| Definition | Dehalococcoides ethenogenes 195, complete genome. |
|---|---|
| Accession | NC_002936 |
| Length | 1,469,720 |
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The map label for this gene is znuB [C]
Identifier: 57234533
GI number: 57234533
Start: 586981
End: 587802
Strand: Direct
Name: znuB [C]
Synonym: DET0633
Alternate gene names: 57234533
Gene position: 586981-587802 (Clockwise)
Preceding gene: 57234534
Following gene: 57234521
Centisome position: 39.94
GC content: 47.32
Gene sequence:
>822_bases ATGATAGAGGCTTTGGGGTATGGTTTTATCCAGAATGCTATTTGGGCTGGTCTGCTGGCGGCCATAGGCTGCGGGATTAT TGGCAGTTATGTAGTAGTAAAAAAACTGGTATCTATAAGCGGCGGTATTGCCCATGCTTCATTCGGGGGAATAGGGTTGG GATATCTGCTGGGTATCAGCCCTGTGCTTGGGGCATTGGTATTCAGTCTGCTGGCCGCGGCCGGCATGGGTGCCATTACC CGCCGGGGACGTATAAGTGAAGATACGGTTATCGGTATGCTCTGGTCTTTGGGTATGGCTCTGGGTGTTATTTTTATAGG GCTGACACCCGGTTATGCCCCGGACTTATTCAGTTATCTTTTCGGCAATATTCTGACAGTGCCGTCTTCAGATTTGCTGC TTATGCTGGTGCTGGATGCCCTGATAATAGGGGTGGTCTGGCTTTTTTATAAAGAGTTTCTGGGTATATCTTTTGACGAA GAGTTTTGCCGTGTCAGCGGTATGCCTACCGGCCTTTTATACATAATAATGCTGGGGCTTATAGCTTTGACAGTAGTGAT GCTGATACGGGTAGTGGGCATAATACTGGTGATAGCTTTGCTGACTATACCGGCAGCGGTTGCCCGCCGTTTTACTGATA ACCTTTTTAAAATGATGCTGCTTTCAATTGGATTTGGTATGGTCTTCTGTTTGGGCGGTTTGTGGCTTTCATATGTGCTG GACCTGGCTTCGGGGGCTACTATCATACTCTTTAGTGCGGCTGTATTCCTTTTGGTTTGGGCTTTTAAAAACAAAAAGAA GCAAGAGCCGGTCAGAGACTAA
Upstream 100 bases:
>100_bases AGGAAGGGCTGACCGCAGAAGCTTTGTCTGAAACCTATAACTGCCCAATCCAGCTTATTGCGCACGGGCAGGTGCCCCAC CGGGTGCTGAAGGAACACGT
Downstream 100 bases:
>100_bases ACCGGCTGTACCCGCTCCGGATAAAGCCCTTCTTTTCTGGTTAAAAAAACTAGTGTGTACCCAGAGGTCTGGTTTGGGGA AAAACATTCAGCCCGATTAG
Product: cation ABC transporter, permease protein
Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MIEALGYGFIQNAIWAGLLAAIGCGIIGSYVVVKKLVSISGGIAHASFGGIGLGYLLGISPVLGALVFSLLAAAGMGAIT RRGRISEDTVIGMLWSLGMALGVIFIGLTPGYAPDLFSYLFGNILTVPSSDLLLMLVLDALIIGVVWLFYKEFLGISFDE EFCRVSGMPTGLLYIIMLGLIALTVVMLIRVVGIILVIALLTIPAAVARRFTDNLFKMMLLSIGFGMVFCLGGLWLSYVL DLASGATIILFSAAVFLLVWAFKNKKKQEPVRD
Sequences:
>Translated_273_residues MIEALGYGFIQNAIWAGLLAAIGCGIIGSYVVVKKLVSISGGIAHASFGGIGLGYLLGISPVLGALVFSLLAAAGMGAIT RRGRISEDTVIGMLWSLGMALGVIFIGLTPGYAPDLFSYLFGNILTVPSSDLLLMLVLDALIIGVVWLFYKEFLGISFDE EFCRVSGMPTGLLYIIMLGLIALTVVMLIRVVGIILVIALLTIPAAVARRFTDNLFKMMLLSIGFGMVFCLGGLWLSYVL DLASGATIILFSAAVFLLVWAFKNKKKQEPVRD >Mature_273_residues MIEALGYGFIQNAIWAGLLAAIGCGIIGSYVVVKKLVSISGGIAHASFGGIGLGYLLGISPVLGALVFSLLAAAGMGAIT RRGRISEDTVIGMLWSLGMALGVIFIGLTPGYAPDLFSYLFGNILTVPSSDLLLMLVLDALIIGVVWLFYKEFLGISFDE EFCRVSGMPTGLLYIIMLGLIALTVVMLIRVVGIILVIALLTIPAAVARRFTDNLFKMMLLSIGFGMVFCLGGLWLSYVL DLASGATIILFSAAVFLLVWAFKNKKKQEPVRD
Specific function: Involved In The High-Affinity Zinc Uptake Transport System. [C]
COG id: COG1108
COG function: function code P; ABC-type Mn2+/Zn2+ transport systems, permease components
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ABC-3 integral membrane protein family [H]
Homologues:
Organism=Escherichia coli, GI1788166, Length=268, Percent_Identity=29.4776119402985, Blast_Score=120, Evalue=1e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001626 [H]
Pfam domain/function: PF00950 ABC-3 [H]
EC number: NA
Molecular weight: Translated: 29096; Mature: 29096
Theoretical pI: Translated: 8.44; Mature: 8.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEALGYGFIQNAIWAGLLAAIGCGIIGSYVVVKKLVSISGGIAHASFGGIGLGYLLGIS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHH PVLGALVFSLLAAAGMGAITRRGRISEDTVIGMLWSLGMALGVIFIGLTPGYAPDLFSYL HHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH FGNILTVPSSDLLLMLVLDALIIGVVWLFYKEFLGISFDEEFCRVSGMPTGLLYIIMLGL HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHH IALTVVMLIRVVGIILVIALLTIPAAVARRFTDNLFKMMLLSIGFGMVFCLGGLWLSYVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLASGATIILFSAAVFLLVWAFKNKKKQEPVRD HHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MIEALGYGFIQNAIWAGLLAAIGCGIIGSYVVVKKLVSISGGIAHASFGGIGLGYLLGIS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHH PVLGALVFSLLAAAGMGAITRRGRISEDTVIGMLWSLGMALGVIFIGLTPGYAPDLFSYL HHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH FGNILTVPSSDLLLMLVLDALIIGVVWLFYKEFLGISFDEEFCRVSGMPTGLLYIIMLGL HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHH IALTVVMLIRVVGIILVIALLTIPAAVARRFTDNLFKMMLLSIGFGMVFCLGGLWLSYVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLASGATIILFSAAVFLLVWAFKNKKKQEPVRD HHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Zn (II) [Periplasm]; H2O; ATP [C]
Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]