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The map label for this gene is 57233927

Identifier: 57233927

GI number: 57233927

Start: 1210179

End: 1210388

Strand: Direct

Name: 57233927

Synonym: DET1338

Alternate gene names: NA

Gene position: 1210179-1210388 (Clockwise)

Preceding gene: 57233935

Following gene: 57233926

Centisome position: 82.34

GC content: 44.76

Gene sequence:

>210_bases
ATGCAAAATAAACTCCGGGTTTTAAGAGCCATACACAACCTTACTCAGGAGGAACTGGCGGACAAACTGGGTATAACCCG
CCAGACCGTTATCGCTATAGAGTGGGGAAAGTACTCCCCCTCCCTGGAGCTGGCTTTCAAGATAGCTTCCCTTTTCAAAG
CACCAATAGAAGAAATATTTACATACAATACTGAACAGGAAAGGCAATGA

Upstream 100 bases:

>100_bases
CCTCTTCTCCCGAATACTGGCTGCTGGTAGGCATGGCCTTATTCTTTATTTTGCTGTATGACCTGGCTAATCTGTATTAC
CGGAATAAAATGTAAATATT

Downstream 100 bases:

>100_bases
TAGAAGTAAACAACCTTAGCAAAACCTTCAAGGGCAAAACAGTACTGGATAATATCAGTTTCAGTGTAGCTCCGGGGGAA
ATATTCGGTTTTCTGGGGCC

Product: DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 69; Mature: 69

Protein sequence:

>69_residues
MQNKLRVLRAIHNLTQEELADKLGITRQTVIAIEWGKYSPSLELAFKIASLFKAPIEEIFTYNTEQERQ

Sequences:

>Translated_69_residues
MQNKLRVLRAIHNLTQEELADKLGITRQTVIAIEWGKYSPSLELAFKIASLFKAPIEEIFTYNTEQERQ
>Mature_69_residues
MQNKLRVLRAIHNLTQEELADKLGITRQTVIAIEWGKYSPSLELAFKIASLFKAPIEEIFTYNTEQERQ

Specific function: Unknown

COG id: COG1476

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 8034; Mature: 8034

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNKLRVLRAIHNLTQEELADKLGITRQTVIAIEWGKYSPSLELAFKIASLFKAPIEEIF
CCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH
TYNTEQERQ
CCCCCCCCC
>Mature Secondary Structure
MQNKLRVLRAIHNLTQEELADKLGITRQTVIAIEWGKYSPSLELAFKIASLFKAPIEEIF
CCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH
TYNTEQERQ
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]