| Definition | Dehalococcoides ethenogenes 195, complete genome. |
|---|---|
| Accession | NC_002936 |
| Length | 1,469,720 |
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The map label for this gene is map [H]
Identifier: 57234757
GI number: 57234757
Start: 456533
End: 457288
Strand: Direct
Name: map [H]
Synonym: DET0496
Alternate gene names: 57234757
Gene position: 456533-457288 (Clockwise)
Preceding gene: 57234758
Following gene: 57234756
Centisome position: 31.06
GC content: 51.98
Gene sequence:
>756_bases ATGACCATAATACTGAAAACCGAAAAAGAGATTGCTATAATGCGGCGGGCCGGTCATATACTGGCAGCTGCTTTAGAAGA AGTTAAGAAGAATGTCAGACCGGGGGTAACTACCCGGGAGCTGGACGAGATAGCCGAGAGGGAACTGCGGCGCAGGGGGA CAACTCCTTCGTTCAAAGGTTACCAGGGCTTCCCGGCCAGTCTTTGTGCGTCTGTAAACGAAGAGATTGTTCACGGCATA CCCGGTGGCCGGGTATTAAAAGAAGGCGACATAATATCGCTGGATATAGGCAATATATTAGAAGGATTCCAGGCGGATAT GGCTGTGACAGTGGGGGTGGGTGAAATATCTCCCGCGGCCACGCGGCTTTTATCTGCTACTCAGGCCTCACTGGTGGCCG GGATTGCTCAAGCCAGGGCAGGCGGGCATCTGGGTGACATAGGTGCGGTAGTTGAGGAATATGCCCAAAGCAGAGGGTAT GGGGTAGTCAGGGATTATACCGGACACGGTATAGGCCGGGATATGCACGAAGACCCCCAGATACCGAACTTTGGCCGCCG GGGTAAAGGCCCGGAATTAAAAAAGGGTATGACACTGGCTATAGAGCCAATGTTAAATCTGGGCACTGAAAAGACAAGAG TAGCCCCTGACTGCTGGACAGTGTATACTGCGGATGGCAGTTTGTCGGCTCATTTTGAACATACAGTTGCCATTACCGAT GGTGAGCCGGAAATACTCACCGTGATAGAAGGATAG
Upstream 100 bases:
>100_bases CGCTCAAAGGGCAAGCTGAGTGAGATTGATGGTATGGCTGAGATAACAGAGGTGACCAAGCGGATTGTATCAGCTATAAA GTGCGGTAAATAACCGGTTT
Downstream 100 bases:
>100_bases CGGGGATTTATGCCTAAAAAAGATGCAATAGAAGTTGAAGCGACAGTGCTGGAGGCTTTGCCCAGTGCCGCTTTTCGTGT TCAGCTTTCAAACGGGCATG
Product: methionine aminopeptidase, type I
Products: NA
Alternate protein names: MAP; Peptidase M [H]
Number of amino acids: Translated: 251; Mature: 250
Protein sequence:
>251_residues MTIILKTEKEIAIMRRAGHILAAALEEVKKNVRPGVTTRELDEIAERELRRRGTTPSFKGYQGFPASLCASVNEEIVHGI PGGRVLKEGDIISLDIGNILEGFQADMAVTVGVGEISPAATRLLSATQASLVAGIAQARAGGHLGDIGAVVEEYAQSRGY GVVRDYTGHGIGRDMHEDPQIPNFGRRGKGPELKKGMTLAIEPMLNLGTEKTRVAPDCWTVYTADGSLSAHFEHTVAITD GEPEILTVIEG
Sequences:
>Translated_251_residues MTIILKTEKEIAIMRRAGHILAAALEEVKKNVRPGVTTRELDEIAERELRRRGTTPSFKGYQGFPASLCASVNEEIVHGI PGGRVLKEGDIISLDIGNILEGFQADMAVTVGVGEISPAATRLLSATQASLVAGIAQARAGGHLGDIGAVVEEYAQSRGY GVVRDYTGHGIGRDMHEDPQIPNFGRRGKGPELKKGMTLAIEPMLNLGTEKTRVAPDCWTVYTADGSLSAHFEHTVAITD GEPEILTVIEG >Mature_250_residues TIILKTEKEIAIMRRAGHILAAALEEVKKNVRPGVTTRELDEIAERELRRRGTTPSFKGYQGFPASLCASVNEEIVHGIP GGRVLKEGDIISLDIGNILEGFQADMAVTVGVGEISPAATRLLSATQASLVAGIAQARAGGHLGDIGAVVEEYAQSRGYG VVRDYTGHGIGRDMHEDPQIPNFGRRGKGPELKKGMTLAIEPMLNLGTEKTRVAPDCWTVYTADGSLSAHFEHTVAITDG EPEILTVIEG
Specific function: Removes the amino-terminal methionine from nascent proteins [H]
