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The map label for this gene is yvrC [H]

Identifier: 57234969

GI number: 57234969

Start: 239758

End: 240828

Strand: Direct

Name: yvrC [H]

Synonym: DET0250

Alternate gene names: 57234969

Gene position: 239758-240828 (Clockwise)

Preceding gene: 57234970

Following gene: 57234967

Centisome position: 16.31

GC content: 54.53

Gene sequence:

>1071_bases
ATGAGTACAGCTGCCAAATACGCCACCCGCCAGATAACTGACCAGGCCGGACGCCAGGTTCATTTCGGCTGCTTGCCCCA
GCGGATTATATCCCTTGCCCCCAGCCTGACCGAAATAGTGTATGCCCTGGGAGCGGAAGACCTTTTAAAGGGCGTGACTG
ACTACTGTGATTACCCTCCCGAAGCCAAAAACAAGCCCAGGGCTGGCGGTTACAGTACAGTTGACGTCGACCAGATTGGC
AAAATACAGCCGGATTTGATACTGGCCGGGCAGATACACTTAAAAGATATTGTCCCCCGGCTGGAGGCGCTGGGTTATCC
GGTGCTGGTGCTTGAACCAAGCACGGTAGAAGGTTTGCTGGAAACTATCCGGATAGTGGGCAAGTGTACCGGGCGGGCTA
AGGCCGCTGAACTGCTGGCGGAGTCACTGGGCAGGCGGACAGACTTTATAACCGCCAAAATCGCTTCCCTGTCACCGGAA
AACCGCCCCCTGGTTTATGTTTTGCATGAATGCCAGACCTGGAAAACCTTTGGTTCGGATACCATAGGGGATACCCTGAT
TGAGATGGCCGGGGGGTATAATATCGGGCGGGATTTCGGCCGTTATTATCCGTATCCTGCCAAAGAGGATATTAAACTCA
AAAACCCGGATATTATTATTGCCGAAACCGGTTACGGGGATAACCCCCGGGAACCGCTTAATATCGCCCTTGGCGAGCCT
GTTCTGGCAGAGGTAACCGCCCGCCGGACCGGGCGGGTCTTTGGTATCCACAGTGACCTGGTCAGCCGGGCAGGCCCCCG
GATGGTGGACGGGCTGGAGTGTCTGGCTCACCTTATTCACCCGGAGTTATTTCCGGCCAAACCTGCCGTTTGCTGCGGCC
GGGTCTATATAGCCGGGGTAGGGCCGGGTTTGGCTAAGTGGGTTTCACCCAGAGTGAAAGAGCTGGTGGCCGAGGCGGAT
ATACTGGTGGGTTGGAAACAGGACTTGCAACCTGTAAAGGGTCTGATTAAAAGTCAAAAGCTAAAAAACCAGGCGGAGCC
ACTCTCCTTTGCATTATGTTATGTATATTAG

Upstream 100 bases:

>100_bases
GGCTGGGGGAAATGACGGCCAGAGCGGTTACCTCCGCCTGCCGGAAAGCCCTCAGCATCCAGCTGGCCAAAGACCCCAAT
TATCACTCCGGGGGTAAAAA

Downstream 100 bases:

>100_bases
AATCTTTTGATAGAAGCAATAACTCTTCCCAATATATCAGCGTTAGTCATAACTAAATCTTTATAATCTCCATTTGAGGA
CCGCAGAATAATCTGTCCAT

Product: iron ABC transporter, periplasmic iron-binding protein, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 355

Protein sequence:

>356_residues
MSTAAKYATRQITDQAGRQVHFGCLPQRIISLAPSLTEIVYALGAEDLLKGVTDYCDYPPEAKNKPRAGGYSTVDVDQIG
KIQPDLILAGQIHLKDIVPRLEALGYPVLVLEPSTVEGLLETIRIVGKCTGRAKAAELLAESLGRRTDFITAKIASLSPE
NRPLVYVLHECQTWKTFGSDTIGDTLIEMAGGYNIGRDFGRYYPYPAKEDIKLKNPDIIIAETGYGDNPREPLNIALGEP
VLAEVTARRTGRVFGIHSDLVSRAGPRMVDGLECLAHLIHPELFPAKPAVCCGRVYIAGVGPGLAKWVSPRVKELVAEAD
ILVGWKQDLQPVKGLIKSQKLKNQAEPLSFALCYVY

Sequences:

>Translated_356_residues
MSTAAKYATRQITDQAGRQVHFGCLPQRIISLAPSLTEIVYALGAEDLLKGVTDYCDYPPEAKNKPRAGGYSTVDVDQIG
KIQPDLILAGQIHLKDIVPRLEALGYPVLVLEPSTVEGLLETIRIVGKCTGRAKAAELLAESLGRRTDFITAKIASLSPE
NRPLVYVLHECQTWKTFGSDTIGDTLIEMAGGYNIGRDFGRYYPYPAKEDIKLKNPDIIIAETGYGDNPREPLNIALGEP
VLAEVTARRTGRVFGIHSDLVSRAGPRMVDGLECLAHLIHPELFPAKPAVCCGRVYIAGVGPGLAKWVSPRVKELVAEAD
ILVGWKQDLQPVKGLIKSQKLKNQAEPLSFALCYVY
>Mature_355_residues
STAAKYATRQITDQAGRQVHFGCLPQRIISLAPSLTEIVYALGAEDLLKGVTDYCDYPPEAKNKPRAGGYSTVDVDQIGK
IQPDLILAGQIHLKDIVPRLEALGYPVLVLEPSTVEGLLETIRIVGKCTGRAKAAELLAESLGRRTDFITAKIASLSPEN
RPLVYVLHECQTWKTFGSDTIGDTLIEMAGGYNIGRDFGRYYPYPAKEDIKLKNPDIIIAETGYGDNPREPLNIALGEPV
LAEVTARRTGRVFGIHSDLVSRAGPRMVDGLECLAHLIHPELFPAKPAVCCGRVYIAGVGPGLAKWVSPRVKELVAEADI
LVGWKQDLQPVKGLIKSQKLKNQAEPLSFALCYVY

Specific function: Probably part of an ABC transporter complex [H]

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786353, Length=254, Percent_Identity=24.8031496062992, Blast_Score=84, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 38846; Mature: 38715

Theoretical pI: Translated: 7.40; Mature: 7.40

Prosite motif: PS50983 FE_B12_PBP ; PS00289 PENTAXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTAAKYATRQITDQAGRQVHFGCLPQRIISLAPSLTEIVYALGAEDLLKGVTDYCDYPP
CCCHHHHHHHHHHHHHCCEEEECHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHCCCCC
EAKNKPRAGGYSTVDVDQIGKIQPDLILAGQIHLKDIVPRLEALGYPVLVLEPSTVEGLL
CCCCCCCCCCCCEECHHHCCCCCCCEEEECCHHHHHHHHHHHHCCCCEEEECCCHHHHHH
ETIRIVGKCTGRAKAAELLAESLGRRTDFITAKIASLSPENRPLVYVLHECQTWKTFGSD
HHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEECCHHHHHCCCC
TIGDTLIEMAGGYNIGRDFGRYYPYPAKEDIKLKNPDIIIAETGYGDNPREPLNIALGEP
HHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCEECCCCEEEEECCCCCCCCCCCEEECCCH
VLAEVTARRTGRVFGIHSDLVSRAGPRMVDGLECLAHLIHPELFPAKPAVCCGRVYIAGV
HHHHHHHHHCCCEEEEHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCHHCCCEEEEEC
GPGLAKWVSPRVKELVAEADILVGWKQDLQPVKGLIKSQKLKNQAEPLSFALCYVY
CCHHHHHHCHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEC
>Mature Secondary Structure 
STAAKYATRQITDQAGRQVHFGCLPQRIISLAPSLTEIVYALGAEDLLKGVTDYCDYPP
CCHHHHHHHHHHHHHCCEEEECHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHCCCCC
EAKNKPRAGGYSTVDVDQIGKIQPDLILAGQIHLKDIVPRLEALGYPVLVLEPSTVEGLL
CCCCCCCCCCCCEECHHHCCCCCCCEEEECCHHHHHHHHHHHHCCCCEEEECCCHHHHHH
ETIRIVGKCTGRAKAAELLAESLGRRTDFITAKIASLSPENRPLVYVLHECQTWKTFGSD
HHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEECCHHHHHCCCC
TIGDTLIEMAGGYNIGRDFGRYYPYPAKEDIKLKNPDIIIAETGYGDNPREPLNIALGEP
HHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCEECCCCEEEEECCCCCCCCCCCEEECCCH
VLAEVTARRTGRVFGIHSDLVSRAGPRMVDGLECLAHLIHPELFPAKPAVCCGRVYIAGV
HHHHHHHHHCCCEEEEHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCHHCCCEEEEEC
GPGLAKWVSPRVKELVAEADILVGWKQDLQPVKGLIKSQKLKNQAEPLSFALCYVY
CCHHHHHHCHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]