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The map label for this gene is gatC

Identifier: 57233938

GI number: 57233938

Start: 1207446

End: 1207733

Strand: Direct

Name: gatC

Synonym: DET1334

Alternate gene names: 57233938

Gene position: 1207446-1207733 (Clockwise)

Preceding gene: 57233950

Following gene: 57233937

Centisome position: 82.15

GC content: 51.04

Gene sequence:

>288_bases
ATGAAGCTAAACCGCGAAGATGTACTCCACATTGCCCGCTTGGCTAAACTGGGGCTGGAGGAAGATGAAATAAACCGCTT
GAGTAAAGAGCTTTCGGCCTTGCTGGAGCATTTTGAGGTACTGCAGCAGGTGGATACCACCGGCGTAGAGCCGACCGCCC
AATCCACCCCGGTTAAAAGCGTACTTAAAGAGGATATTATAAAGCCCTCTTATGACCGTGAGGAGATACTTTCAAATGCC
CCCAGACGCGAGGGTGATTACGTGCGGATACGGGCGGTGATGGAATAA

Upstream 100 bases:

>100_bases
ATACCAACAACCCCCGTACCTTAATACAACCAAAAGGGGGCTTTGTTGCCCGTATTTGGCGGCGGTGTTATAATCTGGGG
ACTTGTAAACGGGGGATATT

Downstream 100 bases:

>100_bases
TGACAGATTTAATCAAGCTGACCATTGCCCAGTCCCACAAACTGCTGAAAGAACGGAAACTGTCATCCGCCGAGCTTACC
CGAGCCCATCTGGACAGGAT

Product: glutamyl-tRNA(Gln) amidotransferase, C subunit

Products: NA

Alternate protein names: Asp/Glu-ADT subunit C

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MKLNREDVLHIARLAKLGLEEDEINRLSKELSALLEHFEVLQQVDTTGVEPTAQSTPVKSVLKEDIIKPSYDREEILSNA
PRREGDYVRIRAVME

Sequences:

>Translated_95_residues
MKLNREDVLHIARLAKLGLEEDEINRLSKELSALLEHFEVLQQVDTTGVEPTAQSTPVKSVLKEDIIKPSYDREEILSNA
PRREGDYVRIRAVME
>Mature_95_residues
MKLNREDVLHIARLAKLGLEEDEINRLSKELSALLEHFEVLQQVDTTGVEPTAQSTPVKSVLKEDIIKPSYDREEILSNA
PRREGDYVRIRAVME

Specific function: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction take

COG id: COG0721

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gatC family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GATC_DEHE1 (Q3Z6V4)

Other databases:

- EMBL:   CP000027
- RefSeq:   YP_182045.1
- ProteinModelPortal:   Q3Z6V4
- SMR:   Q3Z6V4
- STRING:   Q3Z6V4
- GeneID:   3229403
- GenomeReviews:   CP000027_GR
- KEGG:   det:DET1334
- NMPDR:   fig|243164.3.peg.1289
- TIGR:   DET1334
- eggNOG:   COG0721
- HOGENOM:   HBG586403
- OMA:   KDVAYIA
- ProtClustDB:   CLSK837004
- BioCyc:   DETH243164:DET_1334-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_00122
- InterPro:   IPR003837
- TIGRFAMs:   TIGR00135

Pfam domain/function: PF02686 Glu-tRNAGln

EC number: 6.3.5.-

Molecular weight: Translated: 10886; Mature: 10886

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLNREDVLHIARLAKLGLEEDEINRLSKELSALLEHFEVLQQVDTTGVEPTAQSTPVKS
CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH
VLKEDIIKPSYDREEILSNAPRREGDYVRIRAVME
HHHHHHCCCCCCHHHHHHCCCCCCCCEEEEEEECC
>Mature Secondary Structure
MKLNREDVLHIARLAKLGLEEDEINRLSKELSALLEHFEVLQQVDTTGVEPTAQSTPVKS
CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH
VLKEDIIKPSYDREEILSNAPRREGDYVRIRAVME
HHHHHHCCCCCCHHHHHHCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA