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The map label for this gene is rpmF

Identifier: 57233942

GI number: 57233942

Start: 1162115

End: 1162333

Strand: Direct

Name: rpmF

Synonym: DET1275

Alternate gene names: 57233942

Gene position: 1162115-1162333 (Clockwise)

Preceding gene: 57233943

Following gene: 57233934

Centisome position: 79.07

GC content: 57.08

Gene sequence:

>219_bases
ATGGCTCTACCTAAAAGAAGACTTTCCCATGCCCGCCAGGGTAACCGCCGCGCCCATGTCGCCCTGAGTGCCCCGGCTGT
AATGGAATGCCCCCAGTGCAACAGCCCCAAGCTCTCCCATCAGGCCTGTTCCGTCTGCGGTACTTACAACGGCCGGACAG
TGGTTGATGTGGACGCCATAGCCAAGAAAAAAGCTGACAAATCCAAGGGTCAGCAGTAA

Upstream 100 bases:

>100_bases
CGCGAAGGTGCTATAATGGCAACGCCCATGAAACCCCTGTGCTCCGGTGAGTGCCGCGGTTTTGAATATAAAACGAATAC
TAATTTAACGGAGTAAAATA

Downstream 100 bases:

>100_bases
TTTCTGTTGGCCGGTTTTAAGGCATGACTGAGATTAAAACAGCTTATGTCTTCCCCGGTCAGGGTGCCCAATTCGTGGGC
ATGGGCCGGGACTTGTATTC

Product: 50S ribosomal protein L32

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 72; Mature: 71

Protein sequence:

>72_residues
MALPKRRLSHARQGNRRAHVALSAPAVMECPQCNSPKLSHQACSVCGTYNGRTVVDVDAIAKKKADKSKGQQ

Sequences:

>Translated_72_residues
MALPKRRLSHARQGNRRAHVALSAPAVMECPQCNSPKLSHQACSVCGTYNGRTVVDVDAIAKKKADKSKGQQ
>Mature_71_residues
ALPKRRLSHARQGNRRAHVALSAPAVMECPQCNSPKLSHQACSVCGTYNGRTVVDVDAIAKKKADKSKGQQ

Specific function: Unknown

COG id: COG0333

COG function: function code J; Ribosomal protein L32

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L32P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL32_DEHE1 (Q3Z712)

Other databases:

- EMBL:   CP000027
- RefSeq:   YP_181987.1
- ProteinModelPortal:   Q3Z712
- SMR:   Q3Z712
- STRING:   Q3Z712
- GeneID:   3229407
- GenomeReviews:   CP000027_GR
- KEGG:   det:DET1275
- NMPDR:   fig|243164.3.peg.1267
- TIGR:   DET1275
- eggNOG:   COG0333
- HOGENOM:   HBG728381
- OMA:   MAKHPVP
- ProtClustDB:   PRK12286
- BioCyc:   DETH243164:DET_1275-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_00340
- InterPro:   IPR002677
- InterPro:   IPR011332
- TIGRFAMs:   TIGR01031

Pfam domain/function: PF01783 Ribosomal_L32p; SSF57829 Ribosomal_zn-bd

EC number: NA

Molecular weight: Translated: 7772; Mature: 7641

Theoretical pI: Translated: 10.71; Mature: 10.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
5.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALPKRRLSHARQGNRRAHVALSAPAVMECPQCNSPKLSHQACSVCGTYNGRTVVDVDAI
CCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEHHHH
AKKKADKSKGQQ
HHHHCCCCCCCC
>Mature Secondary Structure 
ALPKRRLSHARQGNRRAHVALSAPAVMECPQCNSPKLSHQACSVCGTYNGRTVVDVDAI
CCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEHHHH
AKKKADKSKGQQ
HHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA