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The map label for this gene is ybhR [H]

Identifier: 57234387

GI number: 57234387

Start: 732216

End: 733235

Strand: Direct

Name: ybhR [H]

Synonym: DET0795

Alternate gene names: 57234387

Gene position: 732216-733235 (Clockwise)

Preceding gene: 57234396

Following gene: 57234385

Centisome position: 49.82

GC content: 49.61

Gene sequence:

>1020_bases
TTGTTTTTTACCCTGGCTTTCCCGGTACTCTTTATCATTATGTTCGGGCTGGTTTTCAGCGGTACAGACAAGATTAATTA
TGATGTTGCCCTGGTAAACGAAGACGATTCGCAGATAAGTCAGGGTATAGTTCAGGCTTTCAGTCAGGTAAGCATATTTT
CAGTGCAGGATAACCCGCGGGATGACAGTCTGCAGCTTCTTACAGACGGTAAGCTCAAGGCAGTTATAATACTGCCGGAG
GGTTTGGGGCAGGCGGCTCTGTCCGGGCAGACTACCGAGGTGCAGGTCTATTATGACGGCTCTCAGACCAGCGTAAACCA
GATTATTTTGCCGGTGGTCAAAGAGATACTTCAGAGTATCAACCGTGAGATAACCCAGACGCCCGTTTTGTTTGAGATAA
GCGAAGAGACTATTCAGACCAAAGACATGAGTATGATGAGTTTCTTTATCCCCGGTGTGCTGGCCATGTCTATCATGTTC
CTGGGAATTTATTCGGCCATGCCGCTTATTCAGCAGAGGGAAAAGAAGATTTTGAAACGGCTGGGGGCTTCCCCTATTTC
CCGCTCCACTATTATATTCAGCCAGGTGGTGCTCAGGCTGGGGCTGGCAGTGCTTCAGACCGTTATCATTATAGTCATCG
GGCAGCTTATGTTCGGCGTGGAGATTTTAGGCAACTGGTGGCTGCTATTAGGGCTGGTGATGCTGGGAACGCTGTCATTT
ATCAGTCTGGGCTTTCTGGTGGCTTCACTGGCCAAGACCGAAGAGGGTGCTATGCCCATTGTGCAGCTTATCCAGTTCCC
CATGATGTTCCTTTCCGGCATTTTCTTTCCGCTGGAATATATGCCGGATTTCATGCGCCCGGTGGTAAATGCTTTACCGC
TGACCTATTTGGGTGATGCCTTCAGACAGGTAATGGTGGACGGAGCTCCTGTTTTCCCGCTGGGGGTTGATTTGCTGGTA
GTCACAGGCTGGCTGGTGGTCTGTATGGTTATCTCAGTCCGCTTTTTCCGCTGGGAATGA

Upstream 100 bases:

>100_bases
ACGTATTCTTGAAACTGACCGGCAGGAAGATAAGAGAATGAATTCATTTTTAAATATGCTAAATGCCAATTTCAAGTAAT
TTCTTCGGGACAAGACCGCT

Downstream 100 bases:

>100_bases
CCAGTTTTTGCGAATAATAAAACTAAAGGCCGGGAATTAAACCCGGCCTTTGTTATTTATGGGTAATTTTTGGGGGTGTT
TTATAAAACCAGCATGGCAT

Product: ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MFFTLAFPVLFIIMFGLVFSGTDKINYDVALVNEDDSQISQGIVQAFSQVSIFSVQDNPRDDSLQLLTDGKLKAVIILPE
GLGQAALSGQTTEVQVYYDGSQTSVNQIILPVVKEILQSINREITQTPVLFEISEETIQTKDMSMMSFFIPGVLAMSIMF
LGIYSAMPLIQQREKKILKRLGASPISRSTIIFSQVVLRLGLAVLQTVIIIVIGQLMFGVEILGNWWLLLGLVMLGTLSF
ISLGFLVASLAKTEEGAMPIVQLIQFPMMFLSGIFFPLEYMPDFMRPVVNALPLTYLGDAFRQVMVDGAPVFPLGVDLLV
VTGWLVVCMVISVRFFRWE

Sequences:

>Translated_339_residues
MFFTLAFPVLFIIMFGLVFSGTDKINYDVALVNEDDSQISQGIVQAFSQVSIFSVQDNPRDDSLQLLTDGKLKAVIILPE
GLGQAALSGQTTEVQVYYDGSQTSVNQIILPVVKEILQSINREITQTPVLFEISEETIQTKDMSMMSFFIPGVLAMSIMF
LGIYSAMPLIQQREKKILKRLGASPISRSTIIFSQVVLRLGLAVLQTVIIIVIGQLMFGVEILGNWWLLLGLVMLGTLSF
ISLGFLVASLAKTEEGAMPIVQLIQFPMMFLSGIFFPLEYMPDFMRPVVNALPLTYLGDAFRQVMVDGAPVFPLGVDLLV
VTGWLVVCMVISVRFFRWE
>Mature_339_residues
MFFTLAFPVLFIIMFGLVFSGTDKINYDVALVNEDDSQISQGIVQAFSQVSIFSVQDNPRDDSLQLLTDGKLKAVIILPE
GLGQAALSGQTTEVQVYYDGSQTSVNQIILPVVKEILQSINREITQTPVLFEISEETIQTKDMSMMSFFIPGVLAMSIMF
LGIYSAMPLIQQREKKILKRLGASPISRSTIIFSQVVLRLGLAVLQTVIIIVIGQLMFGVEILGNWWLLLGLVMLGTLSF
ISLGFLVASLAKTEEGAMPIVQLIQFPMMFLSGIFFPLEYMPDFMRPVVNALPLTYLGDAFRQVMVDGAPVFPLGVDLLV
VTGWLVVCMVISVRFFRWE

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787010, Length=315, Percent_Identity=24.1269841269841, Blast_Score=84, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24650855, Length=375, Percent_Identity=22.4, Blast_Score=83, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24650853, Length=375, Percent_Identity=22.4, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI85725260, Length=385, Percent_Identity=21.5584415584416, Blast_Score=75, Evalue=5e-14,
Organism=Drosophila melanogaster, GI85725262, Length=385, Percent_Identity=21.5584415584416, Blast_Score=75, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 37644; Mature: 37644

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFTLAFPVLFIIMFGLVFSGTDKINYDVALVNEDDSQISQGIVQAFSQVSIFSVQDNPR
CCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHEEEEECCCCC
DDSLQLLTDGKLKAVIILPEGLGQAALSGQTTEVQVYYDGSQTSVNQIILPVVKEILQSI
CCCEEEEECCCEEEEEEECCCCCCHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHH
NREITQTPVLFEISEETIQTKDMSMMSFFIPGVLAMSIMFLGIYSAMPLIQQREKKILKR
HHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGASPISRSTIIFSQVVLRLGLAVLQTVIIIVIGQLMFGVEILGNWWLLLGLVMLGTLSF
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISLGFLVASLAKTEEGAMPIVQLIQFPMMFLSGIFFPLEYMPDFMRPVVNALPLTYLGDA
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
FRQVMVDGAPVFPLGVDLLVVTGWLVVCMVISVRFFRWE
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFFTLAFPVLFIIMFGLVFSGTDKINYDVALVNEDDSQISQGIVQAFSQVSIFSVQDNPR
CCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHEEEEECCCCC
DDSLQLLTDGKLKAVIILPEGLGQAALSGQTTEVQVYYDGSQTSVNQIILPVVKEILQSI
CCCEEEEECCCEEEEEEECCCCCCHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHH
NREITQTPVLFEISEETIQTKDMSMMSFFIPGVLAMSIMFLGIYSAMPLIQQREKKILKR
HHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGASPISRSTIIFSQVVLRLGLAVLQTVIIIVIGQLMFGVEILGNWWLLLGLVMLGTLSF
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISLGFLVASLAKTEEGAMPIVQLIQFPMMFLSGIFFPLEYMPDFMRPVVNALPLTYLGDA
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
FRQVMVDGAPVFPLGVDLLVVTGWLVVCMVISVRFFRWE
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]