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The map label for this gene is sufB [C]

Identifier: 57234451

GI number: 57234451

Start: 745826

End: 747061

Strand: Direct

Name: sufB [C]

Synonym: DET0816

Alternate gene names: 57234451

Gene position: 745826-747061 (Clockwise)

Preceding gene: 57234452

Following gene: 57234438

Centisome position: 50.75

GC content: 47.82

Gene sequence:

>1236_bases
ATGTCCCCGAAAGATCTAAGGCCCAATCTGGCTGATAAAGCCGGTGCTGCTGTAAATAAAAAACCCGCCATCGGTGATGA
TATTTTATTAGAAAAATATACCGATAATACCGATGACCATAAATACGTAAATAAACCATCTGAGCTTGGGGCTGAAGATA
AATCCCGTATGCTTGAGTCAGGTGTAATACTGGATGACCTTAAGGAACGCAGCGGAACATTTATCCAGATGGATAACCGC
CCCGTCCATTTCTCTACCCAGCAGGATGGCATAGAGATTATGTCAACCAGTGAAGCCGCTTTGAAGTATGACTGGCTGAA
AGATTACTGGTGGAAAGCGGTATCTGTAGATGCGGATAAATATACCGCCCATGTTGAGCTTAACAAGGCAGACGGCTATT
TTATACGGGCGCTTCCCGGCGTAAAAACCGAATTCCCCGTTCAGTCCTGTATGTACATGGCTAAAAACCAGGCTATACAG
AATGTCCACAACATTATTATTGCCGAAGAAGGTTCCGAGCTGCATATTATTACCGGCTGTACTTCCGCTCACCGCACTGA
GACCGGTCTGCATCTGGGTGTGACCGAGTTTTTTATAAAAAAGGGCGCTAAAGTAACCTTTACCATGATACACACCTGGT
CACCGGATATAGCCGTGCGTCCGCGTACCGGTGCCATAGTGGAAGAGGACGGGGTTTTCCTGAGTAATTACGTTGTCATG
AAAACTGTTAAAAACCTGCAGTCATACCCGGTGGCCTATCTGAACGGTGAAAATGCAGTTGCCCGTTTTAACAGTGTTAT
GGTTTGCCCTCCCGGCTCTAAAATGGATGTCGGTTCGCGGGTCTTTTTAAATGCCAGGCATACCCGGACAGAGCTTATTA
CCCGCGCCCTGACCACCGGCGGGGAGATTATCTCCCGCGGGTATATTGAAGGAAAAGTGCCGGATTGCAAGGGGCATCTG
GAGTGCCGCGGGCTTATTCTGGGTGATAACGGCATTATTTATGCCATACCGGAGCTTATGGGTAAGGTGGCCGGAGTGGA
TTTGTCTCATGAGGCTGCGGTGGGTAAAATAGCCGAAGAGGAAGTTGAATACCTGATGGCCAGAGGGTTAAATAAAGATG
AAGCTACGGCTGCCATTGTACGCGGCTTTTTGAATGTAGATGTTGAGGGCCTGCCTCCCCTGCTTAAGGAAGAAATGGAT
AAAGCCATTAAGCTGGGTGACCAGGAAGGAATGTAA

Upstream 100 bases:

>100_bases
GTACCGGTTATGTGCTCTGCCACGGACGCATAAATTGCACCGGTGACCCGCGGGATATGCTGGAAACTATAAAGCAGAAC
GGTTATCAGGAGTGTGTAGA

Downstream 100 bases:

>100_bases
TAATAATATTACATTAACTGTATAAAAAAACCCTCTGGAGACAGAGGGCTTTTTTATGTGTATAAGGTGCTAGTATATAT
GATAAAAACCGTCTTTGCTC

Product: sufB/SufD domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 411; Mature: 410

Protein sequence:

>411_residues
MSPKDLRPNLADKAGAAVNKKPAIGDDILLEKYTDNTDDHKYVNKPSELGAEDKSRMLESGVILDDLKERSGTFIQMDNR
PVHFSTQQDGIEIMSTSEAALKYDWLKDYWWKAVSVDADKYTAHVELNKADGYFIRALPGVKTEFPVQSCMYMAKNQAIQ
NVHNIIIAEEGSELHIITGCTSAHRTETGLHLGVTEFFIKKGAKVTFTMIHTWSPDIAVRPRTGAIVEEDGVFLSNYVVM
KTVKNLQSYPVAYLNGENAVARFNSVMVCPPGSKMDVGSRVFLNARHTRTELITRALTTGGEIISRGYIEGKVPDCKGHL
ECRGLILGDNGIIYAIPELMGKVAGVDLSHEAAVGKIAEEEVEYLMARGLNKDEATAAIVRGFLNVDVEGLPPLLKEEMD
KAIKLGDQEGM

Sequences:

>Translated_411_residues
MSPKDLRPNLADKAGAAVNKKPAIGDDILLEKYTDNTDDHKYVNKPSELGAEDKSRMLESGVILDDLKERSGTFIQMDNR
PVHFSTQQDGIEIMSTSEAALKYDWLKDYWWKAVSVDADKYTAHVELNKADGYFIRALPGVKTEFPVQSCMYMAKNQAIQ
NVHNIIIAEEGSELHIITGCTSAHRTETGLHLGVTEFFIKKGAKVTFTMIHTWSPDIAVRPRTGAIVEEDGVFLSNYVVM
KTVKNLQSYPVAYLNGENAVARFNSVMVCPPGSKMDVGSRVFLNARHTRTELITRALTTGGEIISRGYIEGKVPDCKGHL
ECRGLILGDNGIIYAIPELMGKVAGVDLSHEAAVGKIAEEEVEYLMARGLNKDEATAAIVRGFLNVDVEGLPPLLKEEMD
KAIKLGDQEGM
>Mature_410_residues
SPKDLRPNLADKAGAAVNKKPAIGDDILLEKYTDNTDDHKYVNKPSELGAEDKSRMLESGVILDDLKERSGTFIQMDNRP
VHFSTQQDGIEIMSTSEAALKYDWLKDYWWKAVSVDADKYTAHVELNKADGYFIRALPGVKTEFPVQSCMYMAKNQAIQN
VHNIIIAEEGSELHIITGCTSAHRTETGLHLGVTEFFIKKGAKVTFTMIHTWSPDIAVRPRTGAIVEEDGVFLSNYVVMK
TVKNLQSYPVAYLNGENAVARFNSVMVCPPGSKMDVGSRVFLNARHTRTELITRALTTGGEIISRGYIEGKVPDCKGHLE
CRGLILGDNGIIYAIPELMGKVAGVDLSHEAAVGKIAEEEVEYLMARGLNKDEATAAIVRGFLNVDVEGLPPLLKEEMDK
AIKLGDQEGM

Specific function: Unknown

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=292, Percent_Identity=23.2876712328767, Blast_Score=98, Evalue=8e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 45306; Mature: 45175

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPKDLRPNLADKAGAAVNKKPAIGDDILLEKYTDNTDDHKYVNKPSELGAEDKSRMLES
CCCCCCCCCCHHHCCCCCCCCCCCCCHHEEEECCCCCCCCHHCCCHHHCCCHHHHHHHHC
GVILDDLKERSGTFIQMDNRPVHFSTQQDGIEIMSTSEAALKYDWLKDYWWKAVSVDADK
CCHHHHHHHCCCCEEEECCCCEEECCCCCCEEEEECCCHHHHHHHHHHHHHEEEEECCCC
YTAHVELNKADGYFIRALPGVKTEFPVQSCMYMAKNQAIQNVHNIIIAEEGSELHIITGC
EEEEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCEEEEEECC
TSAHRTETGLHLGVTEFFIKKGAKVTFTMIHTWSPDIAVRPRTGAIVEEDGVFLSNYVVM
CCCCCCCCCCEECHHHHHHHCCCEEEEEEEEECCCCEEECCCCCCEEECCCEEEHHHHHH
KTVKNLQSYPVAYLNGENAVARFNSVMVCPPGSKMDVGSRVFLNARHTRTELITRALTTG
HHHHHHHHCCEEEECCCCCEEHHCEEEEECCCCCCCCCCEEEEECCHHHHHHHHHHHHCC
GEIISRGYIEGKVPDCKGHLECRGLILGDNGIIYAIPELMGKVAGVDLSHEAAVGKIAEE
CHHHHCCEECCCCCCCCCCEEEEEEEECCCCEEEECHHHHHHHHCCCCCCHHHHHHHHHH
EVEYLMARGLNKDEATAAIVRGFLNVDVEGLPPLLKEEMDKAIKLGDQEGM
HHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SPKDLRPNLADKAGAAVNKKPAIGDDILLEKYTDNTDDHKYVNKPSELGAEDKSRMLES
CCCCCCCCCHHHCCCCCCCCCCCCCHHEEEECCCCCCCCHHCCCHHHCCCHHHHHHHHC
GVILDDLKERSGTFIQMDNRPVHFSTQQDGIEIMSTSEAALKYDWLKDYWWKAVSVDADK
CCHHHHHHHCCCCEEEECCCCEEECCCCCCEEEEECCCHHHHHHHHHHHHHEEEEECCCC
YTAHVELNKADGYFIRALPGVKTEFPVQSCMYMAKNQAIQNVHNIIIAEEGSELHIITGC
EEEEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCEEEEEECC
TSAHRTETGLHLGVTEFFIKKGAKVTFTMIHTWSPDIAVRPRTGAIVEEDGVFLSNYVVM
CCCCCCCCCCEECHHHHHHHCCCEEEEEEEEECCCCEEECCCCCCEEECCCEEEHHHHHH
KTVKNLQSYPVAYLNGENAVARFNSVMVCPPGSKMDVGSRVFLNARHTRTELITRALTTG
HHHHHHHHCCEEEECCCCCEEHHCEEEEECCCCCCCCCCEEEEECCHHHHHHHHHHHHCC
GEIISRGYIEGKVPDCKGHLECRGLILGDNGIIYAIPELMGKVAGVDLSHEAAVGKIAEE
CHHHHCCEECCCCCCCCCCEEEEEEEECCCCEEEECHHHHHHHHCCCCCCHHHHHHHHHH
EVEYLMARGLNKDEATAAIVRGFLNVDVEGLPPLLKEEMDKAIKLGDQEGM
HHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]