COG id: COG0024
COG function: function code J; Methionine aminopeptidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M24A family [H]
Homologues:
Organism=Homo sapiens, GI164420681, Length=245, Percent_Identity=37.1428571428571, Blast_Score=174, Evalue=8e-44, Organism=Homo sapiens, GI40385867, Length=246, Percent_Identity=34.1463414634146, Blast_Score=154, Evalue=9e-38, Organism=Escherichia coli, GI1786364, Length=250, Percent_Identity=41.6, Blast_Score=203, Evalue=9e-54, Organism=Escherichia coli, GI1788728, Length=212, Percent_Identity=27.3584905660377, Blast_Score=65, Evalue=3e-12, Organism=Caenorhabditis elegans, GI71996291, Length=250, Percent_Identity=37.2, Blast_Score=166, Evalue=7e-42, Organism=Saccharomyces cerevisiae, GI6323273, Length=247, Percent_Identity=41.2955465587045, Blast_Score=191, Evalue=1e-49, Organism=Drosophila melanogaster, GI21355531, Length=240, Percent_Identity=38.75, Blast_Score=176, Evalue=1e-44, Organism=Drosophila melanogaster, GI24583427, Length=243, Percent_Identity=35.3909465020576, Blast_Score=154, Evalue=6e-38, Organism=Drosophila melanogaster, GI19920384, Length=237, Percent_Identity=21.9409282700422, Blast_Score=74, Evalue=9e-14,
Paralogues:
None
Copy number: 3,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001714 - InterPro: IPR000994 - InterPro: IPR002467 [H]
Pfam domain/function: PF00557 Peptidase_M24 [H]
EC number: =3.4.11.18 [H]
Molecular weight: Translated: 26837; Mature: 26706
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIILKTEKEIAIMRRAGHILAAALEEVKKNVRPGVTTRELDEIAERELRRRGTTPSFKG CEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCC YQGFPASLCASVNEEIVHGIPGGRVLKEGDIISLDIGNILEGFQADMAVTVGVGEISPAA CCCCHHHHHHHHHHHHHHCCCCCCEEECCCEEEEEHHHHHHHHCCCEEEEEECCCCCHHH TRLLSATQASLVAGIAQARAGGHLGDIGAVVEEYAQSRGYGVVRDYTGHGIGRDMHEDPQ HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCC IPNFGRRGKGPELKKGMTLAIEPMLNLGTEKTRVAPDCWTVYTADGSLSAHFEHTVAITD CCCCCCCCCCCCCCCCCEEEEEHHHHCCCCCCCCCCCEEEEEECCCCEEEEEEEEEEEEC GEPEILTVIEG CCCCEEEEECC >Mature Secondary Structure TIILKTEKEIAIMRRAGHILAAALEEVKKNVRPGVTTRELDEIAERELRRRGTTPSFKG EEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCC YQGFPASLCASVNEEIVHGIPGGRVLKEGDIISLDIGNILEGFQADMAVTVGVGEISPAA CCCCHHHHHHHHHHHHHHCCCCCCEEECCCEEEEEHHHHHHHHCCCEEEEEECCCCCHHH TRLLSATQASLVAGIAQARAGGHLGDIGAVVEEYAQSRGYGVVRDYTGHGIGRDMHEDPQ HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCC IPNFGRRGKGPELKKGMTLAIEPMLNLGTEKTRVAPDCWTVYTADGSLSAHFEHTVAITD CCCCCCCCCCCCCCCCCEEEEEHHHHCCCCCCCCCCCEEEEEECCCCEEEEEEEEEEEEC GEPEILTVIEG CCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10192928; 11058132 [H]