| Definition | Dehalococcoides ethenogenes 195, complete genome. |
|---|---|
| Accession | NC_002936 |
| Length | 1,469,720 |
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The map label for this gene is 57234179
Identifier: 57234179
GI number: 57234179
Start: 952744
End: 954069
Strand: Direct
Name: 57234179
Synonym: DET1053
Alternate gene names: NA
Gene position: 952744-954069 (Clockwise)
Preceding gene: 57234181
Following gene: 57234168
Centisome position: 64.82
GC content: 50.45
Gene sequence:
>1326_bases ATGACCGATGAAACCGGCAAATCAGCCAAAGAATCCGCTGAAGAATATTTAAAAGTTACCCGCATAGCCTTAAAACAAGC TGAAGACCAGGCCAGAGCAGCCAAAAAAGCGGCTGAAAATGCGGCCAAAGACTCTCAGTCTGCTATAGACAAGGCCGATG CCGCTGCCAAACAGTATCAGGATAGTATGGAAAAATATACTGTCCTGTATGCTCAAAAAGCCGAGGAGGCCAGCCGCCGT TCTGAGGAAATGATAGCCAAATATACCGACCTGTTTGAAAAAGCCATAAAACGGGCAGACGACACCAGCCGCTGGGCAAA GGATAACTGCGAAGAGGCAGTTCGCCAGACCAAGGAAGCCATGCTTCGGATAGAAGATGCCACCCGCTCTGCCAAACAGT CTGCTTTAGACAGCACCCGCACCGCCAAGGAAATGAGTGAGGAATGCATACGTGCCTCCCGTGATGCCGTTTCCCAGTCT GATGAAACTATAGATATGCTGAAAAAGACGGCTGATGTGTCGGTAAGGGCTTCCGAATCTGCCCTGCTAAAAATGCAGGA AAACGGTGCCCGGATACGTGAAAATGTAGATACCAATGTAAAAAATGCCACCAAAGCTATAGCCGAAATGAACCAGCTCA GCCAGAACTCTTCGGCAGAAGTTTCAGCGCTCATAAACAGGCTTCAAGAGGAAATCCGCAAAGCCGAGGCCATGAATGCC CAGATGAAAAATCTGGTAGATTCCTCCAACGCTCATCTTAAAGAAACTGTAACCAGGGTTGAGGAAGTCCAGCAAAACAC CGTCCAGGCCGTAAAGCAGATACAGGAAACTTCCCGCAAGGCCGCCGATGATGCCAAAGCAGCTTCTGCCAAGGCTATTG AAGCCAGCTGCAAAGCTGCCCAGGAAGTCTCCCAAACCTGGATTGGGGTATTTAAAGAGTTTATCGGCAGTGTGGATACC TCAAAACAGATTATTGCCGCAGTTACCAAGCAGACAGCCGAAAAGCTGGATGCGGTAGCCAACGAACCGCCTGCCACCCG CCCGGCAATCTCACCCCGCCCCCCCCGCCAGATACAGGCCGTAACACCTGAAGCCGTAAAAGACGATGGCACAGCTGATG ATACTGATGAACAAACCGAAGCTTCATCAGAGGAAAACCCCTATTACTCCGAACCGGAAGAAAAGAACAACCGGGCAGAC TTCCCGGCCAAAGAAGTAAACGAGGCCACCCAGAACCGTCTGGAGTATCTGGCCAAAATGTATGCTGCCAATAAGGCCCG CCGTGATAATGAGCCGGGCTCTAAAAACGCAGAAGCTGACGATTAA
Upstream 100 bases:
>100_bases ACTGCCTGCCGTCTCAGAGCGGCCTTTTAAAGCGTTGCTATAGCGGATTTTTAATTGTAGAATAACTTGTCTGAAATTAC CAAATTAAATGAGGTGGAAT
Downstream 100 bases:
>100_bases ACTTCCGGCTTAAAATAAACCTGTATGCCAAGAGCCGTACTTTTGAAAGTACGGCTCTTTTTTATCAGAAATATAAGAGG GAATAAACCCTATCAGTCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 441; Mature: 440
Protein sequence:
>441_residues MTDETGKSAKESAEEYLKVTRIALKQAEDQARAAKKAAENAAKDSQSAIDKADAAAKQYQDSMEKYTVLYAQKAEEASRR SEEMIAKYTDLFEKAIKRADDTSRWAKDNCEEAVRQTKEAMLRIEDATRSAKQSALDSTRTAKEMSEECIRASRDAVSQS DETIDMLKKTADVSVRASESALLKMQENGARIRENVDTNVKNATKAIAEMNQLSQNSSAEVSALINRLQEEIRKAEAMNA QMKNLVDSSNAHLKETVTRVEEVQQNTVQAVKQIQETSRKAADDAKAASAKAIEASCKAAQEVSQTWIGVFKEFIGSVDT SKQIIAAVTKQTAEKLDAVANEPPATRPAISPRPPRQIQAVTPEAVKDDGTADDTDEQTEASSEENPYYSEPEEKNNRAD FPAKEVNEATQNRLEYLAKMYAANKARRDNEPGSKNAEADD
Sequences:
>Translated_441_residues MTDETGKSAKESAEEYLKVTRIALKQAEDQARAAKKAAENAAKDSQSAIDKADAAAKQYQDSMEKYTVLYAQKAEEASRR SEEMIAKYTDLFEKAIKRADDTSRWAKDNCEEAVRQTKEAMLRIEDATRSAKQSALDSTRTAKEMSEECIRASRDAVSQS DETIDMLKKTADVSVRASESALLKMQENGARIRENVDTNVKNATKAIAEMNQLSQNSSAEVSALINRLQEEIRKAEAMNA QMKNLVDSSNAHLKETVTRVEEVQQNTVQAVKQIQETSRKAADDAKAASAKAIEASCKAAQEVSQTWIGVFKEFIGSVDT SKQIIAAVTKQTAEKLDAVANEPPATRPAISPRPPRQIQAVTPEAVKDDGTADDTDEQTEASSEENPYYSEPEEKNNRAD FPAKEVNEATQNRLEYLAKMYAANKARRDNEPGSKNAEADD >Mature_440_residues TDETGKSAKESAEEYLKVTRIALKQAEDQARAAKKAAENAAKDSQSAIDKADAAAKQYQDSMEKYTVLYAQKAEEASRRS EEMIAKYTDLFEKAIKRADDTSRWAKDNCEEAVRQTKEAMLRIEDATRSAKQSALDSTRTAKEMSEECIRASRDAVSQSD ETIDMLKKTADVSVRASESALLKMQENGARIRENVDTNVKNATKAIAEMNQLSQNSSAEVSALINRLQEEIRKAEAMNAQ MKNLVDSSNAHLKETVTRVEEVQQNTVQAVKQIQETSRKAADDAKAASAKAIEASCKAAQEVSQTWIGVFKEFIGSVDTS KQIIAAVTKQTAEKLDAVANEPPATRPAISPRPPRQIQAVTPEAVKDDGTADDTDEQTEASSEENPYYSEPEEKNNRADF PAKEVNEATQNRLEYLAKMYAANKARRDNEPGSKNAEADD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48621; Mature: 48490
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDETGKSAKESAEEYLKVTRIALKQAEDQARAAKKAAENAAKDSQSAIDKADAAAKQYQ CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DSMEKYTVLYAQKAEEASRRSEEMIAKYTDLFEKAIKRADDTSRWAKDNCEEAVRQTKEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH MLRIEDATRSAKQSALDSTRTAKEMSEECIRASRDAVSQSDETIDMLKKTADVSVRASES HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEECCHH ALLKMQENGARIRENVDTNVKNATKAIAEMNQLSQNSSAEVSALINRLQEEIRKAEAMNA HHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH QMKNLVDSSNAHLKETVTRVEEVQQNTVQAVKQIQETSRKAADDAKAASAKAIEASCKAA HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QEVSQTWIGVFKEFIGSVDTSKQIIAAVTKQTAEKLDAVANEPPATRPAISPRPPRQIQA HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCC VTPEAVKDDGTADDTDEQTEASSEENPYYSEPEEKNNRADFPAKEVNEATQNRLEYLAKM CCCHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH YAANKARRDNEPGSKNAEADD HHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure TDETGKSAKESAEEYLKVTRIALKQAEDQARAAKKAAENAAKDSQSAIDKADAAAKQYQ CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DSMEKYTVLYAQKAEEASRRSEEMIAKYTDLFEKAIKRADDTSRWAKDNCEEAVRQTKEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH MLRIEDATRSAKQSALDSTRTAKEMSEECIRASRDAVSQSDETIDMLKKTADVSVRASES HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEECCHH ALLKMQENGARIRENVDTNVKNATKAIAEMNQLSQNSSAEVSALINRLQEEIRKAEAMNA HHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH QMKNLVDSSNAHLKETVTRVEEVQQNTVQAVKQIQETSRKAADDAKAASAKAIEASCKAA HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QEVSQTWIGVFKEFIGSVDTSKQIIAAVTKQTAEKLDAVANEPPATRPAISPRPPRQIQA HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCC VTPEAVKDDGTADDTDEQTEASSEENPYYSEPEEKNNRADFPAKEVNEATQNRLEYLAKM CCCHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH YAANKARRDNEPGSKNAEADD HHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA