| Definition | Dehalococcoides ethenogenes 195, complete genome. |
|---|---|
| Accession | NC_002936 |
| Length | 1,469,720 |
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The map label for this gene is 57234280
Identifier: 57234280
GI number: 57234280
Start: 908144
End: 908788
Strand: Direct
Name: 57234280
Synonym: DET0989
Alternate gene names: NA
Gene position: 908144-908788 (Clockwise)
Preceding gene: 57234282
Following gene: 57234261
Centisome position: 61.79
GC content: 45.43
Gene sequence:
>645_bases ATGTCATCATCCAATAATCAGGCCCTGAAAACACTGAGAAACCGCTTTTTGACCGGGCTGGCCTTTGTCTTACCCATAGG GGCGGCTCTGGGATTGCTGATTTGGGTATTTAACATTATAGACGGGCTACTAAAGCCGGTTATAGAGTTTTTCTTTAACT GGTACTTCCCCGGCCTGGGTCTTCTGGTAACCCTGGTCCTGATATATCTGGTGGGTCTGATTTTAAGCAACTATTTTGGT AAACAAATACTGGGCTGGGTTGATAAAATACTAGTCAAAGTACCCATTTTCAATCAGGTATATAACAGTGCCAAGCAGGT TATAGAAACGCTGGGAGTAAGCAATAAGGTCTCTTTCAAAGAGGCGGTAATGGTGGAATTTCCCCGCACCGGAATGCACA GTCTGGCGTTTATCACCAATGAAACCACAAATTCGGCTGGTGAAAAATTGTATCTGGTATACGTGCCCGGCTCTCCAAAC CCCACCAGCGGTTTTTTGGAACTCCTCAGGGAGAACCAGATTGAACGGGTAAATGTTTCGGTTGAAGATGCCATGAAAAC CCTTATTTCCTGCGGTCTGGTATTTCCGGATAATGTTCAGGCGATTGATGTCGGCAAAGGGGATTTGCACCCCAATAAAC TCTAG
Upstream 100 bases:
>100_bases TTATATTTAAACTGCAGAGGGCATTCAAATTAAAAATAATATATTCTTTTTGCCCTTTACTGCTAGAATATATAAAACCA TATGCACCCGGAGGTCAAAT
Downstream 100 bases:
>100_bases GACACCAGTTTTCGGGCATAAAGAAGGGCGGGATTTAAACCCCGCCCTTTGTTTTTGATTTCAGCTAACAGTAATTTATT TGATTTCTATGGTAGCGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MSSSNNQALKTLRNRFLTGLAFVLPIGAALGLLIWVFNIIDGLLKPVIEFFFNWYFPGLGLLVTLVLIYLVGLILSNYFG KQILGWVDKILVKVPIFNQVYNSAKQVIETLGVSNKVSFKEAVMVEFPRTGMHSLAFITNETTNSAGEKLYLVYVPGSPN PTSGFLELLRENQIERVNVSVEDAMKTLISCGLVFPDNVQAIDVGKGDLHPNKL
Sequences:
>Translated_214_residues MSSSNNQALKTLRNRFLTGLAFVLPIGAALGLLIWVFNIIDGLLKPVIEFFFNWYFPGLGLLVTLVLIYLVGLILSNYFG KQILGWVDKILVKVPIFNQVYNSAKQVIETLGVSNKVSFKEAVMVEFPRTGMHSLAFITNETTNSAGEKLYLVYVPGSPN PTSGFLELLRENQIERVNVSVEDAMKTLISCGLVFPDNVQAIDVGKGDLHPNKL >Mature_213_residues SSSNNQALKTLRNRFLTGLAFVLPIGAALGLLIWVFNIIDGLLKPVIEFFFNWYFPGLGLLVTLVLIYLVGLILSNYFGK QILGWVDKILVKVPIFNQVYNSAKQVIETLGVSNKVSFKEAVMVEFPRTGMHSLAFITNETTNSAGEKLYLVYVPGSPNP TSGFLELLRENQIERVNVSVEDAMKTLISCGLVFPDNVQAIDVGKGDLHPNKL
Specific function: Unknown
COG id: COG2928
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23694; Mature: 23563
Theoretical pI: Translated: 8.42; Mature: 8.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSNNQALKTLRNRFLTGLAFVLPIGAALGLLIWVFNIIDGLLKPVIEFFFNWYFPGLG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH LLVTLVLIYLVGLILSNYFGKQILGWVDKILVKVPIFNQVYNSAKQVIETLGVSNKVSFK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHH EAVMVEFPRTGMHSLAFITNETTNSAGEKLYLVYVPGSPNPTSGFLELLRENQIERVNVS HHHHHCCCCCCHHHHHHEECCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCHHHCCCC VEDAMKTLISCGLVFPDNVQAIDVGKGDLHPNKL HHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCC >Mature Secondary Structure SSSNNQALKTLRNRFLTGLAFVLPIGAALGLLIWVFNIIDGLLKPVIEFFFNWYFPGLG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH LLVTLVLIYLVGLILSNYFGKQILGWVDKILVKVPIFNQVYNSAKQVIETLGVSNKVSFK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHH EAVMVEFPRTGMHSLAFITNETTNSAGEKLYLVYVPGSPNPTSGFLELLRENQIERVNVS HHHHHCCCCCCHHHHHHEECCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCHHHCCCC VEDAMKTLISCGLVFPDNVQAIDVGKGDLHPNKL HHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA