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The map label for this gene is rpmC

Identifier: 57234670

GI number: 57234670

Start: 450125

End: 450322

Strand: Direct

Name: rpmC

Synonym: DET0482

Alternate gene names: 57234670

Gene position: 450125-450322 (Clockwise)

Preceding gene: 57234671

Following gene: 57234669

Centisome position: 30.63

GC content: 41.92

Gene sequence:

>198_bases
ATGAATATAAATGATATTCGCGGCCTTTCTGATACTGAAATAAAGAAAAAGCTTGAAGATGCCCACAAGGAACTTTTTGA
GCTTAGACTGAAGCTTTCTACCAGGCAGTTAGTGAATCACCGAGAGCTTCCCAGGGTAAAAAATGATATTGCCCGCATTC
TAACCGTAATGCGTGAGCGCGAACTGCAGATAAGGTAG

Upstream 100 bases:

>100_bases
ATGCGGCTTGCGTCTTATAAAATGCCGGTTAAGACCCGGTTTGTAGCCCGGGATGTACCTGCGGCTGCAGAAGAAACTGA
AGTAGCGGAGGCTGAATAAG

Downstream 100 bases:

>100_bases
GACTGATATGGAAAAAAATAAAACCCGAATCGGTCATGTGATCAGCGATAGGATGGAAAAAACCATTGTAGTGGGTATTG
ATGTTGCCAAGCGCCATCCC

Product: 50S ribosomal protein L29

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 65; Mature: 65

Protein sequence:

>65_residues
MNINDIRGLSDTEIKKKLEDAHKELFELRLKLSTRQLVNHRELPRVKNDIARILTVMRERELQIR

Sequences:

>Translated_65_residues
MNINDIRGLSDTEIKKKLEDAHKELFELRLKLSTRQLVNHRELPRVKNDIARILTVMRERELQIR
>Mature_65_residues
MNINDIRGLSDTEIKKKLEDAHKELFELRLKLSTRQLVNHRELPRVKNDIARILTVMRERELQIR

Specific function: Unknown

COG id: COG0255

COG function: function code J; Ribosomal protein L29

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L29P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL29_DEHE1 (Q3Z973)

Other databases:

- EMBL:   CP000027
- RefSeq:   YP_181226.1
- ProteinModelPortal:   Q3Z973
- SMR:   Q3Z973
- STRING:   Q3Z973
- GeneID:   3230139
- GenomeReviews:   CP000027_GR
- KEGG:   det:DET0482
- NMPDR:   fig|243164.3.peg.744
- TIGR:   DET0482
- eggNOG:   NOG136442
- HOGENOM:   HBG730819
- OMA:   KEIDGFK
- ProtClustDB:   PRK00306
- BioCyc:   DETH243164:DET_0482-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00374_B
- InterPro:   IPR001854
- Gene3D:   G3DSA:1.10.287.310
- TIGRFAMs:   TIGR00012

Pfam domain/function: PF00831 Ribosomal_L29; SSF46561 Ribosomal_L29

EC number: NA

Molecular weight: Translated: 7835; Mature: 7835

Theoretical pI: Translated: 10.75; Mature: 10.75

Prosite motif: PS00579 RIBOSOMAL_L29

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNINDIRGLSDTEIKKKLEDAHKELFELRLKLSTRQLVNHRELPRVKNDIARILTVMRER
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
ELQIR
HHCCC
>Mature Secondary Structure
MNINDIRGLSDTEIKKKLEDAHKELFELRLKLSTRQLVNHRELPRVKNDIARILTVMRER
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
ELQIR
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA