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The map label for this gene is recJ [H]

Identifier: 57234225

GI number: 57234225

Start: 882899

End: 884599

Strand: Direct

Name: recJ [H]

Synonym: DET0964

Alternate gene names: 57234225

Gene position: 882899-884599 (Clockwise)

Preceding gene: 57234226

Following gene: 57234224

Centisome position: 60.07

GC content: 52.73

Gene sequence:

>1701_bases
ATGAAAATATTGGCTAACTGCCTCTGGAAGCTAAAACCGGCGCCTCCGGAAGAGACCAGCCAGAATTTCCCTTATCCGCC
CCTGATTACCAGTCTGCTTTACAACCGGGGTATCAAAACCCCTGAAGAAGCTGATATGTTTCTGTCACCCGACAGACGTT
TAGACCATGACCCGTTTTTATTTCCTGATATGGAAAAGGCGGTCAGCCGTATTTACAAAGCCCTGCTGACAGGTGAAAAA
ATGGTGGTATACGGTGATTTTGACGCTGACGGGCTGACGGCAACAGCCGTCCTGACTACGGGTATTGCCCGTCTAGGCGG
AAATGTAGCCCCCTATATACCCCACCGCATCACCGAAGGTTACGGGCTGAAGATATCCGCCCTTGAAAAACACAAAGCCG
AGGGTGCTTCACTTATCATCAGCACAGACTGCGGCATTACCGCCATACCCGAAATCAAACGGGCAAATAAAATAGGGCTG
GACGTGATAGTTACCGACCATCACACTCCGCTTGATGAACTGCCGCCTGCACATGCCATTATAAACCCCAAAGTACCCGG
CTCAGCCTACCCGTTTAAAGAACTGGCCGGGGTGGGCGTGGCTTATAAAGTTATACAGGCTTTGTACCGCAATCTGGGGC
GGGAAAGTGAAGCCAGAGACCTGCTGGACCTGGTAGCCATCGGCACGGTTGCGGATATTGTACCCATTCTGGACGAAAAC
CGTTATCTGGTAAAGGAAGGCGTAAAACGCCTGAATGCAGAGCCGCGTCCCGGTATAGTAGAAATGGCCCAGCTGAGCCG
CCTGCGTCTGGGGGAAATAGAGCCGGAAAGCATTTCCTGGATAATGGCGCCCCGCCTCAATGCCGCCGGGCGTCTGGAGC
ACGCTATGGCCGGGTACAAACTCTTAACCTCCACGGCTATAAGTGATTCCCAGGAACTGGCTCTCTGGCTGGAAAACAAG
AACACCGAACGCCAGCAATTAACTGTCCGTTTTGTGGAAAAAGCCAGAGCCAGGCTGGACAGCCAATCACCTCCCTCCCT
GCTGGTATACAGTGATGCCGAATGCCCCCAGGGTATCAGCGGGCTGGTGGCCGGCAGACTCTCAGACGAATACTACCGCC
CGTCTATTGTCATCAAGACCAATGCGGACTTTGCCACCGGCAGCTGCCGGAGTATACCGGATTTCAATATTATTCAGGCA
CTCAGCCGCTTTGCCCCTTTGTTCAGCCATTTCGGCGGGCATGCCCAGGCAGCCGGCTTCACCTTGCCCACAGAACATCT
GGATACGTTTATAAAGGGTATATCCGCCTATGCCGAAGAAAGCCTAAGCGGGGTAGAGCTGAAACCCTTTATAGATATTG
ATATAGATACAGACCTAAGCCAGCTCTGTCCGGCTACCCTGCGCGAACTTGAACGGCTGGCCCCCTTCGGGGAAGCAAAC
CCCAAACCCGTATTCCTCAGCCGGGGGCTGAATATTACAGATTACCGCTCCATGGGCAGCAACAACGAGCACCTGAAACT
GCGGATAAAACATAAAGGTCGCTTCTGGGACGGAATAGCCTTCCGCCAGTTTAAGGAACTGAACGGTTTTCTCCAATCTC
CGGTGGATATAGTGTATAATCTGGAACTGGATAAATGGTGCGGGACAGACACGCTCCGCTTAAAGATAATTGACATGGCC
CCCGCAGGCACCAAGATTTAG

Upstream 100 bases:

>100_bases
ACCCCCAACACCGCCCGCAGAGCCAAGGTAAGGGTGGCGCTTAATAATTCATTCGGTTTCGGCGGGCATAATTCGGTGCT
TATCCTCAGGGAAATGGGTG

Downstream 100 bases:

>100_bases
TAAAAAGGTGAGCAAATGAACAGCTTGATAATGGTTATAATCGCCCTCATTGCCGCATATTTTATCGGCTCTACTCCTGC
CCCTTATCTGGCAGGGCGGA

Product: single-stranded-DNA-specific exonuclease RecJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 566; Mature: 566

Protein sequence:

>566_residues
MKILANCLWKLKPAPPEETSQNFPYPPLITSLLYNRGIKTPEEADMFLSPDRRLDHDPFLFPDMEKAVSRIYKALLTGEK
MVVYGDFDADGLTATAVLTTGIARLGGNVAPYIPHRITEGYGLKISALEKHKAEGASLIISTDCGITAIPEIKRANKIGL
DVIVTDHHTPLDELPPAHAIINPKVPGSAYPFKELAGVGVAYKVIQALYRNLGRESEARDLLDLVAIGTVADIVPILDEN
RYLVKEGVKRLNAEPRPGIVEMAQLSRLRLGEIEPESISWIMAPRLNAAGRLEHAMAGYKLLTSTAISDSQELALWLENK
NTERQQLTVRFVEKARARLDSQSPPSLLVYSDAECPQGISGLVAGRLSDEYYRPSIVIKTNADFATGSCRSIPDFNIIQA
LSRFAPLFSHFGGHAQAAGFTLPTEHLDTFIKGISAYAEESLSGVELKPFIDIDIDTDLSQLCPATLRELERLAPFGEAN
PKPVFLSRGLNITDYRSMGSNNEHLKLRIKHKGRFWDGIAFRQFKELNGFLQSPVDIVYNLELDKWCGTDTLRLKIIDMA
PAGTKI

Sequences:

>Translated_566_residues
MKILANCLWKLKPAPPEETSQNFPYPPLITSLLYNRGIKTPEEADMFLSPDRRLDHDPFLFPDMEKAVSRIYKALLTGEK
MVVYGDFDADGLTATAVLTTGIARLGGNVAPYIPHRITEGYGLKISALEKHKAEGASLIISTDCGITAIPEIKRANKIGL
DVIVTDHHTPLDELPPAHAIINPKVPGSAYPFKELAGVGVAYKVIQALYRNLGRESEARDLLDLVAIGTVADIVPILDEN
RYLVKEGVKRLNAEPRPGIVEMAQLSRLRLGEIEPESISWIMAPRLNAAGRLEHAMAGYKLLTSTAISDSQELALWLENK
NTERQQLTVRFVEKARARLDSQSPPSLLVYSDAECPQGISGLVAGRLSDEYYRPSIVIKTNADFATGSCRSIPDFNIIQA
LSRFAPLFSHFGGHAQAAGFTLPTEHLDTFIKGISAYAEESLSGVELKPFIDIDIDTDLSQLCPATLRELERLAPFGEAN
PKPVFLSRGLNITDYRSMGSNNEHLKLRIKHKGRFWDGIAFRQFKELNGFLQSPVDIVYNLELDKWCGTDTLRLKIIDMA
PAGTKI
>Mature_566_residues
MKILANCLWKLKPAPPEETSQNFPYPPLITSLLYNRGIKTPEEADMFLSPDRRLDHDPFLFPDMEKAVSRIYKALLTGEK
MVVYGDFDADGLTATAVLTTGIARLGGNVAPYIPHRITEGYGLKISALEKHKAEGASLIISTDCGITAIPEIKRANKIGL
DVIVTDHHTPLDELPPAHAIINPKVPGSAYPFKELAGVGVAYKVIQALYRNLGRESEARDLLDLVAIGTVADIVPILDEN
RYLVKEGVKRLNAEPRPGIVEMAQLSRLRLGEIEPESISWIMAPRLNAAGRLEHAMAGYKLLTSTAISDSQELALWLENK
NTERQQLTVRFVEKARARLDSQSPPSLLVYSDAECPQGISGLVAGRLSDEYYRPSIVIKTNADFATGSCRSIPDFNIIQA
LSRFAPLFSHFGGHAQAAGFTLPTEHLDTFIKGISAYAEESLSGVELKPFIDIDIDTDLSQLCPATLRELERLAPFGEAN
PKPVFLSRGLNITDYRSMGSNNEHLKLRIKHKGRFWDGIAFRQFKELNGFLQSPVDIVYNLELDKWCGTDTLRLKIIDMA
PAGTKI

Specific function: Putative single-stranded-DNA-specific exonuclease. RecA thread formation during DNA double-strand break repair requires RecJ or AadAB [H]

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OB DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=568, Percent_Identity=32.3943661971831, Blast_Score=248, Evalue=9e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610
- InterPro:   IPR018779 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1; PF10141 ssDNA-exonuc_C [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 62569; Mature: 62569

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILANCLWKLKPAPPEETSQNFPYPPLITSLLYNRGIKTPEEADMFLSPDRRLDHDPFL
CCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCC
FPDMEKAVSRIYKALLTGEKMVVYGDFDADGLTATAVLTTGIARLGGNVAPYIPHRITEG
CCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCC
YGLKISALEKHKAEGASLIISTDCGITAIPEIKRANKIGLDVIVTDHHTPLDELPPAHAI
CCEEEEHHHHHCCCCCEEEEECCCCCEECCCHHCCCCCCEEEEEECCCCCHHHCCCCCEE
INPKVPGSAYPFKELAGVGVAYKVIQALYRNLGRESEARDLLDLVAIGTVADIVPILDEN
ECCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC
RYLVKEGVKRLNAEPRPGIVEMAQLSRLRLGEIEPESISWIMAPRLNAAGRLEHAMAGYK
CCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHH
LLTSTAISDSQELALWLENKNTERQQLTVRFVEKARARLDSQSPPSLLVYSDAECPQGIS
HHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHH
GLVAGRLSDEYYRPSIVIKTNADFATGSCRSIPDFNIIQALSRFAPLFSHFGGHAQAAGF
HHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
TLPTEHLDTFIKGISAYAEESLSGVELKPFIDIDIDTDLSQLCPATLRELERLAPFGEAN
CCCHHHHHHHHHHHHHHHHHCCCCCEECEEEEEECCCCHHHHCHHHHHHHHHHCCCCCCC
PKPVFLSRGLNITDYRSMGSNNEHLKLRIKHKGRFWDGIAFRQFKELNGFLQSPVDIVYN
CCCEEEECCCCCCHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEE
LELDKWCGTDTLRLKIIDMAPAGTKI
EEEHHHCCCCEEEEEEEEECCCCCCC
>Mature Secondary Structure
MKILANCLWKLKPAPPEETSQNFPYPPLITSLLYNRGIKTPEEADMFLSPDRRLDHDPFL
CCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCC
FPDMEKAVSRIYKALLTGEKMVVYGDFDADGLTATAVLTTGIARLGGNVAPYIPHRITEG
CCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCC
YGLKISALEKHKAEGASLIISTDCGITAIPEIKRANKIGLDVIVTDHHTPLDELPPAHAI
CCEEEEHHHHHCCCCCEEEEECCCCCEECCCHHCCCCCCEEEEEECCCCCHHHCCCCCEE
INPKVPGSAYPFKELAGVGVAYKVIQALYRNLGRESEARDLLDLVAIGTVADIVPILDEN
ECCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC
RYLVKEGVKRLNAEPRPGIVEMAQLSRLRLGEIEPESISWIMAPRLNAAGRLEHAMAGYK
CCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHH
LLTSTAISDSQELALWLENKNTERQQLTVRFVEKARARLDSQSPPSLLVYSDAECPQGIS
HHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHH
GLVAGRLSDEYYRPSIVIKTNADFATGSCRSIPDFNIIQALSRFAPLFSHFGGHAQAAGF
HHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
TLPTEHLDTFIKGISAYAEESLSGVELKPFIDIDIDTDLSQLCPATLRELERLAPFGEAN
CCCHHHHHHHHHHHHHHHHHCCCCCEECEEEEEECCCCHHHHCHHHHHHHHHHCCCCCCC
PKPVFLSRGLNITDYRSMGSNNEHLKLRIKHKGRFWDGIAFRQFKELNGFLQSPVDIVYN
CCCEEEECCCCCCHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEE
LELDKWCGTDTLRLKIIDMAPAGTKI
EEEHHHCCCCEEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]