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The map label for this gene is yfiV [H]

Identifier: 57234350

GI number: 57234350

Start: 798805

End: 799290

Strand: Direct

Name: yfiV [H]

Synonym: DET0871

Alternate gene names: 57234350

Gene position: 798805-799290 (Clockwise)

Preceding gene: 57234353

Following gene: 57234349

Centisome position: 54.35

GC content: 50.0

Gene sequence:

>486_bases
ATGACACCTGAAACGTGCTCTGAAGATGCAAAATTTGTGCTGGTAAAAGATATTCTGGGGTTTATCCAGAAACTTTATAC
CGAAGCCCTGGTAGTCCCCCAGGGGCTGCTGGAAACCGAAATCACCATGCCCCAGCTGCAGGTGCTTTTACTTCTGCGCC
AGCACGGCCCTCTCTCCATGGGGATAATATCCAAGAAACTTTGCGTCGGGCTTGCTACCCTGACCGGCATTGTTGACCGT
CTGGTCAGGCAGGGTTTTGTAGAACGAGAAACTCCGCCCGATAACCGCCGGGTGGTCATCTGCCACCTTACCCCAAAAGG
TAATGACCATTACCAGAGCCTGTGGCAGTTTACCACCGACAAAGTAGCCGAACTGCTGGACGGGGTAGATAACGAAGGCT
TATCCATAATCCGGAATGGGTTTTGCCAGCTTGAAAAATCCATTGCCAATAAATTAACAGCGGCAGAAAGTACTGACAGG
ATTTAA

Upstream 100 bases:

>100_bases
CAGGGTTTGACACCGTTTTTAGGCCTGATTATAATTAGTGCTATACAAAATATTTTAGTACTGATAAATATATATATGAC
ACGATGTATAGAGGAAAAAC

Downstream 100 bases:

>100_bases
AAATATGTTCAAGACTATTGCAAATTGGGTTATCAAATTTAAATATCTGGTAGTCAGTTTCTGGGTGATACTGGCTGCGG
TAATGGCGCTTTCCGCCCCA

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MTPETCSEDAKFVLVKDILGFIQKLYTEALVVPQGLLETEITMPQLQVLLLLRQHGPLSMGIISKKLCVGLATLTGIVDR
LVRQGFVERETPPDNRRVVICHLTPKGNDHYQSLWQFTTDKVAELLDGVDNEGLSIIRNGFCQLEKSIANKLTAAESTDR
I

Sequences:

>Translated_161_residues
MTPETCSEDAKFVLVKDILGFIQKLYTEALVVPQGLLETEITMPQLQVLLLLRQHGPLSMGIISKKLCVGLATLTGIVDR
LVRQGFVERETPPDNRRVVICHLTPKGNDHYQSLWQFTTDKVAELLDGVDNEGLSIIRNGFCQLEKSIANKLTAAESTDR
I
>Mature_160_residues
TPETCSEDAKFVLVKDILGFIQKLYTEALVVPQGLLETEITMPQLQVLLLLRQHGPLSMGIISKKLCVGLATLTGIVDRL
VRQGFVERETPPDNRRVVICHLTPKGNDHYQSLWQFTTDKVAELLDGVDNEGLSIIRNGFCQLEKSIANKLTAAESTDRI

Specific function: Repressor Of The Marrab Operon Which Is Involved In The Activation Of Both Antibiotic Resistance And Oxidative Stress Genes. Binds To The Maro Operator/Promoter Site. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 17932; Mature: 17801

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPETCSEDAKFVLVKDILGFIQKLYTEALVVPQGLLETEITMPQLQVLLLLRQHGPLSM
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHCCCCHH
GIISKKLCVGLATLTGIVDRLVRQGFVERETPPDNRRVVICHLTPKGNDHYQSLWQFTTD
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHH
KVAELLDGVDNEGLSIIRNGFCQLEKSIANKLTAAESTDRI
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TPETCSEDAKFVLVKDILGFIQKLYTEALVVPQGLLETEITMPQLQVLLLLRQHGPLSM
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHCCCCHH
GIISKKLCVGLATLTGIVDRLVRQGFVERETPPDNRRVVICHLTPKGNDHYQSLWQFTTD
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHH
KVAELLDGVDNEGLSIIRNGFCQLEKSIANKLTAAESTDRI
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]