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The map label for this gene is 57234948

Identifier: 57234948

GI number: 57234948

Start: 231907

End: 232677

Strand: Direct

Name: 57234948

Synonym: DET0241

Alternate gene names: NA

Gene position: 231907-232677 (Clockwise)

Preceding gene: 57234949

Following gene: 57234947

Centisome position: 15.78

GC content: 51.49

Gene sequence:

>771_bases
ATGGACAGGCAGACCAATGTTTATCATGTTGCCTATGCCCCGGCTATCAAAAAGGCTTACCTTTTCCACTGGGGATGCAA
CCTGGAATGCAGGGGCTGTTTGTGCAAGAAGGAAATAAACTGCATGGCGCTGGAGGAGAATCTGGACGTGGTCTTCCGTG
ACCCCCGTTTCTGTCCCCCCCAGACCCCGTCTGCCCCGCTTTCCTTCGGTAAGCTCATTTCCCTGCTTCAGGATATAGAA
CTTACCGAGGTGGCCTTTGAAGGGCAGGAAGCCTCGCTTGACCCGATGCTGCCGGATATCTGCCGCTGGCTGAAGGAGCG
GGGCTGCAAGGTAATCCTGCATACCAACGGGGTAGCTATGGCGGATGCCAGCCATATAGATGACGTTATTGTCAGCCTGA
AGGCTATTACCCCTGAAATATATGCCGGCTATACCTGCCGTTCCAACTCAAGCCTGCTTGAAAATTTTAAGGAATACTAT
CAGGCCGGGGTTAACCTGAAGGCTGAAAGCGTGTTTATACCGGGCTATATTGACCTTGAAGAAACCGAAAAAATAGCCAG
GTTTATTGCTTCGGTAGATGAAAATATACCCTACCGGATGGATGCTTATTTTGAATCCGGGGATAATCCCTGGCGGCCGC
CTACGCCTGAGGAGATGCAGACGGCACTGGAAGTGGCCCGCAAGCACCTGAAGAATGTTTATTGCACCCAGCAGACCAAG
CAAAACTTAAGCAAAGCAGACCTGCTGTACGAAGTGGTGCGGCTGTATTAG

Upstream 100 bases:

>100_bases
GGTCAGACAGGGCAAAATTTTAAAGAAGTAAATTGCGAGGGAATTTATGACTATCTCCAACCTTAAATATCAGAATAACC
CGGAGCTTTGGGCAGATAAA

Downstream 100 bases:

>100_bases
ACAGCCGGATAGATTAAGGAGGCTAGAAAATTGACTACTAAGAGTGAACTTAAAAAGATATCTCTGGGTTCGTTTGAAGG
TTTTACGGCCGATACGGTTT

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MDRQTNVYHVAYAPAIKKAYLFHWGCNLECRGCLCKKEINCMALEENLDVVFRDPRFCPPQTPSAPLSFGKLISLLQDIE
LTEVAFEGQEASLDPMLPDICRWLKERGCKVILHTNGVAMADASHIDDVIVSLKAITPEIYAGYTCRSNSSLLENFKEYY
QAGVNLKAESVFIPGYIDLEETEKIARFIASVDENIPYRMDAYFESGDNPWRPPTPEEMQTALEVARKHLKNVYCTQQTK
QNLSKADLLYEVVRLY

Sequences:

>Translated_256_residues
MDRQTNVYHVAYAPAIKKAYLFHWGCNLECRGCLCKKEINCMALEENLDVVFRDPRFCPPQTPSAPLSFGKLISLLQDIE
LTEVAFEGQEASLDPMLPDICRWLKERGCKVILHTNGVAMADASHIDDVIVSLKAITPEIYAGYTCRSNSSLLENFKEYY
QAGVNLKAESVFIPGYIDLEETEKIARFIASVDENIPYRMDAYFESGDNPWRPPTPEEMQTALEVARKHLKNVYCTQQTK
QNLSKADLLYEVVRLY
>Mature_256_residues
MDRQTNVYHVAYAPAIKKAYLFHWGCNLECRGCLCKKEINCMALEENLDVVFRDPRFCPPQTPSAPLSFGKLISLLQDIE
LTEVAFEGQEASLDPMLPDICRWLKERGCKVILHTNGVAMADASHIDDVIVSLKAITPEIYAGYTCRSNSSLLENFKEYY
QAGVNLKAESVFIPGYIDLEETEKIARFIASVDENIPYRMDAYFESGDNPWRPPTPEEMQTALEVARKHLKNVYCTQQTK
QNLSKADLLYEVVRLY

Specific function: Unknown

COG id: COG2896

COG function: function code H; Molybdenum cofactor biosynthesis enzyme

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the organic radical-activating enzymes family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR001989
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 29175; Mature: 29175

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRQTNVYHVAYAPAIKKAYLFHWGCNLECRGCLCKKEINCMALEENLDVVFRDPRFCPP
CCCCCCEEEEEECHHHHHHEEEEECCCCEECCCHHCCCCCEEEEECCCCEEEECCCCCCC
QTPSAPLSFGKLISLLQDIELTEVAFEGQEASLDPMLPDICRWLKERGCKVILHTNGVAM
CCCCCCCCHHHHHHHHHHCHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCEEE
ADASHIDDVIVSLKAITPEIYAGYTCRSNSSLLENFKEYYQAGVNLKAESVFIPGYIDLE
CCHHHHHHHHHHHHHHCHHHHCCEEECCCCHHHHHHHHHHHHCCCCEECEEEECCEECHH
ETEKIARFIASVDENIPYRMDAYFESGDNPWRPPTPEEMQTALEVARKHLKNVYCTQQTK
HHHHHHHHHHHHCCCCCEEEEHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
QNLSKADLLYEVVRLY
HHHHHHHHHHHHHHHC
>Mature Secondary Structure
MDRQTNVYHVAYAPAIKKAYLFHWGCNLECRGCLCKKEINCMALEENLDVVFRDPRFCPP
CCCCCCEEEEEECHHHHHHEEEEECCCCEECCCHHCCCCCEEEEECCCCEEEECCCCCCC
QTPSAPLSFGKLISLLQDIELTEVAFEGQEASLDPMLPDICRWLKERGCKVILHTNGVAM
CCCCCCCCHHHHHHHHHHCHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCEEE
ADASHIDDVIVSLKAITPEIYAGYTCRSNSSLLENFKEYYQAGVNLKAESVFIPGYIDLE
CCHHHHHHHHHHHHHHCHHHHCCEEECCCCHHHHHHHHHHHHCCCCEECEEEECCEECHH
ETEKIARFIASVDENIPYRMDAYFESGDNPWRPPTPEEMQTALEVARKHLKNVYCTQQTK
HHHHHHHHHHHHCCCCCEEEEHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
QNLSKADLLYEVVRLY
HHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]