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The map label for this gene is sdpR [H]

Identifier: 57233996

GI number: 57233996

Start: 1138637

End: 1138933

Strand: Direct

Name: sdpR [H]

Synonym: DET1247

Alternate gene names: 57233996

Gene position: 1138637-1138933 (Clockwise)

Preceding gene: 57234000

Following gene: 57233995

Centisome position: 77.47

GC content: 46.46

Gene sequence:

>297_bases
TTGGACAATCTGGTCTTCAAAGCCCTGTCAGACCCGAACCGGCGGCAGATACTGAAGCTTCTCAAAGATACCCCTTTAAG
TGCCGGTGAAATAAGCCGCCAGTTTGACCTGGCTTTATCCACCCTTTCGGGCCATTTTAAACTCCTCAAAGAAGCCGGGC
TGATACGGGAGGAGAAAAAGGGCAACCATATATTTTACAGCCTGAATACCTCGGTGCTGGAAGAGGTACTGAACCTGATG
ATGGAAATATTCAAAAAGGACAAACCAAACCTTCGCAATATAAAACAGGAAGGCTAA

Upstream 100 bases:

>100_bases
AAAATAAATGCCTGGCAGGTTTGGCTGTCTTTGACAAAAACCAGGCCTGATTATATACTATTTCGGTATATACCGAAATA
CTTTTTGGGAAGTGCAACCT

Downstream 100 bases:

>100_bases
TAATGCATATAAACTGGAAAGAACACCGCCTGAGTCTTTTTATTATACTGGCCATGTTTGTAACCGGGCTGATTACCTGG
CCTAATGCCCCGGACTTGCT

Product: ArsR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MDNLVFKALSDPNRRQILKLLKDTPLSAGEISRQFDLALSTLSGHFKLLKEAGLIREEKKGNHIFYSLNTSVLEEVLNLM
MEIFKKDKPNLRNIKQEG

Sequences:

>Translated_98_residues
MDNLVFKALSDPNRRQILKLLKDTPLSAGEISRQFDLALSTLSGHFKLLKEAGLIREEKKGNHIFYSLNTSVLEEVLNLM
MEIFKKDKPNLRNIKQEG
>Mature_98_residues
MDNLVFKALSDPNRRQILKLLKDTPLSAGEISRQFDLALSTLSGHFKLLKEAGLIREEKKGNHIFYSLNTSVLEEVLNLM
MEIFKKDKPNLRNIKQEG

Specific function: Represses the transcription of the sdpIR operon and of several other operons that probably contribute to delaying commitment to sporulation [H]

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 11241; Mature: 11241

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNLVFKALSDPNRRQILKLLKDTPLSAGEISRQFDLALSTLSGHFKLLKEAGLIREEKK
CCCCHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GNHIFYSLNTSVLEEVLNLMMEIFKKDKPNLRNIKQEG
CCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MDNLVFKALSDPNRRQILKLLKDTPLSAGEISRQFDLALSTLSGHFKLLKEAGLIREEKK
CCCCHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GNHIFYSLNTSVLEEVLNLMMEIFKKDKPNLRNIKQEG
CCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]