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The map label for this gene is rpe [H]

Identifier: 57234554

GI number: 57234554

Start: 624603

End: 625265

Strand: Direct

Name: rpe [H]

Synonym: DET0676

Alternate gene names: 57234554

Gene position: 624603-625265 (Clockwise)

Preceding gene: 57234555

Following gene: 57234541

Centisome position: 42.5

GC content: 47.96

Gene sequence:

>663_bases
TTGAAAGACGTAAAGATAGTGCCGGCTGTACTTACCGATGACCCTGCGGCCTTTGAGTGTATGCTAAACCAGCTGGAGAG
TTTTGCTCCTTCTGCCCAGATAGATATTATGGACGGGCAGTTTGTGCCTTCGCTAAGCATCCCACCTGAAGTACTGGGCA
GATACAAGCCCCGTTTTGCCTCTGAAATACACCTGATGACCCTTAATCCAGAAGAATACCTTACCTATTGCAAGCAGCAC
GGCGCTTTCAGGGTAATATTCCATTTTGAAGCAACAACCCGCCCCGAATATGTTATCAGCAGGATAAAGGAATTGGGTTT
TCAAGCAGGGCTGGCGGTGAACCCTGAAACACCTGTTTCAGATTTTGCTTATCTGGTGCCGCAGCTGGACATGGTGCTTT
TTATGTCGGTTATTCCCGGTTTTTACGGCGCGCCGTTTATACCTGAGGTGCTCCTGAAGGTAAAAGAGTTTAAACGCCGT
TTTCCCGAAACTGAAATAGGTCTGGACGGCGGTGCTAAAGAGGGCAACATACCTGAGATTGTGGCGGCCGGGGTAAATGA
TATATGCGTGGGAAGTGCTATCTTCCGGCAAACTGACCCTAAGTCAAGCTACCTGTATTTGGATAAACTGGCTAAAAATG
CCTCCAAAGAAGCGGGTATTTAG

Upstream 100 bases:

>100_bases
GGTGTGGCTGAAGGGGATTATGAGCTTTTTTGCCTGCCCTTGAAACTGGGTAAAGTAGACGGTGCCCCCGCCAGAGTAAT
ATTAATAGAGAGATAACAGT

Downstream 100 bases:

>100_bases
CCCTCTTTTTCAGCCTGAAGCAGCTTTTCCAGGCGGCGTTTGTGCCGTTCTTCGCCGGTAAAGCGGGCATTTAAAAAGGC
CGTAATAATCTCTTTGGCTA

Product: ribulose-phosphate 3-epimerase, putative

Products: NA

Alternate protein names: Pentose-5-phosphate 3-epimerase; PPE; R5P3E [H]

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MKDVKIVPAVLTDDPAAFECMLNQLESFAPSAQIDIMDGQFVPSLSIPPEVLGRYKPRFASEIHLMTLNPEEYLTYCKQH
GAFRVIFHFEATTRPEYVISRIKELGFQAGLAVNPETPVSDFAYLVPQLDMVLFMSVIPGFYGAPFIPEVLLKVKEFKRR
FPETEIGLDGGAKEGNIPEIVAAGVNDICVGSAIFRQTDPKSSYLYLDKLAKNASKEAGI

Sequences:

>Translated_220_residues
MKDVKIVPAVLTDDPAAFECMLNQLESFAPSAQIDIMDGQFVPSLSIPPEVLGRYKPRFASEIHLMTLNPEEYLTYCKQH
GAFRVIFHFEATTRPEYVISRIKELGFQAGLAVNPETPVSDFAYLVPQLDMVLFMSVIPGFYGAPFIPEVLLKVKEFKRR
FPETEIGLDGGAKEGNIPEIVAAGVNDICVGSAIFRQTDPKSSYLYLDKLAKNASKEAGI
>Mature_220_residues
MKDVKIVPAVLTDDPAAFECMLNQLESFAPSAQIDIMDGQFVPSLSIPPEVLGRYKPRFASEIHLMTLNPEEYLTYCKQH
GAFRVIFHFEATTRPEYVISRIKELGFQAGLAVNPETPVSDFAYLVPQLDMVLFMSVIPGFYGAPFIPEVLLKVKEFKRR
FPETEIGLDGGAKEGNIPEIVAAGVNDICVGSAIFRQTDPKSSYLYLDKLAKNASKEAGI

Specific function: Unknown

COG id: COG0036

COG function: function code G; Pentose-5-phosphate-3-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulose-phosphate 3-epimerase family [H]

Homologues:

Organism=Homo sapiens, GI40385883, Length=219, Percent_Identity=34.703196347032, Blast_Score=132, Evalue=3e-31,
Organism=Homo sapiens, GI219879828, Length=219, Percent_Identity=32.8767123287671, Blast_Score=121, Evalue=4e-28,
Organism=Homo sapiens, GI24307923, Length=173, Percent_Identity=32.9479768786127, Blast_Score=99, Evalue=4e-21,
Organism=Escherichia coli, GI1789788, Length=209, Percent_Identity=38.755980861244, Blast_Score=127, Evalue=7e-31,
Organism=Escherichia coli, GI1790523, Length=198, Percent_Identity=33.8383838383838, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI1790754, Length=200, Percent_Identity=26.5, Blast_Score=82, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17552948, Length=203, Percent_Identity=32.512315270936, Blast_Score=106, Evalue=7e-24,
Organism=Saccharomyces cerevisiae, GI6322341, Length=218, Percent_Identity=32.5688073394495, Blast_Score=125, Evalue=7e-30,
Organism=Drosophila melanogaster, GI24586301, Length=199, Percent_Identity=31.1557788944724, Blast_Score=104, Evalue=5e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000056
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00834 Ribul_P_3_epim [H]

EC number: =5.1.3.1 [H]

Molecular weight: Translated: 24394; Mature: 24394

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDVKIVPAVLTDDPAAFECMLNQLESFAPSAQIDIMDGQFVPSLSIPPEVLGRYKPRFA
CCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHCCCCCCC
SEIHLMTLNPEEYLTYCKQHGAFRVIFHFEATTRPEYVISRIKELGFQAGLAVNPETPVS
CEEEEEEECHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCEECCCCCHH
DFAYLVPQLDMVLFMSVIPGFYGAPFIPEVLLKVKEFKRRFPETEIGLDGGAKEGNIPEI
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHH
VAAGVNDICVGSAIFRQTDPKSSYLYLDKLAKNASKEAGI
HHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCHHCCCC
>Mature Secondary Structure
MKDVKIVPAVLTDDPAAFECMLNQLESFAPSAQIDIMDGQFVPSLSIPPEVLGRYKPRFA
CCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHCCCCCCC
SEIHLMTLNPEEYLTYCKQHGAFRVIFHFEATTRPEYVISRIKELGFQAGLAVNPETPVS
CEEEEEEECHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCEECCCCCHH
DFAYLVPQLDMVLFMSVIPGFYGAPFIPEVLLKVKEFKRRFPETEIGLDGGAKEGNIPEI
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHH
VAAGVNDICVGSAIFRQTDPKSSYLYLDKLAKNASKEAGI
HHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]