTTTCCAACGCTGATTTTGAAAGCCGGGGCTTTCAGGC AATTGTACGCGGTCTGGAAAACTGTCTGGGAGAAAGCCTGCCGGGGCTTACCTTTGATTATTTCAGCTTTGCCCCTAAGA GATATAACTATCTGGAAAGCAACAGTTTACGGCTGATTCCCCACCCCTGGGCAAAAGGCAGCTCTGAAACGCTGAATATT TTCAGCTACATGGTGCTTATGCCAAAAAGCCTGCTTAAGGCTGTTTATTATAAACTTCGCCCGGCTAAAAACCCTTACCG CCGTTATGCCGCCCTTTTGCATATAAATGTGGATTGTCTGAATGAGACAGATTACGGTTTCAGCTGCGTCTGCCTGAATC TGCTTAAAAGCTGGGCGGGTTTGCGGGCCTTTGGCTGCCCGCTGCTGACGGCCCCGGTGGATATCGGGCCTTTCAATACC CCCGTCAGCCGCTTTCTGGGCAGGTATATACTCTCAAAAGCAAAGCTGGTAGCTTTGCGGGATGAACTCAGCTATGATTA TCTGATTAAGCTTGGGCTTAAGCCTGAAAACCTGTATCTGGGGGCGGATATGGCCTTTCTGATGCCGCCTGCACCGCCCC GGGTGATGGAAGAGGTGCTTACCGCTGAAAAGGCGGTTAAGGATAACCGGCTGATTATAGGCATTTCACCCAGTTTGTTT CAGATGGAACTGGGGAATATATTTGCCGGTTCGGCAGCAGATAAACCCGAAATATACCTTGGGCTGATAGCCTCTCTGGC TGATTTTGCGGCTGATACGCTTGCTGCCCGTATTTATCTTATTCCCCATGTCCACCCTGATGACAGCCGGGTCTGCCGTG AGGTATACAGCCGGATGCACCGCAAAGATAGTGTGCAGGTATTTAACGGTGATTATCCGTCTGAAATCATAAAGGGGCTG ATAGGGGAGTGTAATATTTTTGTAAGCTGCCGCATGCACGCCAGTATTGCCGCTTTGTCTCAGGCTATACCCACCCTGAC TTTAGGCTATCAGGAAAAATACTGGAAACTTTTAGGGGATTACTTGGGGCAGTCTGACTATCTGGTAGATATTAAAATGC CAAAGGCAGAGGATATTCAGGCTACTCTCAGGCAAAAACTGGCCTATATGGCAGCCAACCGCCCTGAAATAAGTGAGCGA ATAAAAGAGCGACTGGAAGTAATAAACCAAAGGGCAGCTTTGTACGGGCAGAAAGTGGCAGAAATAATCAGCCGCGGGAA GCCCGCTTCCCGATAA
Upstream 100 bases:
>100_bases TGGGCTTTCTGGCTGGTGACAGGGGTAATTTTCAGCCCGCTGGCATATTTTTTCCCCGACCAGGTAGCTTCGGGTATGGT GTGCCTCAAAGAGGTTGGTT
Downstream 100 bases:
>100_bases GCCTTTCGGCCAGGCCGCTAAGCCCTGTCCAGAAATGTTTGGCCGGTTCTATAATCAGACTGGAGTTAGTCCTGCCCAAA TGGTAGTTTATGACCTGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: Pyruvyl-Transferase
Number of amino acids: Translated: 431; Mature: 431
Protein sequence:
>431_residues MKENKAGSPPSILVLSNADFESRGFQAIVRGLENCLGESLPGLTFDYFSFAPKRYNYLESNSLRLIPHPWAKGSSETLNI FSYMVLMPKSLLKAVYYKLRPAKNPYRRYAALLHINVDCLNETDYGFSCVCLNLLKSWAGLRAFGCPLLTAPVDIGPFNT PVSRFLGRYILSKAKLVALRDELSYDYLIKLGLKPENLYLGADMAFLMPPAPPRVMEEVLTAEKAVKDNRLIIGISPSLF QMELGNIFAGSAADKPEIYLGLIASLADFAADTLAARIYLIPHVHPDDSRVCREVYSRMHRKDSVQVFNGDYPSEIIKGL IGECNIFVSCRMHASIAALSQAIPTLTLGYQEKYWKLLGDYLGQSDYLVDIKMPKAEDIQATLRQKLAYMAANRPEISER IKERLEVINQRAALYGQKVAEIISRGKPASR
Sequences:
>Translated_431_residues MKENKAGSPPSILVLSNADFESRGFQAIVRGLENCLGESLPGLTFDYFSFAPKRYNYLESNSLRLIPHPWAKGSSETLNI FSYMVLMPKSLLKAVYYKLRPAKNPYRRYAALLHINVDCLNETDYGFSCVCLNLLKSWAGLRAFGCPLLTAPVDIGPFNT PVSRFLGRYILSKAKLVALRDELSYDYLIKLGLKPENLYLGADMAFLMPPAPPRVMEEVLTAEKAVKDNRLIIGISPSLF QMELGNIFAGSAADKPEIYLGLIASLADFAADTLAARIYLIPHVHPDDSRVCREVYSRMHRKDSVQVFNGDYPSEIIKGL IGECNIFVSCRMHASIAALSQAIPTLTLGYQEKYWKLLGDYLGQSDYLVDIKMPKAEDIQATLRQKLAYMAANRPEISER IKERLEVINQRAALYGQKVAEIISRGKPASR >Mature_431_residues MKENKAGSPPSILVLSNADFESRGFQAIVRGLENCLGESLPGLTFDYFSFAPKRYNYLESNSLRLIPHPWAKGSSETLNI FSYMVLMPKSLLKAVYYKLRPAKNPYRRYAALLHINVDCLNETDYGFSCVCLNLLKSWAGLRAFGCPLLTAPVDIGPFNT PVSRFLGRYILSKAKLVALRDELSYDYLIKLGLKPENLYLGADMAFLMPPAPPRVMEEVLTAEKAVKDNRLIIGISPSLF QMELGNIFAGSAADKPEIYLGLIASLADFAADTLAARIYLIPHVHPDDSRVCREVYSRMHRKDSVQVFNGDYPSEIIKGL IGECNIFVSCRMHASIAALSQAIPTLTLGYQEKYWKLLGDYLGQSDYLVDIKMPKAEDIQATLRQKLAYMAANRPEISER IKERLEVINQRAALYGQKVAEIISRGKPASR
Specific function: Unknown
COG id: COG2327
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48253; Mature: 48253
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKENKAGSPPSILVLSNADFESRGFQAIVRGLENCLGESLPGLTFDYFSFAPKRYNYLES CCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEHHHHCCCHHHCCCCC NSLRLIPHPWAKGSSETLNIFSYMVLMPKSLLKAVYYKLRPAKNPYRRYAALLHINVDCL CCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEEEEEEEE NETDYGFSCVCLNLLKSWAGLRAFGCPLLTAPVDIGPFNTPVSRFLGRYILSKAKLVALR CCCCCCHHHHHHHHHHHHHCHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH DELSYDYLIKLGLKPENLYLGADMAFLMPPAPPRVMEEVLTAEKAVKDNRLIIGISPSLF HHCCEEEEEEECCCCCCEEECCCHHEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHH QMELGNIFAGSAADKPEIYLGLIASLADFAADTLAARIYLIPHVHPDDSRVCREVYSRMH HHHHCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHC RKDSVQVFNGDYPSEIIKGLIGECNIFVSCRMHASIAALSQAIPTLTLGYQEKYWKLLGD CCCCEEEECCCCHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHCCCEECCHHHHHHHHHHH YLGQSDYLVDIKMPKAEDIQATLRQKLAYMAANRPEISERIKERLEVINQRAALYGQKVA HCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH EIISRGKPASR HHHHCCCCCCC >Mature Secondary Structure MKENKAGSPPSILVLSNADFESRGFQAIVRGLENCLGESLPGLTFDYFSFAPKRYNYLES CCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEHHHHCCCHHHCCCCC NSLRLIPHPWAKGSSETLNIFSYMVLMPKSLLKAVYYKLRPAKNPYRRYAALLHINVDCL CCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEEEEEEEE NETDYGFSCVCLNLLKSWAGLRAFGCPLLTAPVDIGPFNTPVSRFLGRYILSKAKLVALR CCCCCCHHHHHHHHHHHHHCHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH DELSYDYLIKLGLKPENLYLGADMAFLMPPAPPRVMEEVLTAEKAVKDNRLIIGISPSLF HHCCEEEEEEECCCCCCEEECCCHHEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHH QMELGNIFAGSAADKPEIYLGLIASLADFAADTLAARIYLIPHVHPDDSRVCREVYSRMH HHHHCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHC RKDSVQVFNGDYPSEIIKGLIGECNIFVSCRMHASIAALSQAIPTLTLGYQEKYWKLLGD CCCCEEEECCCCHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHCCCEECCHHHHHHHHHHH YLGQSDYLVDIKMPKAEDIQATLRQKLAYMAANRPEISERIKERLEVINQRAALYGQKVA HCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH EIISRGKPASR HHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA