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The map label for this gene is 57234892

Identifier: 57234892

GI number: 57234892

Start: 332662

End: 334296

Strand: Direct

Name: 57234892

Synonym: DET0348

Alternate gene names: NA

Gene position: 332662-334296 (Clockwise)

Preceding gene: 57234893

Following gene: 57234879

Centisome position: 22.63

GC content: 54.37

Gene sequence:

>1635_bases
ATGGCACGCAAAGACCGCCTCAAGAATCGTAAAGAGCTTTCACGCACCCGGGTTTCTTATGCCTCCTCGGAGAGGGTAGC
CGGTGAAAGCGGGGTTGTTATCAAGGACTGGGGGGGTAGACTGCCGCTGGCAGTTGCTTATCCCAACTCTTATTACGTGG
GGATGTCAAACCTGGGGCTTCATACCCTTTACCGTTTGATAAATAACTATCCTCAATATCTGGCGGAGAGGTTTTTCTGG
GAAGGCGGCGCCGCCAAAGGCCGCCCGACCCTGAGTGTGGAGTCACGCCGCCCTTTTACTGACTATGTGGCGGTTTTATT
CACCCTTTCCTATGAACTGGATTTTCTGAATATCCCCTCTATGCTGGCAGATTGCGGTATGCCGCTCTATGCCCGTGAAC
GGGACGAGACTTTTCCGCTGGTTATCGGCGGGGGGGCCTGCATAATGTCTAACCCCGCACCGGCAGCTGATTTTTTTGAT
GTGTTTTGTATAGGTGAGGCTGAGGCTATTTTGCCGGAGCTGCTGCCTGTGCTTGCCGAAACAGCAGGCGAACCCAAAGG
GCTGGTTCTGGAACGGCTGGCCAAAATTCCCGGTTTATATGTACCGTCTGTGCCCCCGGAGAAACCGGTGGAAAGGGTAT
TTCCGGCAGAACTTACTCAAGGGGCGGGGACAGCGGTTTTCAGCAAAGCAACCGAACTGGGGGAGATGTACCTGATGGAG
GTGGAACGCGGCTGCGGACACCAGTGCCGGTTCTGTCTGGTGGCCGGCGTGTTTTGCCCTCTGCGTTACCACCCTTTGGA
ACTTCTTTTGAAGCAGGCAGAAGAGGGCATGCTTGAGCGAAAGAGGATAGGCCTGGTAGGGCCGGTAGTGAGTGATCACC
CTCAGGCGACGGAGTTGATTTCCCGTTTGCGGGGCATGGGTGTAGGTTTAAGCATCAGTTCACTTCGGATAAAGCCGTTG
CCTGAAAAAATGCTTGGCGAACTGGCACTTTCGGGTGTTTCCAGTCTGGCTATGGCACCTGAGGCCGGTTCAGAGAGGCT
GCGGCGGATTATCCGCAAGGGGATAACCGAAGATGACATAATACGGGCAGCGGCTTTGGTGGCGGAAAAAGGCTTCCGTC
AGCTGAAGTTTTATTTCATGCTGGGGCTGCCGGGTGAGACCGATGAAGATATAGAAGAGATGATAAAGCTGGCCGAGAAA
GCCCAGCAGGTTATGTCTGCTGCGGGGCGGGGAGTAAGATTAAGCCTGAATATTGCCCCGTTTGTGCCCAAGCCCTCCAC
CCCGTTTCAGTGGCTGGGTATGGAAGATGCCGTGCTGGTAAAAAGGCGGCTGGATATAATACGCCTCCGTCTGGAGGGTC
AGGGGATAGAGGTCAGGGCTGAAAGCCCGGAGATGTCCCAGATACAGGCGGTGCTTTCCCGGGGTGATGTTAGTCTTTCA
AAACTGCTGGCGGCTGCGGGGGGTGACTCTCTGGCCTGCTGGAAGCGGGCAGCCAAGTTACTTGAGGTGGACAGCCCATC
TTTGGCTAAAACAAGGTTTGATTTGGCAGATAAACTGCCCTGGCATATGCTGGAAAACCCGAAGCAGAGACAAAGACTGG
AAGCGGAGTATAAAGCGGCTACTAAGGAAATATAA

Upstream 100 bases:

>100_bases
AAGGAAACAACCTCCATGGAACTTCGTAAAGTAGCAGATAAAACTATTACTATAGACGGGCGTCTGCTGCGTAACTGCTG
GAAACAGCAAAGAAACAATT

Downstream 100 bases:

>100_bases
AAGGGAGACTTTTAAAAGTCTCCCTTTTTAGTTTAGAGGGTATTAAGTTTAATTATTCAGAAGTGCGGTGACCAGGTTAT
TCACCATTTGCCCGTCCGCT

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 544; Mature: 543

Protein sequence:

>544_residues
MARKDRLKNRKELSRTRVSYASSERVAGESGVVIKDWGGRLPLAVAYPNSYYVGMSNLGLHTLYRLINNYPQYLAERFFW
EGGAAKGRPTLSVESRRPFTDYVAVLFTLSYELDFLNIPSMLADCGMPLYARERDETFPLVIGGGACIMSNPAPAADFFD
VFCIGEAEAILPELLPVLAETAGEPKGLVLERLAKIPGLYVPSVPPEKPVERVFPAELTQGAGTAVFSKATELGEMYLME
VERGCGHQCRFCLVAGVFCPLRYHPLELLLKQAEEGMLERKRIGLVGPVVSDHPQATELISRLRGMGVGLSISSLRIKPL
PEKMLGELALSGVSSLAMAPEAGSERLRRIIRKGITEDDIIRAAALVAEKGFRQLKFYFMLGLPGETDEDIEEMIKLAEK
AQQVMSAAGRGVRLSLNIAPFVPKPSTPFQWLGMEDAVLVKRRLDIIRLRLEGQGIEVRAESPEMSQIQAVLSRGDVSLS
KLLAAAGGDSLACWKRAAKLLEVDSPSLAKTRFDLADKLPWHMLENPKQRQRLEAEYKAATKEI

Sequences:

>Translated_544_residues
MARKDRLKNRKELSRTRVSYASSERVAGESGVVIKDWGGRLPLAVAYPNSYYVGMSNLGLHTLYRLINNYPQYLAERFFW
EGGAAKGRPTLSVESRRPFTDYVAVLFTLSYELDFLNIPSMLADCGMPLYARERDETFPLVIGGGACIMSNPAPAADFFD
VFCIGEAEAILPELLPVLAETAGEPKGLVLERLAKIPGLYVPSVPPEKPVERVFPAELTQGAGTAVFSKATELGEMYLME
VERGCGHQCRFCLVAGVFCPLRYHPLELLLKQAEEGMLERKRIGLVGPVVSDHPQATELISRLRGMGVGLSISSLRIKPL
PEKMLGELALSGVSSLAMAPEAGSERLRRIIRKGITEDDIIRAAALVAEKGFRQLKFYFMLGLPGETDEDIEEMIKLAEK
AQQVMSAAGRGVRLSLNIAPFVPKPSTPFQWLGMEDAVLVKRRLDIIRLRLEGQGIEVRAESPEMSQIQAVLSRGDVSLS
KLLAAAGGDSLACWKRAAKLLEVDSPSLAKTRFDLADKLPWHMLENPKQRQRLEAEYKAATKEI
>Mature_543_residues
ARKDRLKNRKELSRTRVSYASSERVAGESGVVIKDWGGRLPLAVAYPNSYYVGMSNLGLHTLYRLINNYPQYLAERFFWE
GGAAKGRPTLSVESRRPFTDYVAVLFTLSYELDFLNIPSMLADCGMPLYARERDETFPLVIGGGACIMSNPAPAADFFDV
FCIGEAEAILPELLPVLAETAGEPKGLVLERLAKIPGLYVPSVPPEKPVERVFPAELTQGAGTAVFSKATELGEMYLMEV
ERGCGHQCRFCLVAGVFCPLRYHPLELLLKQAEEGMLERKRIGLVGPVVSDHPQATELISRLRGMGVGLSISSLRIKPLP
EKMLGELALSGVSSLAMAPEAGSERLRRIIRKGITEDDIIRAAALVAEKGFRQLKFYFMLGLPGETDEDIEEMIKLAEKA
QQVMSAAGRGVRLSLNIAPFVPKPSTPFQWLGMEDAVLVKRRLDIIRLRLEGQGIEVRAESPEMSQIQAVLSRGDVSLSK
LLAAAGGDSLACWKRAAKLLEVDSPSLAKTRFDLADKLPWHMLENPKQRQRLEAEYKAATKEI

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 60049; Mature: 59917

Theoretical pI: Translated: 7.97; Mature: 7.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARKDRLKNRKELSRTRVSYASSERVAGESGVVIKDWGGRLPLAVAYPNSYYVGMSNLGL
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCEEEECCCCEEEECCCCCH
HTLYRLINNYPQYLAERFFWEGGAAKGRPTLSVESRRPFTDYVAVLFTLSYELDFLNIPS
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCEECCHH
MLADCGMPLYARERDETFPLVIGGGACIMSNPAPAADFFDVFCIGEAEAILPELLPVLAE
HHHHCCCCCEECCCCCCCCEEEECCEEEECCCCCCCHHHHEEECCCHHHHHHHHHHHHHH
TAGEPKGLVLERLAKIPGLYVPSVPPEKPVERVFPAELTQGAGTAVFSKATELGEMYLME
HCCCCCHHHHHHHHHCCCEECCCCCCCCHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHH
VERGCGHQCRFCLVAGVFCPLRYHPLELLLKQAEEGMLERKRIGLVGPVVSDHPQATELI
HHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCEECCCCCCCCHHHHHH
SRLRGMGVGLSISSLRIKPLPEKMLGELALSGVSSLAMAPEAGSERLRRIIRKGITEDDI
HHHHCCCCCEEECCEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHH
IRAAALVAEKGFRQLKFYFMLGLPGETDEDIEEMIKLAEKAQQVMSAAGRGVRLSLNIAP
HHHHHHHHHHHHHHEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEC
FVPKPSTPFQWLGMEDAVLVKRRLDIIRLRLEGQGIEVRAESPEMSQIQAVLSRGDVSLS
CCCCCCCCCEECCCCHHHHHHHHHHHEEEEECCCCEEEEECCCCHHHHHHHHHCCCHHHH
KLLAAAGGDSLACWKRAAKLLEVDSPSLAKTRFDLADKLPWHMLENPKQRQRLEAEYKAA
HHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHH
TKEI
HCCC
>Mature Secondary Structure 
ARKDRLKNRKELSRTRVSYASSERVAGESGVVIKDWGGRLPLAVAYPNSYYVGMSNLGL
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCEEEECCCCEEEECCCCCH
HTLYRLINNYPQYLAERFFWEGGAAKGRPTLSVESRRPFTDYVAVLFTLSYELDFLNIPS
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCEECCHH
MLADCGMPLYARERDETFPLVIGGGACIMSNPAPAADFFDVFCIGEAEAILPELLPVLAE
HHHHCCCCCEECCCCCCCCEEEECCEEEECCCCCCCHHHHEEECCCHHHHHHHHHHHHHH
TAGEPKGLVLERLAKIPGLYVPSVPPEKPVERVFPAELTQGAGTAVFSKATELGEMYLME
HCCCCCHHHHHHHHHCCCEECCCCCCCCHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHH
VERGCGHQCRFCLVAGVFCPLRYHPLELLLKQAEEGMLERKRIGLVGPVVSDHPQATELI
HHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCEECCCCCCCCHHHHHH
SRLRGMGVGLSISSLRIKPLPEKMLGELALSGVSSLAMAPEAGSERLRRIIRKGITEDDI
HHHHCCCCCEEECCEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHH
IRAAALVAEKGFRQLKFYFMLGLPGETDEDIEEMIKLAEKAQQVMSAAGRGVRLSLNIAP
HHHHHHHHHHHHHHEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEC
FVPKPSTPFQWLGMEDAVLVKRRLDIIRLRLEGQGIEVRAESPEMSQIQAVLSRGDVSLS
CCCCCCCCCEECCCCHHHHHHHHHHHEEEEECCCCEEEEECCCCHHHHHHHHHCCCHHHH
KLLAAAGGDSLACWKRAAKLLEVDSPSLAKTRFDLADKLPWHMLENPKQRQRLEAEYKAA
HHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHH
TKEI
HCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]