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The map label for this gene is yvrB [H]

Identifier: 57234536

GI number: 57234536

Start: 631774

End: 632778

Strand: Direct

Name: yvrB [H]

Synonym: DET0685

Alternate gene names: 57234536

Gene position: 631774-632778 (Clockwise)

Preceding gene: 57234537

Following gene: 57234527

Centisome position: 42.99

GC content: 50.45

Gene sequence:

>1005_bases
ATGCTCGGGTTGCTTGGATTGCTGCTGCTGGCGGCAATCTTTGCTATTTCATTCGGCTCGGTTGAAGTGCCGTTTTTTAC
CACTATATCCATTATAATTTCAAAAATCCCCTTTATACATATCAGCCCTGACTGGACTGTAAATACCCAGACTATTATTT
GGGATATCCGTTTGCCCAGAGTCCTGCTGGCCGGAGTGGTGGGTATGGCTTTGGCTGTGGCCGGGGCTACATATCAGGGG
CTTTTCTGTAACCCTCTGGCAGACCCTTATCTTATCGGTGTGGCCCAAGGGGCGGCGGTAGGCGCTGTACTGGGGCTGAT
ACTAGGTATCGGTTTTGATATACTGGGTATTTTCGCAACCCCGCTGTTTGCCTTTGTGGGGGCGTTCGGGGCGGTAGGTG
TTGTGTATATGCTGGCCAGGGTGGGAAACCGCCTTACGGTTACCACTTTGATACTGGCCGGTGTGGCACTGGGCTCATTC
CTTACGGCTGTTGTATCGTATTTGATTACGGTCAGCGGCGACAAGATTCACTCTGTTATGTTCTGGCTGATGGGCAGTTT
TTCTATGGCTGCCTGGGACAGTGTAAAAATAGTTGTACCTATTGTAATCATAGGTACTATAGTTATACTTTTATTTGCCC
GTTCGCTGAACCTTATTCAGCTGGGTGAAGAGCAGGCTCAGGAACTGGGGGTAGATGTGGAGCGGATGAAAATCTTCCTC
CTTACGGCAGCTACCCTGATAACAGCCGCAGCGGTATCTTTTGTGGGTATTATCGGTTTTGTGGGTATTATAGTTCCCCA
CGCCGTGAGACTAATCTGGGGGGCGGATTACCGTTTCCTGCTGCCGCTTTCGGCTCTGGTGGGGGCGGTATTTATGATAA
TGGCTGACATTGCCTCCCGTACGTTGGTTGCTCCCAATGAAATCCCGGTGGGGGCTATTACGGCACTGGTGGGTGCGCCC
TTTTTCCTGTATTTGCTTAGAAAACGCACCCGAATGCTCTTTTAG

Upstream 100 bases:

>100_bases
TTTGCAGGTAAGAATGGGTGTTAATACAAGTCTGAATAAAGAAAACTGCCCGGCAGTACCCGGCGGTCTGCACCCTCACT
AGCAGGGCAGGCTTTATGCA

Downstream 100 bases:

>100_bases
GTATATGAAAAATGTTTGAACTTGAAGTCCGGGATATAACCCTGGCCTATGGTGCGGTTGATGTTTTGAGGAATGTCAGC
TTTAAAACCATGCCCGGTGA

Product: ABC-type cobalamin/Fe3+-siderophores transport systems, permease component

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MLGLLGLLLLAAIFAISFGSVEVPFFTTISIIISKIPFIHISPDWTVNTQTIIWDIRLPRVLLAGVVGMALAVAGATYQG
LFCNPLADPYLIGVAQGAAVGAVLGLILGIGFDILGIFATPLFAFVGAFGAVGVVYMLARVGNRLTVTTLILAGVALGSF
LTAVVSYLITVSGDKIHSVMFWLMGSFSMAAWDSVKIVVPIVIIGTIVILLFARSLNLIQLGEEQAQELGVDVERMKIFL
LTAATLITAAAVSFVGIIGFVGIIVPHAVRLIWGADYRFLLPLSALVGAVFMIMADIASRTLVAPNEIPVGAITALVGAP
FFLYLLRKRTRMLF

Sequences:

>Translated_334_residues
MLGLLGLLLLAAIFAISFGSVEVPFFTTISIIISKIPFIHISPDWTVNTQTIIWDIRLPRVLLAGVVGMALAVAGATYQG
LFCNPLADPYLIGVAQGAAVGAVLGLILGIGFDILGIFATPLFAFVGAFGAVGVVYMLARVGNRLTVTTLILAGVALGSF
LTAVVSYLITVSGDKIHSVMFWLMGSFSMAAWDSVKIVVPIVIIGTIVILLFARSLNLIQLGEEQAQELGVDVERMKIFL
LTAATLITAAAVSFVGIIGFVGIIVPHAVRLIWGADYRFLLPLSALVGAVFMIMADIASRTLVAPNEIPVGAITALVGAP
FFLYLLRKRTRMLF
>Mature_334_residues
MLGLLGLLLLAAIFAISFGSVEVPFFTTISIIISKIPFIHISPDWTVNTQTIIWDIRLPRVLLAGVVGMALAVAGATYQG
LFCNPLADPYLIGVAQGAAVGAVLGLILGIGFDILGIFATPLFAFVGAFGAVGVVYMLARVGNRLTVTTLILAGVALGSF
LTAVVSYLITVSGDKIHSVMFWLMGSFSMAAWDSVKIVVPIVIIGTIVILLFARSLNLIQLGEEQAQELGVDVERMKIFL
LTAATLITAAAVSFVGIIGFVGIIVPHAVRLIWGADYRFLLPLSALVGAVFMIMADIASRTLVAPNEIPVGAITALVGAP
FFLYLLRKRTRMLF

Specific function: Probably part of an ABC transporter complex. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0609

COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790740, Length=322, Percent_Identity=35.4037267080745, Blast_Score=172, Evalue=4e-44,
Organism=Escherichia coli, GI1788004, Length=294, Percent_Identity=38.0952380952381, Blast_Score=154, Evalue=8e-39,
Organism=Escherichia coli, GI1790741, Length=289, Percent_Identity=35.9861591695502, Blast_Score=144, Evalue=6e-36,
Organism=Escherichia coli, GI1786805, Length=282, Percent_Identity=36.8794326241135, Blast_Score=142, Evalue=4e-35,
Organism=Escherichia coli, GI1786347, Length=339, Percent_Identity=30.9734513274336, Blast_Score=113, Evalue=2e-26,
Organism=Escherichia coli, GI1786804, Length=278, Percent_Identity=33.0935251798561, Blast_Score=104, Evalue=7e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000522 [H]

Pfam domain/function: PF01032 FecCD [H]

EC number: NA

Molecular weight: Translated: 35436; Mature: 35436

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGLLGLLLLAAIFAISFGSVEVPFFTTISIIISKIPFIHISPDWTVNTQTIIWDIRLPR
CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCEEEECCCCEECCEEEEEECHHHH
VLLAGVVGMALAVAGATYQGLFCNPLADPYLIGVAQGAAVGAVLGLILGIGFDILGIFAT
HHHHHHHHHHHHHHCCCCCCEEECCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
PLFAFVGAFGAVGVVYMLARVGNRLTVTTLILAGVALGSFLTAVVSYLITVSGDKIHSVM
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
FWLMGSFSMAAWDSVKIVVPIVIIGTIVILLFARSLNLIQLGEEQAQELGVDVERMKIFL
HHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHCCCHHHHHHHH
LTAATLITAAAVSFVGIIGFVGIIVPHAVRLIWGADYRFLLPLSALVGAVFMIMADIASR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHC
TLVAPNEIPVGAITALVGAPFFLYLLRKRTRMLF
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLGLLGLLLLAAIFAISFGSVEVPFFTTISIIISKIPFIHISPDWTVNTQTIIWDIRLPR
CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCEEEECCCCEECCEEEEEECHHHH
VLLAGVVGMALAVAGATYQGLFCNPLADPYLIGVAQGAAVGAVLGLILGIGFDILGIFAT
HHHHHHHHHHHHHHCCCCCCEEECCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
PLFAFVGAFGAVGVVYMLARVGNRLTVTTLILAGVALGSFLTAVVSYLITVSGDKIHSVM
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
FWLMGSFSMAAWDSVKIVVPIVIIGTIVILLFARSLNLIQLGEEQAQELGVDVERMKIFL
HHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHCCCHHHHHHHH
LTAATLITAAAVSFVGIIGFVGIIVPHAVRLIWGADYRFLLPLSALVGAVFMIMADIASR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHC
TLVAPNEIPVGAITALVGAPFFLYLLRKRTRMLF
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]