Click here to switch to the map view.

The map label for this gene is porD [H]

Identifier: 57234516

GI number: 57234516

Start: 668914

End: 669174

Strand: Direct

Name: porD [H]

Synonym: DET0725

Alternate gene names: 57234516

Gene position: 668914-669174 (Clockwise)

Preceding gene: 57234517

Following gene: 57234515

Centisome position: 45.51

GC content: 45.98

Gene sequence:

>261_bases
ATGACCCCTGGCTGTATAGTCAGTGAACCCGGAAATGCCAGTCAGTATAAGACTGGTGACTGGCGTTCCCAGCTGCCTGT
GCATAATTTTAAAAAATGTATCAAGTGCGGCTTGTGTTATGTATTCTGCCCCGAAGCTTGTATAAATGAAACCAAAGAGG
GCTTTTTTGAGGCCGACCTTTTCTATTGTAAGGGTTGCGGTATCTGCGCCCATGAATGTCCCACCGGGGCTATTGTTATG
AAGGATGAGGAGGAGAAATAA

Upstream 100 bases:

>100_bases
GCTGCCAAAAATATGGCGGCTATGAAAAAGGCCTTGGAAGAGACCGCTGTAAAGGAGCTTAAAGTTGGCTAAACAGGAAA
ATAAGATTACCTGGCAGGAA

Downstream 100 bases:

>100_bases
TGGCCAGAGTAGGCGTAGAAGTTTCTATCGCTCTGAGTGAGGCAGTCGGGCTTTGCAATGCTGATGTTATTGCCGCTTAT
CCCATTACTCCTCAGACACA

Product: pyruvic-ferredoxin oxidoreductase, delta subunit

Products: acetyl-CoA; CO2; reduced ferredoxin

Alternate protein names: Pyruvate oxidoreductase delta chain; POR; Pyruvic-ferredoxin oxidoreductase subunit delta [H]

Number of amino acids: Translated: 86; Mature: 85

Protein sequence:

>86_residues
MTPGCIVSEPGNASQYKTGDWRSQLPVHNFKKCIKCGLCYVFCPEACINETKEGFFEADLFYCKGCGICAHECPTGAIVM
KDEEEK

Sequences:

>Translated_86_residues
MTPGCIVSEPGNASQYKTGDWRSQLPVHNFKKCIKCGLCYVFCPEACINETKEGFFEADLFYCKGCGICAHECPTGAIVM
KDEEEK
>Mature_85_residues
TPGCIVSEPGNASQYKTGDWRSQLPVHNFKKCIKCGLCYVFCPEACINETKEGFFEADLFYCKGCGICAHECPTGAIVMK
DEEEK

Specific function: Ndh-1 Shuttles Electrons From NADH, Via Fmn And Iron- Sulfur (Fe-S) Centers, To Quinones In The Respiratory Chain. The Immediate Electron Acceptor For The Enzyme In This Species Is Believed To Be Ubiquinone. Couples The Redox Reaction To Proton Translocat

COG id: COG1144

COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, delta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR011898 [H]

Pfam domain/function: PF00037 Fer4 [H]

EC number: 1.2.7.1

Molecular weight: Translated: 9550; Mature: 9419

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

11.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
14.0 %Cys+Met (Translated Protein)
11.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
12.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPGCIVSEPGNASQYKTGDWRSQLPVHNFKKCIKCGLCYVFCPEACINETKEGFFEADL
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCHHHHCHHHCCCCCCCE
FYCKGCGICAHECPTGAIVMKDEEEK
EEECCCCCCCCCCCCCEEEECCCCCC
>Mature Secondary Structure 
TPGCIVSEPGNASQYKTGDWRSQLPVHNFKKCIKCGLCYVFCPEACINETKEGFFEADL
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCHHHHCHHHCCCCCCCE
FYCKGCGICAHECPTGAIVMKDEEEK
EEECCCCCCCCCCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: pyruvate; CoA; oxidized ferredoxin

Specific reaction: pyruvate + CoA + oxidized ferredoxin = acetyl-CoA + CO2 + reduced ferredoxin

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]